Strain Fitness in Pseudomonas putida KT2440 around PP_1678

Experiment: Isobutyl alcohol 0.6 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Isobutyl alcohol 0.6 vol%
1,872,388	+		PP_1677	0.46	+1.7
1,872,462	-		PP_1677	0.51	+0.6
1,872,462	-		PP_1677	0.51	-0.9
1,872,696	+		PP_1677	0.67	+1.1
1,872,793	+		PP_1677	0.74	+0.7
1,872,794	-		PP_1677	0.74	+1.6
1,872,875	-		PP_1677	0.80	-0.3
1,872,988	+		PP_1677	0.87	+0.3
1,872,988	+		PP_1677	0.87	-1.1
1,872,988	+		PP_1677	0.87	+1.3
1,872,989	-		PP_1677	0.87	+0.1
1,873,073	-				-0.1
1,873,073	-				+1.1
1,873,178	-				-0.5
1,873,259	+		PP_1678	0.17	-1.3
1,873,259	+		PP_1678	0.17	+0.1
1,873,586	+		PP_1678	0.79	-1.2
1,873,586	+		PP_1678	0.79	-0.8
1,873,586	+		PP_1678	0.79	-1.6
1,873,587	-		PP_1678	0.80	-0.1
1,873,668	+				-1.4
1,873,668	+				+0.6
1,873,669	-				-0.7
1,873,669	-				+0.9
1,873,689	+				-0.3
1,873,689	+				-1.2
1,873,689	+				+0.4
1,873,689	+				-2.7
1,873,689	+				+1.1
1,873,689	+				-0.1
1,873,690	-				+0.7
1,873,690	-				-0.3
1,874,437	+		PP_1679	0.71	-0.4
1,874,484	+		PP_1679	0.75	+1.3
1,874,485	-		PP_1679	0.75	+0.7
1,874,485	-		PP_1679	0.75	-1.2