Experiment: LB_plus_SM_buffer with 6C2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF770 and GFF771 are separated by 6 nucleotides GFF771 and GFF772 are separated by 17 nucleotides GFF772 and GFF773 are separated by 229 nucleotides GFF773 and GFF774 are separated by 95 nucleotides
GFF770 - Arginine ABC transporter, permease protein ArtQ, at 126,635 to 127,351
GFF770
GFF771 - Arginine ABC transporter, periplasmic arginine-binding protein ArtI, at 127,358 to 128,089
GFF771
GFF772 - Arginine ABC transporter, ATP-binding protein ArtP, at 128,107 to 128,835
GFF772
GFF773 - probable lipoprotein, at 129,065 to 129,580
GFF773
GFF774 - putative integrase, at 129,676 to 130,974
GFF774
Position (kb)
128
129 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 127.215 kb on - strand, within GFF770 at 127.269 kb on - strand, within GFF770 at 127.360 kb on - strand at 127.379 kb on - strand at 127.464 kb on - strand, within GFF771 at 127.511 kb on - strand, within GFF771 at 127.511 kb on - strand, within GFF771 at 127.531 kb on + strand, within GFF771 at 127.698 kb on - strand, within GFF771 at 127.737 kb on + strand, within GFF771 at 127.925 kb on - strand, within GFF771 at 127.972 kb on + strand, within GFF771 at 127.973 kb on - strand, within GFF771 at 127.973 kb on - strand, within GFF771 at 128.562 kb on + strand, within GFF772 at 128.565 kb on - strand, within GFF772 at 128.565 kb on - strand, within GFF772 at 128.596 kb on + strand, within GFF772 at 128.597 kb on - strand, within GFF772 at 128.845 kb on + strand at 128.846 kb on - strand at 128.865 kb on + strand at 128.865 kb on + strand at 128.866 kb on - strand at 128.866 kb on - strand at 128.880 kb on + strand at 128.955 kb on + strand at 128.981 kb on - strand at 129.169 kb on + strand, within GFF773 at 129.569 kb on - strand at 129.569 kb on - strand at 129.593 kb on - strand at 129.594 kb on + strand at 129.597 kb on - strand at 129.619 kb on - strand at 129.724 kb on - strand at 129.746 kb on - strand at 129.751 kb on + strand at 129.752 kb on - strand at 129.752 kb on - strand at 129.752 kb on - strand at 129.790 kb on + strand at 129.795 kb on + strand at 129.796 kb on - strand at 129.796 kb on - strand at 129.796 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 6C2_phage 15 MOI remove 127,215 - GFF770 0.81 +0.1 127,269 - GFF770 0.88 -0.1 127,360 - -0.5 127,379 - +3.2 127,464 - GFF771 0.14 +0.5 127,511 - GFF771 0.21 -0.7 127,511 - GFF771 0.21 -0.2 127,531 + GFF771 0.24 -0.2 127,698 - GFF771 0.46 +0.1 127,737 + GFF771 0.52 -0.5 127,925 - GFF771 0.77 -0.8 127,972 + GFF771 0.84 -0.8 127,973 - GFF771 0.84 +0.0 127,973 - GFF771 0.84 +0.5 128,562 + GFF772 0.62 -0.7 128,565 - GFF772 0.63 -0.4 128,565 - GFF772 0.63 -1.2 128,596 + GFF772 0.67 -0.1 128,597 - GFF772 0.67 -0.9 128,845 + -0.0 128,846 - +0.3 128,865 + -0.6 128,865 + -0.3 128,866 - -0.9 128,866 - +0.2 128,880 + -0.7 128,955 + -0.0 128,981 - -0.2 129,169 + GFF773 0.20 -0.5 129,569 - +0.2 129,569 - +0.1 129,593 - -0.6 129,594 + -1.0 129,597 - -0.7 129,619 - +0.3 129,724 - -0.0 129,746 - +0.4 129,751 + +0.5 129,752 - -1.8 129,752 - +0.1 129,752 - +0.6 129,790 + -0.4 129,795 + -0.5 129,796 - -0.1 129,796 - +0.5 129,796 - +0.2
Or see this region's nucleotide sequence