Experiment: Isobutyl alcohol 0.6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0366 and PP_0367 are separated by 173 nucleotides PP_0367 and PP_0368 are separated by 287 nucleotides PP_0368 and PP_0369 are separated by 301 nucleotides
PP_0366: PP_0366 - dethiobiotin synthetase, at 443,838 to 444,518
_0366
PP_0367: PP_0367 - conserved protein of unknown function, at 444,692 to 445,027
_0367
PP_0368: PP_0368 - putative Acyl-CoA dehydrogenase, at 445,315 to 447,120
_0368
PP_0369: PP_0369 - putative diguanylate cyclase, at 447,422 to 448,705
_0369
Position (kb)
445
446
447
448 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 444.517 kb on - strand at 444.517 kb on - strand at 444.517 kb on - strand at 444.517 kb on - strand at 444.559 kb on + strand at 444.594 kb on - strand at 444.630 kb on + strand at 444.631 kb on - strand at 444.659 kb on + strand at 444.659 kb on + strand at 444.679 kb on + strand at 444.690 kb on - strand at 444.758 kb on + strand, within PP_0367 at 444.758 kb on + strand, within PP_0367 at 444.758 kb on + strand, within PP_0367 at 444.758 kb on + strand, within PP_0367 at 444.758 kb on + strand, within PP_0367 at 444.759 kb on - strand, within PP_0367 at 444.759 kb on - strand, within PP_0367 at 444.850 kb on + strand, within PP_0367 at 445.019 kb on + strand at 445.019 kb on + strand at 445.019 kb on + strand at 445.020 kb on - strand at 445.020 kb on - strand at 445.020 kb on - strand at 445.030 kb on - strand at 445.030 kb on - strand at 445.045 kb on + strand at 445.045 kb on + strand at 445.046 kb on - strand at 445.064 kb on + strand at 445.065 kb on - strand at 445.065 kb on - strand at 445.065 kb on - strand at 445.145 kb on + strand at 445.145 kb on + strand at 445.206 kb on - strand at 445.239 kb on - strand at 445.300 kb on + strand at 445.325 kb on - strand at 445.375 kb on + strand at 445.387 kb on + strand at 445.551 kb on + strand, within PP_0368 at 445.552 kb on - strand, within PP_0368 at 445.689 kb on + strand, within PP_0368 at 445.693 kb on + strand, within PP_0368 at 445.725 kb on + strand, within PP_0368 at 445.726 kb on - strand, within PP_0368 at 445.762 kb on + strand, within PP_0368 at 445.762 kb on + strand, within PP_0368 at 445.763 kb on - strand, within PP_0368 at 445.879 kb on + strand, within PP_0368 at 445.879 kb on + strand, within PP_0368 at 445.880 kb on - strand, within PP_0368 at 445.947 kb on + strand, within PP_0368 at 446.101 kb on - strand, within PP_0368 at 446.106 kb on + strand, within PP_0368 at 446.107 kb on - strand, within PP_0368 at 446.140 kb on + strand, within PP_0368 at 446.407 kb on + strand, within PP_0368 at 446.408 kb on - strand, within PP_0368 at 446.408 kb on - strand, within PP_0368 at 446.408 kb on - strand, within PP_0368 at 446.408 kb on - strand, within PP_0368 at 446.440 kb on + strand, within PP_0368 at 446.441 kb on - strand, within PP_0368 at 446.553 kb on - strand, within PP_0368 at 446.619 kb on + strand, within PP_0368 at 446.619 kb on + strand, within PP_0368 at 446.619 kb on + strand, within