Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1110

Experiment: L-Threonine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Threonine (N)
1,231,385	+		PfGW456L13_1109	0.87	-0.1
1,231,385	+		PfGW456L13_1109	0.87	+0.0
1,231,385	+		PfGW456L13_1109	0.87	-0.9
1,231,386	-		PfGW456L13_1109	0.87	+0.4
1,231,386	-		PfGW456L13_1109	0.87	-0.9
1,231,386	-		PfGW456L13_1109	0.87	-1.5
1,231,386	-		PfGW456L13_1109	0.87	+0.0
1,231,386	-		PfGW456L13_1109	0.87	-0.3
1,231,391	+		PfGW456L13_1109	0.88	+2.1
1,231,391	+		PfGW456L13_1109	0.88	-0.9
1,231,391	+		PfGW456L13_1109	0.88	+0.2
1,231,391	+		PfGW456L13_1109	0.88	-0.3
1,231,391	+		PfGW456L13_1109	0.88	+0.2
1,231,391	+		PfGW456L13_1109	0.88	-0.1
1,231,392	-		PfGW456L13_1109	0.88	+0.8
1,231,392	-		PfGW456L13_1109	0.88	-0.1
1,231,392	-		PfGW456L13_1109	0.88	-0.5
1,231,392	-		PfGW456L13_1109	0.88	+1.5
1,231,392	-		PfGW456L13_1109	0.88	+1.2
1,231,392	-		PfGW456L13_1109	0.88	-0.1
1,231,392	-		PfGW456L13_1109	0.88	-0.1
1,231,392	-		PfGW456L13_1109	0.88	-0.0
1,231,392	-		PfGW456L13_1109	0.88	+0.3
1,231,392	-		PfGW456L13_1109	0.88	+0.5
1,231,392	-		PfGW456L13_1109	0.88	-1.7
1,231,392	-		PfGW456L13_1109	0.88	+0.3
1,231,392	-		PfGW456L13_1109	0.88	+0.3
1,231,392	-		PfGW456L13_1109	0.88	+0.7
1,231,394	+		PfGW456L13_1109	0.88	-0.1
1,231,436	+				-0.5
1,231,436	+				-0.4
1,231,436	+				+0.7
1,231,436	+				-0.8
1,231,436	+				+1.3
1,231,437	-				-0.5
1,231,437	-				-1.1
1,231,437	-				+0.8
1,231,449	+				-1.0
1,231,522	+				-0.7
1,231,522	+				-0.9
1,231,683	+				+0.1
1,231,683	+				+0.4
1,231,684	-				-0.1
1,231,766	+				+0.4
1,231,766	+				-0.9
1,231,768	+				-0.1
1,231,768	+				+0.8
1,231,769	-				+0.1
1,231,797	-				+1.2
1,231,797	-				-2.5
1,231,955	-				+0.4
1,232,017	+				-0.3
1,232,018	-				+0.4
1,232,081	+				-2.8
1,232,081	+				+0.5
1,232,082	-				+1.0
1,232,140	+				-0.6
1,232,141	-				-0.8
1,232,155	+				+0.4
1,232,155	+				-0.1
1,232,162	+				-0.3
1,232,183	+				+0.3
1,232,183	+				-0.7
1,232,184	-				+1.3
1,232,325	+				-1.0
1,232,325	+				+0.4
1,232,326	-				+0.9
1,232,326	-				+0.2
1,232,445	+				+0.1
1,232,445	+				-1.9
1,232,446	-				+0.0
1,232,446	-				-2.1
1,232,446	-				+0.9
1,232,446	-				-1.4
1,232,458	-				+0.3
1,232,850	+		PfGW456L13_1110	0.39	-0.0
1,232,891	+		PfGW456L13_1110	0.43	+0.5
1,232,891	+		PfGW456L13_1110	0.43	-0.3
