Experiment: LB_plus_SM_buffer with 6F2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2570 and GFF2571 overlap by 4 nucleotides GFF2571 and GFF2572 are separated by 105 nucleotides GFF2572 and GFF2573 are separated by 35 nucleotides
GFF2570 - Respiratory nitrate reductase delta chain (EC 1.7.99.4), at 91,586 to 92,281
GFF2570
GFF2571 - Respiratory nitrate reductase gamma chain (EC 1.7.99.4), at 92,278 to 92,958
GFF2571
GFF2572 - Phenazine biosynthesis protein PhzF, at 93,064 to 93,957
GFF2572
GFF2573 - N-hydroxyarylamine O-acetyltransferase (EC 2.3.1.118), at 93,993 to 94,838
GFF2573
Position (kb)
93
94 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 92.206 kb on - strand, within GFF2570 at 92.288 kb on - strand at 92.288 kb on - strand at 92.322 kb on + strand at 92.377 kb on + strand, within GFF2571 at 92.378 kb on - strand, within GFF2571 at 92.379 kb on + strand, within GFF2571 at 92.449 kb on - strand, within GFF2571 at 92.509 kb on + strand, within GFF2571 at 92.510 kb on - strand, within GFF2571 at 92.510 kb on - strand, within GFF2571 at 92.579 kb on + strand, within GFF2571 at 92.580 kb on - strand, within GFF2571 at 92.580 kb on - strand, within GFF2571 at 92.604 kb on - strand, within GFF2571 at 92.659 kb on - strand, within GFF2571 at 92.661 kb on + strand, within GFF2571 at 92.662 kb on - strand, within GFF2571 at 92.775 kb on + strand, within GFF2571 at 92.776 kb on - strand, within GFF2571 at 93.032 kb on + strand at 93.153 kb on - strand at 93.242 kb on + strand, within GFF2572 at 93.242 kb on + strand, within GFF2572 at 93.248 kb on - strand, within GFF2572 at 93.263 kb on + strand, within GFF2572 at 93.305 kb on - strand, within GFF2572 at 93.320 kb on + strand, within GFF2572 at 93.404 kb on - strand, within GFF2572 at 93.450 kb on - strand, within GFF2572 at 93.450 kb on - strand, within GFF2572 at 94.123 kb on - strand, within GFF2573 at 94.693 kb on - strand, within GFF2573
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 6F2_phage 15 MOI remove 92,206 - GFF2570 0.89 +1.3 92,288 - -0.1 92,288 - -0.6 92,322 + -0.1 92,377 + GFF2571 0.15 -0.9 92,378 - GFF2571 0.15 -0.1 92,379 + GFF2571 0.15 -1.3 92,449 - GFF2571 0.25 -0.5 92,509 + GFF2571 0.34 +0.4 92,510 - GFF2571 0.34 -0.3 92,510 - GFF2571 0.34 -0.6 92,579 + GFF2571 0.44 -0.5 92,580 - GFF2571 0.44 +0.5 92,580 - GFF2571 0.44 +0.3 92,604 - GFF2571 0.48 -0.4 92,659 - GFF2571 0.56 +0.9 92,661 + GFF2571 0.56 -0.2 92,662 - GFF2571 0.56 +0.1 92,775 + GFF2571 0.73 -1.9 92,776 - GFF2571 0.73 +1.0 93,032 + -0.2 93,153 - -0.8 93,242 + GFF2572 0.20 -1.4 93,242 + GFF2572 0.20 -3.2 93,248 - GFF2572 0.21 -0.5 93,263 + GFF2572 0.22 -0.0 93,305 - GFF2572 0.27 +1.7 93,320 + GFF2572 0.29 -2.3 93,404 - GFF2572 0.38 +0.2 93,450 - GFF2572 0.43 +0.9 93,450 - GFF2572 0.43 -1.0 94,123 - GFF2573 0.15 -0.4 94,693 - GFF2573 0.83 -0.6
Or see this region's nucleotide sequence