PP_0368 at 446.620 kb on - strand, within PP_0368 at 446.620 kb on - strand, within PP_0368 at 446.620 kb on - strand, within PP_0368 at 446.620 kb on - strand, within PP_0368 at 446.620 kb on - strand, within PP_0368 at 446.620 kb on - strand, within PP_0368 at 446.632 kb on + strand, within PP_0368 at 446.633 kb on - strand, within PP_0368 at 446.881 kb on + strand, within PP_0368 at 446.891 kb on - strand, within PP_0368 at 446.891 kb on - strand, within PP_0368 at 446.891 kb on - strand at 446.899 kb on + strand, within PP_0368 at 446.899 kb on + strand, within PP_0368 at 446.915 kb on - strand, within PP_0368 at 446.915 kb on - strand, within PP_0368 at 446.983 kb on + strand at 446.984 kb on - strand at 447.013 kb on + strand at 447.013 kb on + strand at 447.013 kb on + strand at 447.036 kb on + strand at 447.115 kb on + strand at 447.115 kb on + strand at 447.115 kb on + strand at 447.116 kb on - strand at 447.116 kb on - strand at 447.122 kb on - strand at 447.202 kb on - strand at 447.213 kb on + strand at 447.279 kb on + strand at 447.280 kb on - strand at 447.302 kb on - strand at 447.394 kb on + strand at 447.395 kb on - strand at 447.417 kb on + strand at 447.500 kb on + strand at 447.501 kb on - strand at 447.501 kb on - strand at 447.501 kb on - strand at 447.501 kb on - strand at 447.550 kb on + strand at 447.551 kb on - strand, within PP_0369 at 447.579 kb on - strand, within PP_0369 at 447.588 kb on + strand, within PP_0369 at 447.589 kb on - strand, within PP_0369 at 447.590 kb on + strand, within PP_0369 at 447.590 kb on + strand, within PP_0369 at 447.591 kb on - strand at 447.629 kb on + strand, within PP_0369 at 447.629 kb on + strand, within PP_0369 at 447.630 kb on - strand, within PP_0369 at 447.630 kb on - strand, within PP_0369 at 447.630 kb on - strand, within PP_0369 at 447.638 kb on + strand, within PP_0369 at 447.668 kb on + strand, within PP_0369 at 447.669 kb on - strand, within PP_0369 at 447.669 kb on - strand, within PP_0369 at 447.753 kb on - strand, within PP_0369 at 447.753 kb on - strand, within PP_0369 at 447.772 kb on + strand, within PP_0369 at 447.772 kb on + strand, within PP_0369 at 447.773 kb on - strand at 447.773 kb on - strand, within PP_0369 at 447.773 kb on - strand, within PP_0369 at 447.773 kb on - strand, within PP_0369 at 447.773 kb on - strand, within PP_0369 at 447.938 kb on + strand, within PP_0369 at 447.939 kb on - strand, within PP_0369 at 447.980 kb on + strand, within PP_0369 at 447.980 kb on + strand, within PP_0369 at 447.980 kb on + strand, within PP_0369 at 447.981 kb on - strand, within PP_0369 at 447.981 kb on - strand, within PP_0369 at 448.073 kb on - strand, within PP_0369
Per-strain Table
