Experiment: LB_plus_SM_buffer with 6C2_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2599 and GFF2600 are separated by 106 nucleotides GFF2600 and GFF2601 overlap by 4 nucleotides GFF2601 and GFF2602 are separated by 216 nucleotides
GFF2599 - Tellurite resistance protein TehA, at 124,563 to 125,576
GFF2599
GFF2600 - FIG005189: putative transferase clustered with tellurite resistance proteins TehA/TehB, at 125,683 to 126,663
GFF2600
GFF2601 - Ribosomal-protein-L7p-serine acetyltransferase, at 126,660 to 127,199
GFF2601
GFF2602 - Putative sgc region protein sgcX, at 127,416 to 128,534
GFF2602
Position (kb) 125
126
127 Strain fitness (log2 ratio) -1
0
1 at 124.818 kb on + strand, within GFF2599 at 124.857 kb on + strand, within GFF2599 at 124.970 kb on + strand, within GFF2599 at 125.141 kb on - strand, within GFF2599 at 125.221 kb on - strand, within GFF2599 at 125.415 kb on - strand, within GFF2599 at 125.458 kb on - strand, within GFF2599 at 125.655 kb on - strand at 125.722 kb on - strand at 125.722 kb on - strand at 125.757 kb on - strand at 125.946 kb on + strand, within GFF2600 at 126.188 kb on + strand, within GFF2600 at 126.371 kb on - strand, within GFF2600 at 126.512 kb on + strand, within GFF2600 at 126.513 kb on - strand, within GFF2600 at 126.570 kb on - strand at 126.586 kb on - strand at 126.588 kb on + strand at 126.690 kb on - strand at 126.690 kb on - strand at 126.734 kb on + strand, within GFF2601 at 126.735 kb on - strand, within GFF2601 at 126.749 kb on + strand, within GFF2601 at 126.803 kb on + strand, within GFF2601 at 126.838 kb on + strand, within GFF2601 at 126.838 kb on + strand, within GFF2601 at 126.917 kb on - strand, within GFF2601 at 126.958 kb on - strand, within GFF2601 at 127.024 kb on - strand, within GFF2601 at 127.024 kb on - strand, within GFF2601 at 127.025 kb on + strand, within GFF2601 at 127.025 kb on + strand, within GFF2601 at 127.025 kb on + strand, within GFF2601 at 127.026 kb on - strand, within GFF2601 at 127.026 kb on - strand, within GFF2601 at 127.236 kb on - strand at 127.240 kb on - strand at 127.270 kb on - strand at 127.352 kb on - strand at 127.549 kb on + strand, within GFF2602 at 127.634 kb on + strand, within GFF2602 at 127.635 kb on - strand, within GFF2602
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 6C2_phage 15 MOI remove 124,818 + GFF2599 0.25 -0.3 124,857 + GFF2599 0.29 -0.9 124,970 + GFF2599 0.40 +0.9 125,141 - GFF2599 0.57 +0.6 125,221 - GFF2599 0.65 -0.3 125,415 - GFF2599 0.84 +1.0 125,458 - GFF2599 0.88 +0.9 125,655 - -0.5 125,722 - -0.6 125,722 - -0.3 125,757 - -0.2 125,946 + GFF2600 0.27 +0.4 126,188 + GFF2600 0.51 -0.1 126,371 - GFF2600 0.70 +0.2 126,512 + GFF2600 0.85 +0.4 126,513 - GFF2600 0.85 +0.1 126,570 - +0.3 126,586 - +0.1 126,588 + -0.1 126,690 - -0.9 126,690 - +0.1 126,734 + GFF2601 0.14 -0.6 126,735 - GFF2601 0.14 -0.1 126,749 + GFF2601 0.16 -0.2 126,803 + GFF2601 0.26 +0.5 126,838 + GFF2601 0.33 -0.6 126,838 + GFF2601 0.33 +0.5 126,917 - GFF2601 0.48 +0.2 126,958 - GFF2601 0.55 -0.9 127,024 - GFF2601 0.67 -0.9 127,024 - GFF2601 0.67 +0.3 127,025 + GFF2601 0.68 -0.3 127,025 + GFF2601 0.68 -1.0 127,025 + GFF2601 0.68 -0.4 127,026 - GFF2601 0.68 -0.0 127,026 - GFF2601 0.68 -0.6 127,236 - +0.4 127,240 - -0.4 127,270 - -0.1 127,352 - -0.1 127,549 + GFF2602 0.12 +0.4 127,634 + GFF2602 0.19 -0.6 127,635 - GFF2602 0.20 -0.5
Or see this region's nucleotide sequence