Experiment: m.b. 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0084 and B158DRAFT_0085 are separated by 230 nucleotides B158DRAFT_0085 and B158DRAFT_0086 are separated by 7 nucleotides B158DRAFT_0086 and B158DRAFT_0087 overlap by 1 nucleotides B158DRAFT_0087 and B158DRAFT_0088 are separated by 2 nucleotides
B158DRAFT_0084: B158DRAFT_0084 - penicillin-binding protein 2, at 78,519 to 80,447
_0084
B158DRAFT_0085: B158DRAFT_0085 - rRNA large subunit m3Psi methyltransferase RlmH, at 80,678 to 81,148
_0085
B158DRAFT_0086: B158DRAFT_0086 - iojap-like ribosome-associated protein, at 81,156 to 81,509
_0086
B158DRAFT_0087: B158DRAFT_0087 - nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), at 81,509 to 82,183
_0087
B158DRAFT_0088: B158DRAFT_0088 - DNA polymerase III, delta subunit (EC 2.7.7.7), at 82,186 to 83,265
_0088
Position (kb)
81
82 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 80.526 kb on + strand at 80.555 kb on - strand at 80.555 kb on - strand at 80.555 kb on - strand at 80.555 kb on - strand at 80.573 kb on + strand at 80.579 kb on + strand at 80.581 kb on - strand at 80.581 kb on - strand at 80.637 kb on - strand at 80.789 kb on + strand, within B158DRAFT_0085 at 80.854 kb on + strand, within B158DRAFT_0085 at 80.862 kb on - strand, within B158DRAFT_0085 at 80.960 kb on - strand, within B158DRAFT_0085 at 80.981 kb on - strand, within B158DRAFT_0085 at 81.033 kb on - strand, within B158DRAFT_0085 at 81.036 kb on + strand, within B158DRAFT_0085 at 81.097 kb on + strand, within B158DRAFT_0085 at 81.097 kb on + strand, within B158DRAFT_0085 at 81.105 kb on - strand at 81.105 kb on - strand at 81.105 kb on - strand at 81.110 kb on - strand at 81.154 kb on + strand at 81.162 kb on + strand at 81.256 kb on + strand, within B158DRAFT_0086 at 81.259 kb on - strand, within B158DRAFT_0086 at 81.298 kb on + strand, within B158DRAFT_0086 at 81.307 kb on - strand, within B158DRAFT_0086 at 81.322 kb on + strand, within B158DRAFT_0086 at 81.347 kb on - strand, within B158DRAFT_0086 at 81.347 kb on - strand, within B158DRAFT_0086 at 81.369 kb on - strand, within B158DRAFT_0086 at 81.417 kb on + strand, within B158DRAFT_0086 at 81.529 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.230 kb on - strand at 82.240 kb on - strand at 82.240 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 20C remove 80,526 + -1.3 80,555 - -0.1 80,555 - +0.0 80,555 - -0.9 80,555 - -0.2 80,573 + -2.1 80,579 + -3.1 80,581 - +0.0 80,581 - -0.4 80,637 - -0.2 80,789 + B158DRAFT_0085 0.24 -1.1 80,854 + B158DRAFT_0085 0.37 -1.1 80,862 - B158DRAFT_0085 0.39 -0.1 80,960 - B158DRAFT_0085 0.60 -0.2 80,981 - B158DRAFT_0085 0.64 -0.1 81,033 - B158DRAFT_0085 0.75 -0.4 81,036 + B158DRAFT_0085 0.76 -1.6 81,097 + B158DRAFT_0085 0.89 -1.7 81,097 + B158DRAFT_0085 0.89 -1.4 81,105 - -0.5 81,105 - -0.7 81,105 - -0.7 81,110 - -0.5 81,154 + -0.2 81,162 + -1.4 81,256 + B158DRAFT_0086 0.28 -0.1 81,259 - B158DRAFT_0086 0.29 +0.1 81,298 + B158DRAFT_0086 0.40 -0.8 81,307 - B158DRAFT_0086 0.43 -0.0 81,322 + B158DRAFT_0086 0.47 -1.0 81,347 - B158DRAFT_0086 0.54 -0.6 81,347 - B158DRAFT_0086 0.54 -0.7 81,369 - B158DRAFT_0086 0.60 -0.3 81,417 + B158DRAFT_0086 0.74 -1.5 81,529 - +0.0 82,230 - +0.2 82,230 - -0.5 82,230 - +0.4 82,230 - -0.1 82,230 - +0.0 82,230 - -0.5 82,230 - -0.7 82,230 - +0.7 82,230 - -0.5 82,240 - -0.5 82,240 - +0.0
Or see this region's nucleotide sequence