Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3960

Experiment: L-Glutamine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N)
4,443,559	+		PfGW456L13_3959	0.73	-0.4
4,443,559	+		PfGW456L13_3959	0.73	+1.5
4,443,559	+		PfGW456L13_3959	0.73	-0.3
4,443,559	+		PfGW456L13_3959	0.73	+0.4
4,443,559	+		PfGW456L13_3959	0.73	+0.5
4,443,559	+		PfGW456L13_3959	0.73	+0.2
4,443,559	+		PfGW456L13_3959	0.73	+0.5
4,443,559	+		PfGW456L13_3959	0.73	-0.5
4,443,560	-		PfGW456L13_3959	0.73	-1.7
4,443,560	-		PfGW456L13_3959	0.73	+1.0
4,443,560	-		PfGW456L13_3959	0.73	-1.9
4,443,560	-		PfGW456L13_3959	0.73	-0.8
4,443,560	-		PfGW456L13_3959	0.73	-0.4
4,443,560	-		PfGW456L13_3959	0.73	+0.5
4,443,560	-		PfGW456L13_3959	0.73	-1.4
4,443,560	-		PfGW456L13_3959	0.73	+0.3
4,443,640	+		PfGW456L13_3959	0.77	-0.3
4,443,641	-		PfGW456L13_3959	0.77	+1.0
4,443,641	-		PfGW456L13_3959	0.77	-0.4
4,443,664	+		PfGW456L13_3959	0.78	-0.5
4,443,664	+		PfGW456L13_3959	0.78	-0.4
4,443,665	-		PfGW456L13_3959	0.79	+0.5
4,443,665	-		PfGW456L13_3959	0.79	+0.4
4,443,800	-		PfGW456L13_3959	0.85	+1.1
4,443,800	-		PfGW456L13_3959	0.85	+0.8
4,443,800	-		PfGW456L13_3959	0.85	+0.2
4,443,800	-		PfGW456L13_3959	0.85	-0.7
4,443,800	-		PfGW456L13_3959	0.85	-1.1
4,443,814	+		PfGW456L13_3959	0.86	+0.0
4,443,814	+		PfGW456L13_3959	0.86	-0.1
4,443,814	+		PfGW456L13_3959	0.86	-0.1
4,443,814	+		PfGW456L13_3959	0.86	-0.3
4,443,815	-		PfGW456L13_3959	0.86	+0.2
4,443,817	+		PfGW456L13_3959	0.86	-3.3
4,443,817	+		PfGW456L13_3959	0.86	+0.0
4,443,817	+		PfGW456L13_3959	0.86	+1.2
4,443,817	+		PfGW456L13_3959	0.86	+0.5
4,443,817	+		PfGW456L13_3959	0.86	+0.2
4,443,817	+		PfGW456L13_3959	0.86	-0.8
4,443,817	+		PfGW456L13_3959	0.86	-1.2
4,443,818	-		PfGW456L13_3959	0.86	-1.5
4,443,818	-		PfGW456L13_3959	0.86	+0.8
4,443,818	-		PfGW456L13_3959	0.86	+0.7
4,443,823	+		PfGW456L13_3959	0.86	+0.5
4,443,824	-		PfGW456L13_3959	0.86	+0.7
4,443,824	-		PfGW456L13_3959	0.86	+1.8
4,443,824	-		PfGW456L13_3959	0.86	-1.3
4,443,824	-		PfGW456L13_3959	0.86	+0.3
4,443,827	-		PfGW456L13_3959	0.87	+0.2
4,443,838	+		PfGW456L13_3959	0.87	-1.8
4,443,839	-		PfGW456L13_3959	0.87	-0.2
4,443,880	+		PfGW456L13_3959	0.89	-1.5
4,443,880	+				-1.1
4,444,080	+				-0.1
4,444,080	+				-1.6
4,444,081	-				-0.4
4,444,081	-				+0.5
4,444,081	-				+0.1
4,444,081	-				+0.5
4,444,102	+				-0.3
4,444,103	-				-0.2
4,444,103	-				-0.1
4,444,103	-				-0.1
4,444,235	-				-0.1
4,444,302	+				-0.1
4,444,302	+				-2.1
4,444,302	+				-0.1
4,444,302	+				+0.6
4,444,303	-				-0.4
4,444,303	-				-0.2
4,444,303	-				-0.3
4,444,303	-				-2.5
4,444,303	-				-0.2
4,444,344	+				+0.2
4,444,344	+				-1.3
4,444,344	+				-1.8
4,444,344	+				-0.6
4,444,344	+				-0.5
4,444,344	+				+0.5
4,444,345	-				-1.3
4,444,345	-				-0.3
4,444,345	-				-1.8
4,444,345	-				-1.3
4,444,345	-				-2.4
4,444,346	+				-2.7
4,444,346	+				-3.3
4,444,346	+				-2.8
4,444,347	-				-3.1
4,444,347	-				-2.4
4,444,347	-				-3.6
4,444,347	-				-2.4
4,444,349	+				-3.2
4,444,349	+				-0.2
4,444,349	+				-0.4
4,444,349	+				-0.8
