Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_921 and PfGW456L13_922 overlap by 4 nucleotides PfGW456L13_922 and PfGW456L13_923 are separated by 33 nucleotides PfGW456L13_923 and PfGW456L13_924 are separated by 193 nucleotides
PfGW456L13_921 - Alkanesulfonates transport system permease protein, at 1,032,269 to 1,033,051
_921
PfGW456L13_922 - Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB, at 1,033,048 to 1,033,854
_922
PfGW456L13_923 - Organosulfonate utilization protein SsuF, at 1,033,888 to 1,034,103
_923
PfGW456L13_924 - Transcriptional regulator, TetR family, at 1,034,297 to 1,034,929
_924
Position (kb)
1033
1034
1035 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1032.947 kb on + strand, within PfGW456L13_921 at 1033.022 kb on + strand at 1033.022 kb on + strand at 1033.209 kb on + strand, within PfGW456L13_922 at 1033.209 kb on + strand, within PfGW456L13_922 at 1033.209 kb on + strand, within PfGW456L13_922 at 1033.210 kb on - strand, within PfGW456L13_922 at 1033.830 kb on + strand at 1033.852 kb on + strand at 1033.893 kb on + strand at 1033.893 kb on + strand at 1033.893 kb on + strand at 1033.894 kb on - strand at 1033.894 kb on - strand at 1033.894 kb on - strand at 1034.101 kb on + strand at 1034.101 kb on + strand at 1034.101 kb on + strand at 1034.101 kb on + strand at 1034.102 kb on - strand at 1034.102 kb on - strand at 1034.102 kb on - strand at 1034.102 kb on - strand at 1034.115 kb on - strand at 1034.218 kb on + strand at 1034.218 kb on + strand at 1034.218 kb on + strand at 1034.218 kb on + strand at 1034.218 kb on + strand at 1034.218 kb on + strand at 1034.219 kb on - strand at 1034.219 kb on - strand at 1034.298 kb on + strand at 1034.299 kb on - strand at 1034.299 kb on - strand at 1034.319 kb on + strand at 1034.319 kb on + strand at 1034.319 kb on + strand at 1034.319 kb on + strand at 1034.319 kb on + strand at 1034.320 kb on - strand at 1034.320 kb on - strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.331 kb on + strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.332 kb on - strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.343 kb on + strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.344 kb on - strand at 1034.418 kb on + strand, within PfGW456L13_924 at 1034.418 kb on + strand, within PfGW456L13_924 at 1034.418 kb on + strand, within PfGW456L13_924 at 1034.418 kb on + strand, within PfGW456L13_924 at 1034.418 kb on + strand, within PfGW456L13_924 at 1034.418 kb on + strand, within PfGW456L13_924 at 1034.418 kb on + strand, within PfGW456L13_924 at 1034.419 kb on - strand, within PfGW456L13_924 at 1034.419 kb on - strand, within PfGW456L13_924 at 1034.419 kb on - strand, within PfGW456L13_924 at 1034.419 kb on - strand, within PfGW456L13_924 at 1034.419 kb on - strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.613 kb on + strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.614 kb on - strand, within PfGW456L13_924 at 1034.769 kb on + strand, within PfGW456L13_924 at 1034.769 kb on + strand, within PfGW456L13_924 at 1034.812 kb on - strand, within PfGW456L13_924 at 1034.812 kb on - strand, within PfGW456L13_924 at 1034.959 kb on + strand at 1034.959 kb on + strand at 1034.959 kb on + strand at 1034.959 kb on + strand at 1034.959 kb on + strand at 1034.959 kb on + strand at 1034.959 kb on + strand at 1034.959 kb on + strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.960 kb on - strand at 1034.983 kb on + strand at 1035.048 kb on + strand at 1035.048 kb on + strand at 1035.049 kb on - strand at 1035.049 kb on - strand at 1035.049 kb on - strand at 1035.057 kb on + strand at 1035.058 kb on - strand at 1035.058 kb on - strand at 1035.058 kb on - strand at 1035.058 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,032,947 + PfGW456L13_921 0.87 -0.1 1,033,022 + -0.4 1,033,022 + +0.7 1,033,209 + PfGW456L13_922 0.20 +1.0 1,033,209 + PfGW456L13_922 0.20 -0.4 1,033,209 + PfGW456L13_922 0.20 +0.1 1,033,210 - PfGW456L13_922 0.20 -0.6 1,033,830 + -0.6 1,033,852 + -0.0 