Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0754

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0752 and B158DRAFT_0753 are separated by 24 nucleotidesB158DRAFT_0753 and B158DRAFT_0754 are separated by 24 nucleotidesB158DRAFT_0754 and B158DRAFT_0755 are separated by 32 nucleotides B158DRAFT_0752: B158DRAFT_0752 - hypothetical protein, at 757,097 to 757,627 _0752 B158DRAFT_0753: B158DRAFT_0753 - hypothetical protein, at 757,652 to 758,290 _0753 B158DRAFT_0754: B158DRAFT_0754 - P pilus assembly protein, chaperone PapD, at 758,315 to 759,166 _0754 B158DRAFT_0755: B158DRAFT_0755 - hypothetical protein, at 759,199 to 761,853 _0755 Position (kb) 758 759 760Strain fitness (log2 ratio) -1 0 1at 757.322 kb on + strand, within B158DRAFT_0752at 757.337 kb on - strand, within B158DRAFT_0752at 757.382 kb on + strand, within B158DRAFT_0752at 757.386 kb on + strand, within B158DRAFT_0752at 757.394 kb on - strand, within B158DRAFT_0752at 757.409 kb on + strand, within B158DRAFT_0752at 757.414 kb on + strand, within B158DRAFT_0752at 757.416 kb on + strand, within B158DRAFT_0752at 757.416 kb on + strand, within B158DRAFT_0752at 757.424 kb on - strand, within B158DRAFT_0752at 757.613 kb on + strandat 757.646 kb on + strandat 757.646 kb on + strandat 757.654 kb on - strandat 757.654 kb on - strandat 757.700 kb on + strandat 757.715 kb on - strandat 757.724 kb on + strand, within B158DRAFT_0753at 757.724 kb on + strand, within B158DRAFT_0753at 757.732 kb on - strand, within B158DRAFT_0753at 757.744 kb on + strand, within B158DRAFT_0753at 757.744 kb on + strand, within B158DRAFT_0753at 757.749 kb on + strand, within B158DRAFT_0753at 757.759 kb on + strand, within B158DRAFT_0753at 757.759 kb on + strand, within B158DRAFT_0753at 757.801 kb on + strand, within B158DRAFT_0753at 757.801 kb on + strand, within B158DRAFT_0753at 757.801 kb on + strand, within B158DRAFT_0753at 757.801 kb on + strand, within B158DRAFT_0753at 757.809 kb on - strand, within B158DRAFT_0753at 757.809 kb on - strand, within B158DRAFT_0753at 757.809 kb on - strand, within B158DRAFT_0753at 757.809 kb on - strand, within B158DRAFT_0753at 757.809 kb on - strand, within B158DRAFT_0753at 757.819 kb on + strand, within B158DRAFT_0753at 757.829 kb on + strand, within B158DRAFT_0753at 757.834 kb on + strand, within B158DRAFT_0753at 757.837 kb on - strand, within B158DRAFT_0753at 757.837 kb on - strand, within B158DRAFT_0753at 757.842 kb on - strand, within B158DRAFT_0753at 757.856 kb on + strand, within B158DRAFT_0753at 757.963 kb on - strand, within B158DRAFT_0753at 757.963 kb on - strand, within B158DRAFT_0753at 757.988 kb on - strand, within B158DRAFT_0753at 757.988 kb on - strand, within B158DRAFT_0753at 757.988 kb on - strand, within B158DRAFT_0753at 758.065 kb on + strand, within B158DRAFT_0753at 758.075 kb on + strand, within