Experiment: m.b. 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2262 and B158DRAFT_2263 are separated by 19 nucleotides B158DRAFT_2263 and B158DRAFT_2264 are separated by 54 nucleotides B158DRAFT_2264 and B158DRAFT_2265 are separated by 104 nucleotides
B158DRAFT_2262: B158DRAFT_2262 - 16S rRNA processing protein RimM, at 425,877 to 426,398
_2262
B158DRAFT_2263: B158DRAFT_2263 - tRNA (guanine-N1)-methyltransferase, at 426,418 to 427,185
_2263
B158DRAFT_2264: B158DRAFT_2264 - ribosomal protein L19, bacterial type, at 427,240 to 427,596
_2264
B158DRAFT_2265: B158DRAFT_2265 - tyrosine recombinase XerD, at 427,701 to 428,588
_2265
Position (kb) 427
428 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 427.736 kb on + strand at 427.744 kb on - strand at 427.744 kb on - strand at 427.744 kb on - strand at 427.754 kb on - strand at 427.759 kb on - strand at 427.759 kb on - strand at 427.989 kb on - strand, within B158DRAFT_2265 at 428.053 kb on - strand, within B158DRAFT_2265 at 428.082 kb on + strand, within B158DRAFT_2265 at 428.138 kb on - strand, within B158DRAFT_2265 at 428.187 kb on + strand, within B158DRAFT_2265 at 428.187 kb on + strand, within B158DRAFT_2265 at 428.210 kb on + strand, within B158DRAFT_2265 at 428.218 kb on - strand, within B158DRAFT_2265 at 428.218 kb on - strand, within B158DRAFT_2265 at 428.232 kb on + strand, within B158DRAFT_2265 at 428.239 kb on - strand, within B158DRAFT_2265 at 428.262 kb on + strand, within B158DRAFT_2265 at 428.263 kb on - strand, within B158DRAFT_2265 at 428.265 kb on - strand, within B158DRAFT_2265 at 428.275 kb on - strand, within B158DRAFT_2265 at 428.277 kb on - strand, within B158DRAFT_2265 at 428.282 kb on - strand, within B158DRAFT_2265 at 428.289 kb on + strand, within B158DRAFT_2265 at 428.329 kb on + strand, within B158DRAFT_2265 at 428.352 kb on + strand, within B158DRAFT_2265 at 428.365 kb on - strand, within B158DRAFT_2265 at 428.418 kb on + strand, within B158DRAFT_2265 at 428.426 kb on - strand, within B158DRAFT_2265 at 428.453 kb on + strand, within B158DRAFT_2265 at 428.453 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.490 kb on - strand, within B158DRAFT_2265 at 428.522 kb on + strand at 428.522 kb on + strand at 428.522 kb on + strand at 428.522 kb on + strand at 428.522 kb on + strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.556 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 20C remove 427,736 + -0.7 427,744 - -1.2 427,744 - -1.4 427,744 - -0.8 427,754 - -0.3 427,759 - -1.1 427,759 - -1.5 427,989 - B158DRAFT_2265 0.32 -1.1 428,053 - B158DRAFT_2265 0.40 -0.8 428,082 + B158DRAFT_2265 0.43 -0.6 428,138 - B158DRAFT_2265 0.49 -1.2 428,187 + B158DRAFT_2265 0.55 -4.1 428,187 + B158DRAFT_2265 0.55 -0.5 428,210 + B158DRAFT_2265 0.57 -1.5 428,218 - B158DRAFT_2265 0.58 -1.9 428,218 - B158DRAFT_2265 0.58 -1.2 428,232 + B158DRAFT_2265 0.60 -0.9 428,239 - B158DRAFT_2265 0.61 -1.1 428,262 + B158DRAFT_2265 0.63 -2.1 428,263 - B158DRAFT_2265 0.63 -1.6 428,265 - B158DRAFT_2265 0.64 +2.3 428,275 - B158DRAFT_2265 0.65 -0.2 428,277 - B158DRAFT_2265 0.65 -0.9 428,282 - B158DRAFT_2265 0.65 -1.2 428,289 + B158DRAFT_2265 0.66 -2.7 428,329 + B158DRAFT_2265 0.71 -1.2 428,352 + B158DRAFT_2265 0.73 -0.7 428,365 - B158DRAFT_2265 0.75 -0.6 428,418 + B158DRAFT_2265 0.81 -0.7 428,426 - B158DRAFT_2265 0.82 -1.4 428,453 + B158DRAFT_2265 0.85 -0.7 428,453 + B158DRAFT_2265 0.85 -0.9 428,471 + B158DRAFT_2265 0.87 -1.2 428,471 + B158DRAFT_2265 0.87 -1.5 428,471 + B158DRAFT_2265 0.87 -1.3 428,471 + B158DRAFT_2265 0.87 -1.1 428,471 + B158DRAFT_2265 0.87 -0.7 428,479 - B158DRAFT_2265 0.88 -1.2 428,479 - B158DRAFT_2265 0.88 -1.0 428,479 - B158DRAFT_2265 0.88 -0.9 428,479 - B158DRAFT_2265 0.88 -1.8 428,479 - B158DRAFT_2265 0.88 -1.1 428,490 - B158DRAFT_2265 0.89 -1.2 428,522 + -0.5 428,522 + -0.8 428,522 + -0.8 428,522 + -2.1 428,522 + -1.4 428,530 - -1.6 428,530 - -1.0 428,530 - -0.2 428,530 - -1.2 428,530 - -1.8 428,530 - -1.0 428,530 - -0.5 428,556 + -1.4
Or see this region's nucleotide sequence