1,033,893 + -0.2 1,033,893 + -0.0 1,033,893 + -0.4 1,033,894 - -0.5 1,033,894 - +0.4 1,033,894 - +0.4 1,034,101 + +0.8 1,034,101 + -0.2 1,034,101 + +0.5 1,034,101 + +0.3 1,034,102 - -0.7 1,034,102 - -0.7 1,034,102 - +1.4 1,034,102 - -1.2 1,034,115 - +0.5 1,034,218 + -1.4 1,034,218 + +0.7 1,034,218 + +0.8 1,034,218 + +0.1 1,034,218 + -1.8 1,034,218 + +0.9 1,034,219 - -0.2 1,034,219 - -0.3 1,034,298 + +0.6 1,034,299 - -3.0 1,034,299 - +0.6 1,034,319 + -0.5 1,034,319 + -0.1 1,034,319 + -0.1 1,034,319 + +0.5 1,034,319 + +0.1 1,034,320 - +1.3 1,034,320 - +0.8 1,034,331 + -1.1 1,034,331 + -0.1 1,034,331 + +0.2 1,034,331 + -1.2 1,034,331 + -0.0 1,034,331 + -0.2 1,034,331 + +0.5 1,034,331 + +0.4 1,034,331 + +0.2 1,034,331 + +0.4 1,034,331 + -2.7 1,034,331 + +0.7 1,034,331 + +0.8 1,034,332 - +0.7 1,034,332 - -0.4 1,034,332 - -0.3 1,034,332 - +0.5 1,034,332 - -0.8 1,034,332 - -0.6 1,034,332 - +0.2 1,034,332 - -0.5 1,034,332 - +0.2 1,034,332 - -2.5 1,034,343 + -0.1 1,034,343 + +0.2 1,034,343 + -0.0 1,034,343 + -0.6 1,034,343 + +0.7 1,034,343 + +1.1 1,034,343 + -1.4 1,034,343 + +0.4 1,034,343 + -0.5 1,034,343 + +0.2 1,034,343 + +0.3 1,034,343 + -0.3 1,034,344 - -0.9 1,034,344 - -0.2 1,034,344 - -0.8 1,034,344 - +0.3 1,034,344 - -1.4 1,034,344 - +0.4 1,034,344 - -0.8 1,034,344 - +0.7 1,034,344 - -1.0 1,034,344 - +1.4 1,034,344 - +0.4 1,034,344 - -0.2 1,034,344 - +0.4 1,034,344 - -0.5 1,034,344 - +0.1 1,034,344 - -0.7 1,034,344 - +0.0 1,034,344 - +0.5 1,034,344 - +0.2 1,034,344 - +0.2 1,034,344 - -1.0 1,034,418 + PfGW456L13_924 0.19 -0.3 1,034,418 + PfGW456L13_924 0.19 +0.2 1,034,418 + PfGW456L13_924 0.19 -0.5 1,034,418 + PfGW456L13_924 0.19 +1.0 1,034,418 + PfGW456L13_924 0.19 +0.2 1,034,418 + PfGW456L13_924 0.19 +0.6 1,034,418 + PfGW456L13_924 0.19 +0.7 1,034,419 - PfGW456L13_924 0.19 +0.8 1,034,419 - PfGW456L13_924 0.19 +0.4 1,034,419 - PfGW456L13_924 0.19 -0.9 1,034,419 - PfGW456L13_924 0.19 -1.8 1,034,419 - PfGW456L13_924 0.19 -0.8 1,034,613 + PfGW456L13_924 0.50 -0.2 1,034,613 + PfGW456L13_924 0.50 +0.4 1,034,613 + PfGW456L13_924 0.50 +0.8 1,034,613 + PfGW456L13_924 0.50 -0.0 1,034,613 + PfGW456L13_924 0.50 -2.6 1,034,613 + PfGW456L13_924 0.50 -1.3 1,034,613 + PfGW456L13_924 0.50 +0.2 1,034,613 + PfGW456L13_924 0.50 +0.1 1,034,613 + PfGW456L13_924 0.50 -0.3 1,034,613 + PfGW456L13_924 0.50 +1.1 1,034,613 + PfGW456L13_924 0.50 -0.0 1,034,613 + PfGW456L13_924 0.50 +0.4 1,034,613 + PfGW456L13_924 0.50 -0.8 1,034,613 + PfGW456L13_924 0.50 +0.9 1,034,613 + PfGW456L13_924 0.50 -0.1 1,034,613 + PfGW456L13_924 0.50 +0.4 1,034,613 + PfGW456L13_924 0.50 +0.1 1,034,613 + PfGW456L13_924 0.50 +0.4 1,034,613 + PfGW456L13_924 0.50 +0.7 1,034,613 + PfGW456L13_924 0.50 -0.4 1,034,614 - PfGW456L13_924 0.50 -1.4 1,034,614 - PfGW456L13_924 0.50 -0.6 1,034,614 - PfGW456L13_924 0.50 +0.0 1,034,614 - PfGW456L13_924 0.50 -0.6 1,034,614 - PfGW456L13_924 0.50 -1.2 1,034,614 - PfGW456L13_924 0.50 -0.1 1,034,614 - PfGW456L13_924 0.50 -0.3 1,034,614 - PfGW456L13_924 0.50 -0.6 1,034,614 - PfGW456L13_924 0.50 +0.3 1,034,614 - PfGW456L13_924 0.50 +0.1 1,034,614 - PfGW456L13_924 0.50 +0.4 1,034,614 - PfGW456L13_924 0.50 -1.5 1,034,614 - PfGW456L13_924 0.50 +0.0 1,034,614 - PfGW456L13_924 0.50 -0.7 1,034,614 - PfGW456L13_924 0.50 -0.9 1,034,614 - PfGW456L13_924 0.50 -0.2 1,034,614 - PfGW456L13_924 0.50 -1.2 1,034,769 + PfGW456L13_924 0.75 +0.7 1,034,769 + PfGW456L13_924 0.75 +1.1 1,034,812 - PfGW456L13_924 0.81 -0.4 1,034,812 - PfGW456L13_924 0.81 +0.5 1,034,959 + -0.1 1,034,959 + +0.5 1,034,959 + +0.6 1,034,959 + -0.3 1,034,959 + +0.7 1,034,959 + +0.3 1,034,959 + -0.2 1,034,959 + +0.5 1,034,960 - -0.2 1,034,960 - -1.2 1,034,960 - -0.6 1,034,960 - +0.7 1,034,960 - -0.1 1,034,960 - +2.4 1,034,960 - -0.9 1,034,960 - +0.6 1,034,960 - -0.9 1,034,960 - +0.7 1,034,960 - -0.7 1,034,983 + -0.0 1,035,048 + -0.3 1,035,048 + +0.2 1,035,049 - -0.1 1,035,049 - -0.2 1,035,049 - +1.5 1,035,057 + -1.5 1,035,058 - -1.5 1,035,058 - -0.3 1,035,058 - +0.9 1,035,058 - -0.9
Or see this region's nucleotide sequence