B158DRAFT_0753at 758.105 kb on + strand, within B158DRAFT_0753at 758.140 kb on + strand, within B158DRAFT_0753at 758.148 kb on - strand, within B158DRAFT_0753at 758.148 kb on - strand, within B158DRAFT_0753at 758.148 kb on - strand, within B158DRAFT_0753at 758.148 kb on - strand, within B158DRAFT_0753at 758.162 kb on + strand, within B158DRAFT_0753at 758.162 kb on + strand, within B158DRAFT_0753at 758.162 kb on + strand, within B158DRAFT_0753at 758.170 kb on - strand, within B158DRAFT_0753at 758.172 kb on + strand, within B158DRAFT_0753at 758.172 kb on + strand, within B158DRAFT_0753at 758.172 kb on + strand, within B158DRAFT_0753at 758.172 kb on + strand, within B158DRAFT_0753at 758.180 kb on - strand, within B158DRAFT_0753at 758.180 kb on - strand, within B158DRAFT_0753at 758.180 kb on - strand, within B158DRAFT_0753at 758.320 kb on - strandat 758.334 kb on + strandat 758.342 kb on - strandat 758.342 kb on - strandat 758.475 kb on + strand, within B158DRAFT_0754at 758.483 kb on + strand, within B158DRAFT_0754at 758.491 kb on - strand, within B158DRAFT_0754at 758.491 kb on - strand, within B158DRAFT_0754at 758.491 kb on - strand, within B158DRAFT_0754at 758.491 kb on - strand, within B158DRAFT_0754at 758.491 kb on - strand, within B158DRAFT_0754at 758.586 kb on + strand, within B158DRAFT_0754at 758.586 kb on + strand, within B158DRAFT_0754at 758.587 kb on - strand, within B158DRAFT_0754at 758.605 kb on + strand, within B158DRAFT_0754at 758.605 kb on + strand, within B158DRAFT_0754at 758.613 kb on - strand, within B158DRAFT_0754at 758.613 kb on - strand, within B158DRAFT_0754at 758.613 kb on - strand, within B158DRAFT_0754at 758.613 kb on - strand, within B158DRAFT_0754at 758.613 kb on - strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.734 kb on + strand, within B158DRAFT_0754at 758.737 kb on - strand, within B158DRAFT_0754at 758.742 kb on - strand, within B158DRAFT_0754at 758.742 kb on - strand, within B158DRAFT_0754at 758.742 kb on - strand, within B158DRAFT_0754at 758.742 kb on - strand, within B158DRAFT_0754at 758.742 kb on - strand, within B158DRAFT_0754at 758.742 kb on - strand, within B158DRAFT_0754at 758.763 kb on - strand, within B158DRAFT_0754at 758.898 kb on - strand, within B158DRAFT_0754at 759.043 kb on - strand, within B158DRAFT_0754at 759.052 kb on + strand, within B158DRAFT_0754at 759.060 kb on - strand, within B158DRAFT_0754at 759.086 kb on - strandat 759.090 kb on + strandat 759.091 kb on - strandat 759.148 kb on + strandat 759.167 kb on + strandat 759.217 kb on + strandat 759.225 kb on - strandat 759.265 kb on - strandat 759.327 kb on - strandat 759.327 kb on - strandat 759.327 kb on - strandat 759.383 kb on - strandat 759.400 kb on - strandat 759.400 kb on - strandat 759.419 kb on + strandat 759.419 kb on + strandat 759.419 kb on + strandat 759.419 kb