Position Strand Gene LocusTag Fraction Isobutyl alcohol 0.6 vol% remove 444,517 - +0.3 444,517 - -0.4 444,517 - +0.1 444,517 - +0.2 444,559 + +0.3 444,594 - +0.4 444,630 + -0.3 444,631 - +0.4 444,659 + +0.8 444,659 + +0.5 444,679 + -0.4 444,690 - +0.7 444,758 + PP_0367 0.20 +0.4 444,758 + PP_0367 0.20 -1.3 444,758 + PP_0367 0.20 +0.2 444,758 + PP_0367 0.20 +0.6 444,758 + PP_0367 0.20 +0.4 444,759 - PP_0367 0.20 +0.5 444,759 - PP_0367 0.20 +0.0 444,850 + PP_0367 0.47 +0.4 445,019 + -1.1 445,019 + -1.2 445,019 + +0.2 445,020 - +1.4 445,020 - -0.3 445,020 - +0.0 445,030 - +0.4 445,030 - -0.0 445,045 + -0.1 445,045 + -1.0 445,046 - +0.4 445,064 + +0.6 445,065 - -0.3 445,065 - -0.0 445,065 - -0.5 445,145 + -0.7 445,145 + -0.0 445,206 - -0.6 445,239 - -0.5 445,300 + -0.0 445,325 - -1.8 445,375 + +0.4 445,387 + -0.9 445,551 + PP_0368 0.13 -0.6 445,552 - PP_0368 0.13 -2.6 445,689 + PP_0368 0.21 -1.2 445,693 + PP_0368 0.21 -0.2 445,725 + PP_0368 0.23 -2.4 445,726 - PP_0368 0.23 -0.6 445,762 + PP_0368 0.25 -0.5 445,762 + PP_0368 0.25 +0.1 445,763 - PP_0368 0.25 +0.2 445,879 + PP_0368 0.31 +0.4 445,879 + PP_0368 0.31 -1.0 445,880 - PP_0368 0.31 -2.1 445,947 + PP_0368 0.35 -2.7 446,101 - PP_0368 0.44 -0.0 446,106 + PP_0368 0.44 -1.7 446,107 - PP_0368 0.44 -2.3 446,140 + PP_0368 0.46 -0.4 446,407 + PP_0368 0.60 -3.5 446,408 - PP_0368 0.61 -3.7 446,408 - PP_0368 0.61 -1.9 446,408 - PP_0368 0.61 -0.3 446,408 - PP_0368 0.61 -1.6 446,440 + PP_0368 0.62 -2.4 446,441 - PP_0368 0.62 -1.2 446,553 - PP_0368 0.69 -0.5 446,619 + PP_0368 0.72 -2.5 446,619 + PP_0368 0.72 -2.1 446,619 + PP_0368 0.72 -0.8 446,620 - PP_0368 0.72 -1.8 446,620 - PP_0368 0.72 -2.2 446,620 - PP_0368 0.72 -1.9 446,620 - PP_0368 0.72 -0.7 446,620 - PP_0368 0.72 -1.4 446,620 - PP_0368 0.72 -0.6 446,632 + PP_0368 0.73 -0.2 446,633 - PP_0368 0.73 -0.9 446,881 + PP_0368 0.87 -1.7 446,891 - PP_0368 0.87 -0.4 446,891 - PP_0368 0.87 -3.6 446,891 - -0.6 446,899 + PP_0368 0.88 -1.0 446,899 + PP_0368 0.88 +0.0 446,915 - PP_0368 0.89 +0.3 446,915 - PP_0368 0.89 -2.0 446,983 + -1.3 446,984 - -4.1 447,013 + -1.2 447,013 + -3.0 447,013 + +1.0 447,036 + +0.1 447,115 + -0.6 447,115 + -0.6 447,115 + -0.3 447,116 - +0.4 447,116 - -1.1 447,122 - +0.8 447,202 - +0.4 447,213 + +0.7 447,279 + -0.5 447,280 - -1.0 447,302 - +0.3 447,394 + +0.2 447,395 - +0.9 447,417 + +0.2 447,500 + +0.1 447,501 - +0.7 447,501 - -0.1 447,501 - -2.2 447,501 - -0.1 447,550 + -0.4 447,551 - PP_0369 0.10 -0.4 447,579 - PP_0369 0.12 +1.9 447,588 + PP_0369 0.13 -0.1 447,589 - PP_0369 0.13 -1.1 447,590 + PP_0369 0.13 +0.6 447,590 + PP_0369 0.13 -0.8 447,591 - +1.4 447,629 + PP_0369 0.16 -0.1 447,629 + PP_0369 0.16 +0.1 447,630 - PP_0369 0.16 -1.2 447,630 - PP_0369 0.16 +0.2 447,630 - PP_0369 0.16 +0.8 447,638 + PP_0369 0.17 -0.6 447,668 + PP_0369 0.19 -0.3 447,669 - PP_0369 0.19 -2.2 447,669 - PP_0369 0.19 +0.1 447,753 - PP_0369 0.26 -0.1 447,753 - PP_0369 0.26 +2.7 447,772 + PP_0369 0.27 +0.4 447,772 + PP_0369 0.27 +0.9 447,773 - -0.6 447,773 - PP_0369 0.27 +0.2 447,773 - PP_0369 0.27 +0.2 447,773 - PP_0369 0.27 +0.4 447,773 - PP_0369 0.27 +0.3 447,938 + PP_0369 0.40 -1.0 447,939 - PP_0369 0.40 +1.6 447,980 + PP_0369 0.43 -0.3 447,980 + PP_0369 0.43 -1.5 447,980 + PP_0369 0.43 +0.7 447,981 - PP_0369 0.44 -0.4 447,981 - PP_0369 0.44 -0.1 448,073 - PP_0369 0.51 +0.8
Or see this region's nucleotide sequence