Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0205 and B158DRAFT_0206 are separated by 50 nucleotides B158DRAFT_0206 and B158DRAFT_0207 are separated by 91 nucleotides B158DRAFT_0207 and B158DRAFT_0208 are separated by 158 nucleotides B158DRAFT_0208 and B158DRAFT_0209 overlap by 50 nucleotides B158DRAFT_0209 and B158DRAFT_0210 are separated by 1 nucleotides
B158DRAFT_0205: B158DRAFT_0205 - A/G-specific DNA-adenine glycosylase (EC 3.2.2.-), at 211,271 to 212,326
_0205
B158DRAFT_0206: B158DRAFT_0206 - Fe-S cluster protector protein, at 212,377 to 212,652
_0206
B158DRAFT_0207: B158DRAFT_0207 - tRNA_Phe_GAA, at 212,744 to 212,819
_0207
B158DRAFT_0208: B158DRAFT_0208 - N-6 DNA Methylase., at 212,978 to 214,108
_0208
B158DRAFT_0209: B158DRAFT_0209 - hypothetical protein, at 214,059 to 214,979
_0209
B158DRAFT_0210: B158DRAFT_0210 - hypothetical protein, at 214,981 to 216,858
_0210
Position (kb) 212
213
214
215 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 211.998 kb on - strand, within B158DRAFT_0205 at 212.028 kb on - strand, within B158DRAFT_0205 at 212.034 kb on + strand, within B158DRAFT_0205 at 212.041 kb on + strand, within B158DRAFT_0205 at 212.046 kb on + strand, within B158DRAFT_0205 at 212.046 kb on + strand, within B158DRAFT_0205 at 212.053 kb on + strand, within B158DRAFT_0205 at 212.053 kb on + strand, within B158DRAFT_0205 at 212.054 kb on - strand, within B158DRAFT_0205 at 212.054 kb on - strand, within B158DRAFT_0205 at 212.061 kb on - strand, within B158DRAFT_0205 at 212.061 kb on - strand, within B158DRAFT_0205 at 212.061 kb on - strand, within B158DRAFT_0205 at 212.086 kb on + strand, within B158DRAFT_0205 at 212.091 kb on + strand, within B158DRAFT_0205 at 212.099 kb on - strand, within B158DRAFT_0205 at 212.162 kb on + strand, within B158DRAFT_0205 at 212.162 kb on + strand, within B158DRAFT_0205 at 212.170 kb on - strand, within B158DRAFT_0205 at 212.180 kb on - strand, within B158DRAFT_0205 at 212.221 kb on + strand at 212.244 kb on + strand at 212.252 kb on - strand at 212.252 kb on - strand at 212.258 kb on - strand at 212.273 kb on + strand at 212.347 kb on + strand at 212.438 kb on - strand, within B158DRAFT_0206 at 212.547 kb on + strand, within B158DRAFT_0206 at 212.598 kb on + strand, within B158DRAFT_0206 at 212.626 kb on + strand at 212.891 kb on + strand at 212.898 kb on - strand at 213.061 kb on + strand at 213.367 kb on + strand, within B158DRAFT_0208 at 213.381 kb on - strand, within B158DRAFT_0208 at 213.435 kb on + strand, within B158DRAFT_0208 at 213.515 kb on - strand, within B158DRAFT_0208 at 213.833 kb on + strand, within B158DRAFT_0208 at 214.080 kb on + strand at 214.184 kb on - strand, within B158DRAFT_0209 at 214.198 kb on - strand, within B158DRAFT_0209 at 214.238 kb on + strand, within B158DRAFT_0209 at 214.265 kb on + strand, within B158DRAFT_0209 at 214.345 kb on + strand, within B158DRAFT_0209 at 214.452 kb on + strand, within B158DRAFT_0209 at 214.485 kb on + strand, within B158DRAFT_0209 at 214.487 kb on + strand, within B158DRAFT_0209 at 214.487 kb on + strand, within B158DRAFT_0209 at 214.495 kb on - strand, within B158DRAFT_0209 at 214.495 kb on - strand, within B158DRAFT_0209 at 214.495 kb on - strand, within B158DRAFT_0209 at 214.495 kb on - strand, within B158DRAFT_0209 at 214.655 kb on - strand, within B158DRAFT_0209 at 214.675 kb on - strand, within B158DRAFT_0209 at 214.957 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 211,998 - B158DRAFT_0205 0.69 -0.2 212,028 - B158DRAFT_0205 0.72 -0.7 212,034 + B158DRAFT_0205 0.72 +0.1 212,041 + B158DRAFT_0205 0.73 -0.3 212,046 + B158DRAFT_0205 0.73 -0.3 212,046 + B158DRAFT_0205 0.73 +0.3 212,053 + B158DRAFT_0205 0.74 -0.6 212,053 + B158DRAFT_0205 0.74 -0.2 212,054 - B158DRAFT_0205 0.74 -1.0 212,054 - B158DRAFT_0205 0.74 -0.4 212,061 - B158DRAFT_0205 0.75 +0.4 212,061 - B158DRAFT_0205 0.75 +0.2 212,061 - B158DRAFT_0205 0.75 -0.6 212,086 + B158DRAFT_0205 0.77 +0.2 212,091 + B158DRAFT_0205 0.78 -0.6 212,099 - B158DRAFT_0205 0.78 -0.6 212,162 + B158DRAFT_0205 0.84 +0.9 212,162 + B158DRAFT_0205 0.84 -0.7 212,170 - B158DRAFT_0205 0.85 +0.9 212,180 - B158DRAFT_0205 0.86 -0.2 212,221 + -0.5 212,244 + -0.7 212,252 - -0.4 212,252 - +0.9 212,258 - +0.5 212,273 + -0.2 212,347 + -0.7 212,438 - B158DRAFT_0206 0.22 -1.2 212,547 + B158DRAFT_0206 0.62 +1.0 212,598 + B158DRAFT_0206 0.80 -0.5 212,626 + +1.7 212,891 + -0.1 212,898 - -1.6 213,061 + -1.1 213,367 + B158DRAFT_0208 0.34 -2.3 213,381 - B158DRAFT_0208 0.36 -3.5 213,435 + B158DRAFT_0208 0.40 -2.2 213,515 - B158DRAFT_0208 0.47 -2.6 213,833 + B158DRAFT_0208 0.76 -1.6 214,080 + -1.1 214,184 - B158DRAFT_0209 0.14 +0.8 214,198 - B158DRAFT_0209 0.15 +0.7 214,238 + B158DRAFT_0209 0.19 +0.3 214,265 + B158DRAFT_0209 0.22 -0.4 214,345 + B158DRAFT_0209 0.31 -0.3 214,452 + B158DRAFT_0209 0.43 -0.7 214,485 + B158DRAFT_0209 0.46 -0.1 214,487 + B158DRAFT_0209 0.46 -0.6 214,487 + B158DRAFT_0209 0.46 +0.6 214,495 - B158DRAFT_0209 0.47 -0.0 214,495 - B158DRAFT_0209 0.47 -0.3 214,495 - B158DRAFT_0209 0.47 -0.3 214,495 - B158DRAFT_0209 0.47 -0.8 214,655 - B158DRAFT_0209 0.65 -1.0 214,675 - B158DRAFT_0209 0.67 +0.6 214,957 - +0.6
Or see this region's nucleotide sequence