on + strandat 759.419 kb on + strandat 759.419 kb on + strandat 759.419 kb on + strandat 759.419 kb on + strandat 759.427 kb on - strandat 759.427 kb on - strandat 759.427 kb on - strandat 759.473 kb on - strand, within B158DRAFT_0755at 759.506 kb on - strand, within B158DRAFT_0755at 759.529 kb on + strand, within B158DRAFT_0755at 759.529 kb on - strand, within B158DRAFT_0755at 759.541 kb on + strand, within B158DRAFT_0755at 759.541 kb on + strand, within B158DRAFT_0755at 759.620 kb on - strand, within B158DRAFT_0755at 759.624 kb on + strand, within B158DRAFT_0755at 759.632 kb on - strand, within B158DRAFT_0755at 759.652 kb on - strand, within B158DRAFT_0755at 759.689 kb on + strand, within B158DRAFT_0755at 759.761 kb on + strand, within B158DRAFT_0755at 759.764 kb on - strand, within B158DRAFT_0755at 759.764 kb on - strand, within B158DRAFT_0755at 759.769 kb on - strand, within B158DRAFT_0755at 759.769 kb on - strand, within B158DRAFT_0755at 759.769 kb on - strand, within B158DRAFT_0755at 759.769 kb on - strand, within B158DRAFT_0755at 759.769 kb on - strand, within B158DRAFT_0755at 759.778 kb on - strand, within B158DRAFT_0755at 759.778 kb on - strand, within B158DRAFT_0755at 759.812 kb on - strand, within B158DRAFT_0755at 759.832 kb on + strand, within B158DRAFT_0755at 759.840 kb on - strand, within B158DRAFT_0755at 759.895 kb on + strand, within B158DRAFT_0755at 759.896 kb on + strand, within B158DRAFT_0755at 759.896 kb on + strand, within B158DRAFT_0755at 759.897 kb on - strand, within B158DRAFT_0755at 759.904 kb on - strand, within B158DRAFT_0755at 759.904 kb on - strand, within B158DRAFT_0755at 759.904 kb on - strand, within B158DRAFT_0755at 759.904 kb on - strand, within B158DRAFT_0755at 760.056 kb on + strand, within B158DRAFT_0755at 760.133 kb on + strand, within B158DRAFT_0755at 760.141 kb on - strand, within B158DRAFT_0755at 760.141 kb on - strand, within B158DRAFT_0755at 760.141 kb on - strand, within B158DRAFT_0755at 760.141 kb on - strand, within B158DRAFT_0755at 760.157 kb on + strand, within B158DRAFT_0755at 760.157 kb on + strand, within B158DRAFT_0755at 760.157 kb on + strand, within B158DRAFT_0755at 760.157 kb on + strand, within B158DRAFT_0755at 760.157 kb on + strand, within B158DRAFT_0755at 760.157 kb on + strand, within B158DRAFT_0755at 760.157 kb on + strand, within B158DRAFT_0755at 760.157 kb on + strand, within B158DRAFT_0755at 760.162 kb on - strand, within B158DRAFT_0755at 760.165 kb on - strand, within B158DRAFT_0755at 760.165 kb on - strand, within B158DRAFT_0755at 760.165 kb on - strand, within B158DRAFT_0755at 760.165 kb on - strand, within B158DRAFT_0755

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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757,322 + B158DRAFT_0752 0.42 -0.4
757,337 - B158DRAFT_0752 0.45 -0.2
757,382 + B158DRAFT_0752 0.54 -0.8
