Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0958 and B158DRAFT_0959 are separated by 575 nucleotides B158DRAFT_0959 and B158DRAFT_0960 are separated by 279 nucleotides
B158DRAFT_0958: B158DRAFT_0958 - Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems, at 988,985 to 989,557
_0958
B158DRAFT_0959: B158DRAFT_0959 - hypothetical protein, at 990,133 to 990,801
_0959
B158DRAFT_0960: B158DRAFT_0960 - Site-specific recombinases, DNA invertase Pin homologs, at 991,081 to 991,635
_0960
Position (kb) 990
991 Strain fitness (log2 ratio) -2
-1
0
1 at 989.142 kb on - strand, within B158DRAFT_0958 at 989.156 kb on + strand, within B158DRAFT_0958 at 989.252 kb on + strand, within B158DRAFT_0958 at 989.260 kb on - strand, within B158DRAFT_0958 at 989.265 kb on - strand, within B158DRAFT_0958 at 989.269 kb on + strand, within B158DRAFT_0958 at 989.281 kb on - strand, within B158DRAFT_0958 at 989.291 kb on - strand, within B158DRAFT_0958 at 989.437 kb on + strand, within B158DRAFT_0958 at 989.637 kb on + strand at 989.637 kb on + strand at 989.637 kb on + strand at 989.637 kb on + strand at 989.637 kb on + strand at 989.645 kb on - strand at 989.645 kb on - strand at 989.645 kb on - strand at 989.645 kb on - strand at 989.657 kb on - strand at 989.675 kb on - strand at 989.701 kb on + strand at 989.701 kb on + strand at 989.706 kb on + strand at 989.715 kb on + strand at 989.723 kb on - strand at 989.994 kb on - strand at 990.027 kb on + strand at 990.258 kb on + strand, within B158DRAFT_0959 at 990.322 kb on - strand, within B158DRAFT_0959 at 990.356 kb on + strand, within B158DRAFT_0959 at 990.502 kb on + strand, within B158DRAFT_0959 at 990.653 kb on + strand, within B158DRAFT_0959 at 990.709 kb on - strand, within B158DRAFT_0959 at 990.940 kb on + strand at 990.993 kb on + strand at 991.001 kb on - strand at 991.015 kb on - strand at 991.094 kb on + strand at 991.094 kb on + strand at 991.150 kb on + strand, within B158DRAFT_0960 at 991.150 kb on + strand, within B158DRAFT_0960 at 991.258 kb on + strand, within B158DRAFT_0960 at 991.286 kb on + strand, within B158DRAFT_0960 at 991.294 kb on - strand, within B158DRAFT_0960 at 991.405 kb on + strand, within B158DRAFT_0960 at 991.422 kb on + strand, within B158DRAFT_0960 at 991.422 kb on + strand, within B158DRAFT_0960 at 991.430 kb on - strand, within B158DRAFT_0960 at 991.430 kb on - strand, within B158DRAFT_0960 at 991.440 kb on - strand, within B158DRAFT_0960 at 991.461 kb on - strand, within B158DRAFT_0960 at 991.492 kb on - strand, within B158DRAFT_0960 at 991.548 kb on - strand, within B158DRAFT_0960 at 991.654 kb on + strand at 991.678 kb on + strand at 991.723 kb on + strand at 991.731 kb on - strand at 991.735 kb on + strand at 991.794 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 989,142 - B158DRAFT_0958 0.27 -0.5 989,156 + B158DRAFT_0958 0.30 +0.5 989,252 + B158DRAFT_0958 0.47 -0.4 989,260 - B158DRAFT_0958 0.48 -0.1 989,265 - B158DRAFT_0958 0.49 +0.2 989,269 + B158DRAFT_0958 0.50 +0.6 989,281 - B158DRAFT_0958 0.52 -0.7 989,291 - B158DRAFT_0958 0.53 +0.0 989,437 + B158DRAFT_0958 0.79 +0.4 989,637 + +0.7 989,637 + +0.0 989,637 + -0.0 989,637 + -0.1 989,637 + +0.3 989,645 - +0.1 989,645 - -0.4 989,645 - -0.6 989,645 - -0.5 989,657 - -0.6 989,675 - +0.1 989,701 + +0.5 989,701 + -0.4 989,706 + -0.4 989,715 + -0.2 989,723 - -0.7 989,994 - -0.2 990,027 + -2.1 990,258 + B158DRAFT_0959 0.19 -0.2 990,322 - B158DRAFT_0959 0.28 -1.8 990,356 + B158DRAFT_0959 0.33 -0.2 990,502 + B158DRAFT_0959 0.55 -0.1 990,653 + B158DRAFT_0959 0.78 -0.8 990,709 - B158DRAFT_0959 0.86 -0.7 990,940 + -0.8 990,993 + -1.4 991,001 - +0.0 991,015 - +0.0 991,094 + -0.1 991,094 + -0.4 991,150 + B158DRAFT_0960 0.12 -0.3 991,150 + B158DRAFT_0960 0.12 -1.0 991,258 + B158DRAFT_0960 0.32 -0.9 991,286 + B158DRAFT_0960 0.37 -0.5 991,294 - B158DRAFT_0960 0.38 -0.3 991,405 + B158DRAFT_0960 0.58 +0.3 991,422 + B158DRAFT_0960 0.61 -0.1 991,422 + B158DRAFT_0960 0.61 -0.7 991,430 - B158DRAFT_0960 0.63 -0.7 991,430 - B158DRAFT_0960 0.63 -0.3 991,440 - B158DRAFT_0960 0.65 +0.1 991,461 - B158DRAFT_0960 0.68 +0.7 991,492 - B158DRAFT_0960 0.74 +0.6 991,548 - B158DRAFT_0960 0.84 +0.1 991,654 + -1.0 991,678 + +0.4 991,723 + +0.5 991,731 - -1.6 991,735 + -0.1 991,794 + -0.1
Or see this region's nucleotide sequence