Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3417
Experiment: LB_plus_SM_buffer with 6D2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB_plus_SM_buffer with 6D2_phage 15 MOI |
|---|---|---|---|---|---|
| remove | |||||
| 182,982 | - | GFF3417 | 0.11 | -0.2 | |
| 183,143 | - | GFF3417 | 0.36 | -0.7 | |
| 183,166 | - | GFF3417 | 0.39 | -0.5 | |
| 183,234 | - | GFF3417 | 0.50 | -0.5 | |
| 183,291 | - | GFF3417 | 0.59 | -1.4 | |
| 183,291 | - | GFF3417 | 0.59 | -1.4 | |
| 183,405 | - | GFF3417 | 0.77 | -2.1 | |
| 183,572 | - | +0.6 |
Or see this region's nucleotide sequence