757,386 + B158DRAFT_0752 0.54 -1.7
757,394 - B158DRAFT_0752 0.56 -1.4
757,409 + B158DRAFT_0752 0.59 -0.6
757,414 + B158DRAFT_0752 0.60 -0.7
757,416 + B158DRAFT_0752 0.60 -0.4
757,416 + B158DRAFT_0752 0.60 -0.4
757,424 - B158DRAFT_0752 0.62 -0.2
757,613 + -0.0
757,646 + +0.2
757,646 + -0.3
757,654 - -1.1
757,654 - +0.5
757,700 + +0.0
757,715 - +0.6
757,724 + B158DRAFT_0753 0.11 -0.7
757,724 + B158DRAFT_0753 0.11 +0.1
757,732 - B158DRAFT_0753 0.13 -0.4
757,744 + B158DRAFT_0753 0.14 -0.2
757,744 + B158DRAFT_0753 0.14 -0.2
757,749 + B158DRAFT_0753 0.15 +0.2
757,759 + B158DRAFT_0753 0.17 -0.2
757,759 + B158DRAFT_0753 0.17 -0.7
757,801 + B158DRAFT_0753 0.23 +0.3
757,801 + B158DRAFT_0753 0.23 -0.9
757,801 + B158DRAFT_0753 0.23 -0.4
757,801 + B158DRAFT_0753 0.23 -1.0
757,809 - B158DRAFT_0753 0.25 +0.7
757,809 - B158DRAFT_0753 0.25 -1.1
757,809 - B158DRAFT_0753 0.25 -0.4
757,809 - B158DRAFT_0753 0.25 +0.4
757,809 - B158DRAFT_0753 0.25 -0.3
757,819 + B158DRAFT_0753 0.26 -0.2
757,829 + B158DRAFT_0753 0.28 -0.2
757,834 + B158DRAFT_0753 0.28 +0.3
757,837 - B158DRAFT_0753 0.29 -0.8
757,837 - B158DRAFT_0753 0.29 +1.5
757,842 - B158DRAFT_0753 0.30 -0.2
757,856 + B158DRAFT_0753 0.32 +0.4
757,963 - B158DRAFT_0753 0.49 -0.6
757,963 - B158DRAFT_0753 0.49 -0.1
757,988 - B158DRAFT_0753 0.53 -0.1
757,988 - B158DRAFT_0753 0.53 -1.1
757,988 - B158DRAFT_0753 0.53 -0.1
758,065 + B158DRAFT_0753 0.65 -0.6
758,075 + B158DRAFT_0753 0.66 -0.5
758,105 + B158DRAFT_0753 0.71 -0.6
758,140 + B158DRAFT_0753 0.76 -0.3
758,148 - B158DRAFT_0753 0.78 -0.3
758,148 - B158DRAFT_0753 0.78 -0.1
758,148 - B158DRAFT_0753 0.78 -0.8
758,148 - B158DRAFT_0753 0.78 +0.2
758,162 + B158DRAFT_0753 0.80 +0.8
758,162 + B158DRAFT_0753 0.80 +0.3
758,162 + B158DRAFT_0753 0.80 +0.0
758,170 - B158DRAFT_0753 0.81 -0.1
758,172 + B158DRAFT_0753 0.81 -0.3
758,172 + B158DRAFT_0753 0.81 -0.8
758,172 + B158DRAFT_0753 0.81 -0.8
758,172 + B158DRAFT_0753 0.81 +0.4
758,180 - B158DRAFT_0753 0.83 -0.6
758,180 - B158DRAFT_0753 0.83 -0.1
758,180 - B158DRAFT_0753 0.83 -0.4
758,320 - -0.3
758,334 + -0.3
758,342 - -0.0
758,342 - +1.0
758,475 + B158DRAFT_0754 0.19 +0.2
758,483 + B158DRAFT_0754 0.20 +0.1
758,491 - B158DRAFT_0754 0.21 -1.0
758,491 - B158DRAFT_0754 0.21 -0.1
758,491 - B158DRAFT_0754 0.21 -0.5
758,491 - B158DRAFT_0754 0.21 -1.5
758,491 - B158DRAFT_0754 0.21 -1.0
758,586 + B158DRAFT_0754 0.32 -1.2
758,586 + B158DRAFT_0754 0.32 -0.5
758,587 - B158DRAFT_0754 0.32 +0.9
758,605 + B158DRAFT_0754 0.34 +0.0
758,605 + B158DRAFT_0754 0.34 -0.8
758,613 - B158DRAFT_0754 0.35 -0.1
758,613 - B158DRAFT_0754 0.35 +0.1
758,613 - B158DRAFT_0754 0.35 +0.1
758,613 - B158DRAFT_0754 0.35 +0.2
758,613 - B158DRAFT_0754 0.35 +0.5
758,734 + B158DRAFT_0754 0.49 +0.3
758,734 + B158DRAFT_0754 0.49 -0.6
758,734 + B158DRAFT_0754 0.49 +0.0
758,734 + B158DRAFT_0754 0.49 -1.2