1,232,891	+		PfGW456L13_1110	0.43	-0.5
1,232,891	+		PfGW456L13_1110	0.43	+0.3
1,232,892	-		PfGW456L13_1110	0.43	+0.1
1,232,892	-		PfGW456L13_1110	0.43	+0.2
1,232,892	-		PfGW456L13_1110	0.43	-0.1
1,232,892	-		PfGW456L13_1110	0.43	-1.1
1,232,892	-		PfGW456L13_1110	0.43	-0.1
1,232,988	+		PfGW456L13_1110	0.50	+0.2
1,232,989	-		PfGW456L13_1110	0.50	+0.6
1,233,079	-		PfGW456L13_1110	0.57	+2.3
1,233,090	+		PfGW456L13_1110	0.58	+0.6
1,233,090	+		PfGW456L13_1110	0.58	+0.6
1,233,090	+		PfGW456L13_1110	0.58	-0.2
1,233,090	+		PfGW456L13_1110	0.58	+0.4
1,233,090	+		PfGW456L13_1110	0.58	+0.1
1,233,090	+		PfGW456L13_1110	0.58	+0.1
1,233,090	+		PfGW456L13_1110	0.58	-1.0
1,233,091	-		PfGW456L13_1110	0.58	-0.2
1,233,091	-		PfGW456L13_1110	0.58	+0.3
1,233,091	-		PfGW456L13_1110	0.58	+1.3
1,233,156	+		PfGW456L13_1110	0.63	-1.1
1,233,156	+		PfGW456L13_1110	0.63	+0.5
1,233,156	+		PfGW456L13_1110	0.63	-1.8
1,233,157	-		PfGW456L13_1110	0.63	-0.7
1,233,157	-		PfGW456L13_1110	0.63	-0.8
1,233,157	-		PfGW456L13_1110	0.63	+1.6
1,233,261	+		PfGW456L13_1110	0.71	+0.1
1,233,261	+		PfGW456L13_1110	0.71	-0.9
1,233,261	+		PfGW456L13_1110	0.71	+0.3
1,233,261	+		PfGW456L13_1110	0.71	+0.0
1,233,262	-		PfGW456L13_1110	0.71	-0.6
1,233,262	-		PfGW456L13_1110	0.71	+0.3
1,233,277	-		PfGW456L13_1110	0.72	+1.6
1,233,423	+		PfGW456L13_1110	0.84	-1.7
1,233,423	+		PfGW456L13_1110	0.84	+0.2
1,233,424	-		PfGW456L13_1110	0.84	-0.5
1,233,424	-		PfGW456L13_1110	0.84	+0.8
1,233,424	-		PfGW456L13_1110	0.84	+0.5
1,233,424	-		PfGW456L13_1110	0.84	+0.9
1,233,424	-		PfGW456L13_1110	0.84	+0.8
1,233,437	-		PfGW456L13_1110	0.85	-0.1
1,233,523	-				-1.8
1,233,619	+				+0.2
1,233,619	+				-1.3
1,233,619	+				-0.4
1,233,622	+				-1.1
1,233,622	+				+0.2
1,233,622	+				-0.5
1,233,622	+				-2.0
1,233,623	-				+0.8
1,233,623	-				+0.4
1,233,623	-				-0.1
1,233,639	+				+0.5
1,233,640	-				+0.3
1,233,640	-				+0.3
1,233,640	-				+0.2
1,233,640	-				+0.9
1,233,640	-				-0.4
1,233,640	-				-1.6
1,233,690	+				+0.1
1,233,690	+				-0.4
1,233,691	-				+1.5
1,233,691	-				+1.7
1,233,701	+				-0.2
1,233,701	+				+0.2
1,233,702	-				+2.1
1,233,719	-		PfGW456L13_1111	0.15	+0.4
1,233,844	+		PfGW456L13_1111	0.78	+0.4
1,233,844	+		PfGW456L13_1111	0.78	-0.5
1,233,845	-		PfGW456L13_1111	0.79	-0.8
1,233,848	+		PfGW456L13_1111	0.80	-0.0