4,444,349	+				-1.2
4,444,349	+				-1.2
4,444,349	+				-0.5
4,444,349	+				+0.0
4,444,349	+				-2.6
4,444,349	+				-0.6
4,444,349	+				-2.6
4,444,349	+				-0.5
4,444,349	+				-0.8
4,444,350	-				-1.8
4,444,350	-				-2.7
4,444,350	-				-2.6
4,444,350	-				-3.1
4,444,350	-				-3.6
4,444,350	-				-3.1
4,444,350	-				-3.2
4,444,350	-				-2.8
4,444,350	-				-1.8
4,444,350	-				-1.1
4,444,350	-				-2.9
4,444,350	-				-1.8
4,444,350	-				+0.2
4,444,374	-				-2.1
4,444,432	-				-1.3
4,444,432	-				-0.5
4,444,544	+				-1.8
4,444,659	-		PfGW456L13_3960	0.19	-2.1
4,444,722	+		PfGW456L13_3960	0.24	-2.4
4,444,722	+		PfGW456L13_3960	0.24	-1.8
4,444,877	+		PfGW456L13_3960	0.37	-2.6
4,444,878	-		PfGW456L13_3960	0.37	-2.7
4,444,878	-		PfGW456L13_3960	0.37	-0.6
4,444,883	+		PfGW456L13_3960	0.38	-3.2
4,444,884	-		PfGW456L13_3960	0.38	-4.4
4,444,886	+		PfGW456L13_3960	0.38	-4.0
4,444,886	+		PfGW456L13_3960	0.38	-3.5
4,444,887	-		PfGW456L13_3960	0.38	-0.5
4,445,079	-		PfGW456L13_3960	0.54	-2.9
4,445,079	-		PfGW456L13_3960	0.54	-2.5
4,445,121	+		PfGW456L13_3960	0.57	-3.2
4,445,285	+		PfGW456L13_3960	0.71	-3.0
4,445,285	+		PfGW456L13_3960	0.71	-3.1
4,445,285	+		PfGW456L13_3960	0.71	-3.1
4,445,285	+		PfGW456L13_3960	0.71	-3.8
4,445,285	+		PfGW456L13_3960	0.71	-4.2
4,445,286	-		PfGW456L13_3960	0.71	-1.4
4,445,286	-		PfGW456L13_3960	0.71	-2.1
4,445,286	-		PfGW456L13_3960	0.71	-4.9
4,445,286	-		PfGW456L13_3960	0.71	+0.5
4,445,486	+		PfGW456L13_3960	0.88	-3.6
4,445,486	+		PfGW456L13_3960	0.88	-3.9
4,445,486	+		PfGW456L13_3960	0.88	-2.4
4,445,540	+				-3.7
4,445,540	+				-3.0
4,445,540	+				-3.1
4,445,541	-				-2.1
4,445,541	-				-1.7
4,445,677	+				-0.3
4,445,678	-				-0.1
4,445,678	-				-1.4
4,445,678	-				-0.1
4,445,690	+				-0.6
4,445,691	-				+0.7
4,445,704	+				-0.1
4,445,704	+				-0.2
4,445,704	+				-0.1
4,445,704	+				-0.2
4,445,704	+				+0.3
4,445,705	-				+0.5
4,445,705	-				+1.3
4,445,705	-				+0.7
4,445,718	+				+1.1
4,445,733	+				+2.9
4,445,733	+				-0.5
4,445,733	+				+0.1
4,445,733	+				-0.6
4,445,734	-				+1.5
4,445,734	-				-0.5
4,445,838	+				-0.3
4,445,838	+				-0.8
4,445,838	+				-0.2
4,445,838	+				-0.3
4,445,838	+				+0.1
4,445,838	+				-0.2
4,445,838	+				-0.1
4,445,839	-				+0.9
4,445,839	-				-0.5
4,445,839	-				+0.1
4,445,839	-				-0.6
4,445,839	-				-0.7
4,446,035	+		PfGW456L13_3961	0.80	+0.2
4,446,036	-		PfGW456L13_3961	0.80	+0.9
4,446,061	+				+0.4
4,446,062	-				-0.4
4,446,074	+				-0.2
4,446,122	+		PfGW456L13_3962	0.21	-0.3
4,446,122	+		PfGW456L13_3962	0.21	-0.1
4,446,122	+		PfGW456L13_3962	0.21	+0.6
4,446,122	+		PfGW456L13_3962	0.21	+0.6
4,446,123	-		PfGW456L13_3962	0.22	-0.3
4,446,123	-		PfGW456L13_3962	0.22	+0.2
4,446,123	-		PfGW456L13_3962	0.22	+0.3
4,446,123	-		PfGW456L13_3962	0.22	-0.1
4,446,123	-		PfGW456L13_3962	0.22	+1.2
4,446,123	-		PfGW456L13_3962	0.22	+1.0
4,446,123	-		PfGW456L13_3962	0.22	-0.1
4,446,157	-		PfGW456L13_3962	0.36	+0.2
4,446,408	+				+0.1
4,446,409	-				-0.2
4,446,409	-				-0.3
4,446,409	-				-0.1
4,446,409	-				-0.5
4,446,409	-				+0.2