758,734 + B158DRAFT_0754 0.49 -0.1
758,734 + B158DRAFT_0754 0.49 -0.2
758,734 + B158DRAFT_0754 0.49 -0.2
758,734 + B158DRAFT_0754 0.49 +0.0
758,734 + B158DRAFT_0754 0.49 +0.1
758,734 + B158DRAFT_0754 0.49 -1.5
758,737 - B158DRAFT_0754 0.50 -0.5
758,742 - B158DRAFT_0754 0.50 -0.6
758,742 - B158DRAFT_0754 0.50 -0.4
758,742 - B158DRAFT_0754 0.50 -0.4
758,742 - B158DRAFT_0754 0.50 -0.1
758,742 - B158DRAFT_0754 0.50 -0.1
758,742 - B158DRAFT_0754 0.50 +0.1
758,763 - B158DRAFT_0754 0.53 -1.3
758,898 - B158DRAFT_0754 0.68 -1.5
759,043 - B158DRAFT_0754 0.85 -0.3
759,052 + B158DRAFT_0754 0.87 +0.1
759,060 - B158DRAFT_0754 0.87 -0.7
759,086 - +0.2
759,090 + -0.3
759,091 - +0.0
759,148 + -0.6
759,167 + -0.4
759,217 + +0.7
759,225 - +0.5
759,265 - -0.7
759,327 - +0.4
759,327 - -0.1
759,327 - -1.1
759,383 - -0.0
759,400 - +0.4
759,400 - -0.5
759,419 + -0.2
759,419 + -0.4
759,419 + +0.6
759,419 + +0.1
759,419 + -0.2
759,419 + -0.3
759,419 + +0.2
759,419 + -0.2
759,427 - +0.4
759,427 - -0.4
759,427 - +0.8
759,473 - B158DRAFT_0755 0.10 -0.2
759,506 - B158DRAFT_0755 0.12 -0.9
759,529 + B158DRAFT_0755 0.12 +0.3
759,529 - B158DRAFT_0755 0.12 -0.2
759,541 + B158DRAFT_0755 0.13 -0.9
759,541 + B158DRAFT_0755 0.13 +0.3
759,620 - B158DRAFT_0755 0.16 -1.0
759,624 + B158DRAFT_0755 0.16 -0.4
759,632 - B158DRAFT_0755 0.16 -0.4
759,652 - B158DRAFT_0755 0.17 -0.3
759,689 + B158DRAFT_0755 0.18 -0.8
759,761 + B158DRAFT_0755 0.21 -0.4
759,764 - B158DRAFT_0755 0.21 -0.3
759,764 - B158DRAFT_0755 0.21 -1.6
759,769 - B158DRAFT_0755 0.21 -0.4
759,769 - B158DRAFT_0755 0.21 -0.7
759,769 - B158DRAFT_0755 0.21 +0.4
759,769 - B158DRAFT_0755 0.21 +0.1
759,769 - B158DRAFT_0755 0.21 +0.4
759,778 - B158DRAFT_0755 0.22 +0.1
759,778 - B158DRAFT_0755 0.22 +0.8
759,812 - B158DRAFT_0755 0.23 +0.2
759,832 + B158DRAFT_0755 0.24 -1.4
759,840 - B158DRAFT_0755 0.24 -0.9
759,895 + B158DRAFT_0755 0.26 -1.0
759,896 + B158DRAFT_0755 0.26 +0.1
759,896 + B158DRAFT_0755 0.26 +0.8
759,897 - B158DRAFT_0755 0.26 -1.3
759,904 - B158DRAFT_0755 0.27 +0.2
759,904 - B158DRAFT_0755 0.27 +0.4
759,904 - B158DRAFT_0755 0.27 -1.6
759,904 - B158DRAFT_0755 0.27 -0.2
760,056 + B158DRAFT_0755 0.32 -0.6
760,133 + B158DRAFT_0755 0.35 -0.3
760,141 - B158DRAFT_0755 0.35 -0.3
760,141 - B158DRAFT_0755 0.35 -0.2
760,141 - B158DRAFT_0755 0.35 +0.1
760,141 - B158DRAFT_0755 0.35 -0.2
760,157 + B158DRAFT_0755 0.36 -1.3
760,157 + B158DRAFT_0755 0.36 -0.7
760,157 + B158DRAFT_0755 0.36 -0.1
760,157 + B158DRAFT_0755 0.36 -0.4
760,157 + B158DRAFT_0755 0.36 +0.2
760,157 + B158DRAFT_0755 0.36 -0.0
760,157 + B158DRAFT_0755 0.36 +0.0
760,157 + B158DRAFT_0755 0.36 -0.2
760,162 - B158DRAFT_0755 0.36 -0.6
760,165 - B158DRAFT_0755 0.36 -0.4
760,165 - B158DRAFT_0755 0.36 -0.7
760,165 - B158DRAFT_0755 0.36 -0.4
760,165 - B158DRAFT_0755 0.36 -1.5

Or see this region's nucleotide sequence