1,233,848	+		PfGW456L13_1111	0.80	-0.8
1,233,848	+		PfGW456L13_1111	0.80	-0.1
1,233,849	-		PfGW456L13_1111	0.81	+0.1
1,233,849	-		PfGW456L13_1111	0.81	+1.1
1,233,849	-		PfGW456L13_1111	0.81	-0.0
1,233,868	+				+0.3
1,233,925	+				-0.5
1,233,925	+				-0.5
1,233,925	+				-0.3
1,233,926	-				+0.0
1,233,926	-				+1.5
1,234,121	+		PfGW456L13_1112	0.19	-0.0
1,234,121	+		PfGW456L13_1112	0.19	+0.4
1,234,122	-		PfGW456L13_1112	0.19	+0.3
1,234,298	+		PfGW456L13_1112	0.35	-1.6
1,234,298	+		PfGW456L13_1112	0.35	-1.7
1,234,299	-		PfGW456L13_1112	0.35	-1.0
1,234,318	+		PfGW456L13_1112	0.36	-0.0
1,234,352	+		PfGW456L13_1112	0.40	-0.8
1,234,353	-		PfGW456L13_1112	0.40	-0.4
1,234,384	+		PfGW456L13_1112	0.42	-1.3
1,234,385	-		PfGW456L13_1112	0.43	+0.4
1,234,418	+		PfGW456L13_1112	0.46	+0.3
1,234,418	+		PfGW456L13_1112	0.46	-1.0
1,234,419	-		PfGW456L13_1112	0.46	+0.6
1,234,601	+		PfGW456L13_1112	0.62	-0.2
1,234,601	+		PfGW456L13_1112	0.62	-0.1
1,234,601	+		PfGW456L13_1112	0.62	-0.2
1,234,601	+		PfGW456L13_1112	0.62	-0.5
1,234,601	+		PfGW456L13_1112	0.62	+0.7
1,234,601	+		PfGW456L13_1112	0.62	-0.6
1,234,601	+		PfGW456L13_1112	0.62	+0.0
1,234,601	+		PfGW456L13_1112	0.62	+0.6
1,234,601	+		PfGW456L13_1112	0.62	+0.0
1,234,601	+		PfGW456L13_1112	0.62	-0.3
1,234,601	+		PfGW456L13_1112	0.62	+0.7
1,234,601	+		PfGW456L13_1112	0.62	-0.4
1,234,602	-		PfGW456L13_1112	0.62	-0.3
1,234,602	-		PfGW456L13_1112	0.62	+0.3
1,234,602	-		PfGW456L13_1112	0.62	+1.3
1,234,602	-		PfGW456L13_1112	0.62	+0.4
1,234,602	-		PfGW456L13_1112	0.62	-1.1
1,234,602	-		PfGW456L13_1112	0.62	-0.5
1,234,602	-		PfGW456L13_1112	0.62	+1.2
1,234,602	-		PfGW456L13_1112	0.62	+0.8
1,234,602	-		PfGW456L13_1112	0.62	+0.2
1,234,602	-		PfGW456L13_1112	0.62	+1.2
1,234,603	+		PfGW456L13_1112	0.62	-0.6
1,234,603	+		PfGW456L13_1112	0.62	-1.3
1,234,603	+		PfGW456L13_1112	0.62	+1.0
1,234,603	+		PfGW456L13_1112	0.62	-0.2
1,234,604	-		PfGW456L13_1112	0.62	+0.4
1,234,604	-		PfGW456L13_1112	0.62	+1.6
1,234,604	-		PfGW456L13_1112	0.62	-0.3
1,234,604	-		PfGW456L13_1112	0.62	-0.1
1,234,604	-		PfGW456L13_1112	0.62	+0.7
1,234,604	-		PfGW456L13_1112	0.62	+1.3
1,234,604	-		PfGW456L13_1112	0.62	-0.1
1,234,604	-		PfGW456L13_1112	0.62	+1.4
1,234,604	-		PfGW456L13_1112	0.62	+0.7
1,234,604	-		PfGW456L13_1112	0.62	+0.1
1,234,604	-		PfGW456L13_1112	0.62	+0.2