Experiment: m.b. Choline Lysine 12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2265 and B158DRAFT_2266 are separated by 145 nucleotides B158DRAFT_2266 and B158DRAFT_2267 are separated by 97 nucleotides B158DRAFT_2267 and B158DRAFT_2268 are separated by 92 nucleotides
B158DRAFT_2265: B158DRAFT_2265 - tyrosine recombinase XerD, at 427,701 to 428,588
_2265
B158DRAFT_2266: B158DRAFT_2266 - Protein-disulfide isomerase, at 428,734 to 429,492
_2266
B158DRAFT_2267: B158DRAFT_2267 - Uncharacterized conserved protein, at 429,590 to 429,958
_2267
B158DRAFT_2268: B158DRAFT_2268 - single-stranded-DNA-specific exonuclease RecJ, at 430,051 to 431,778
_2268
Position (kb) 428
429
430 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 427.736 kb on + strand at 427.744 kb on - strand at 427.744 kb on - strand at 427.744 kb on - strand at 427.754 kb on - strand at 427.759 kb on - strand at 427.759 kb on - strand at 427.989 kb on - strand, within B158DRAFT_2265 at 428.053 kb on - strand, within B158DRAFT_2265 at 428.082 kb on + strand, within B158DRAFT_2265 at 428.138 kb on - strand, within B158DRAFT_2265 at 428.187 kb on + strand, within B158DRAFT_2265 at 428.187 kb on + strand, within B158DRAFT_2265 at 428.210 kb on + strand, within B158DRAFT_2265 at 428.218 kb on - strand, within B158DRAFT_2265 at 428.218 kb on - strand, within B158DRAFT_2265 at 428.232 kb on + strand, within B158DRAFT_2265 at 428.239 kb on - strand, within B158DRAFT_2265 at 428.262 kb on + strand, within B158DRAFT_2265 at 428.263 kb on - strand, within B158DRAFT_2265 at 428.265 kb on - strand, within B158DRAFT_2265 at 428.275 kb on - strand, within B158DRAFT_2265 at 428.277 kb on - strand, within B158DRAFT_2265 at 428.282 kb on - strand, within B158DRAFT_2265 at 428.289 kb on + strand, within B158DRAFT_2265 at 428.329 kb on + strand, within B158DRAFT_2265 at 428.352 kb on + strand, within B158DRAFT_2265 at 428.365 kb on - strand, within B158DRAFT_2265 at 428.418 kb on + strand, within B158DRAFT_2265 at 428.426 kb on - strand, within B158DRAFT_2265 at 428.453 kb on + strand, within B158DRAFT_2265 at 428.453 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.471 kb on + strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.479 kb on - strand, within B158DRAFT_2265 at 428.490 kb on - strand, within B158DRAFT_2265 at 428.522 kb on + strand at 428.522 kb on + strand at 428.522 kb on + strand at 428.522 kb on + strand at 428.522 kb on + strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.530 kb on - strand at 428.556 kb on + strand at 428.607 kb on + strand at 428.801 kb on - strand at 428.868 kb on + strand, within B158DRAFT_2266 at 428.889 kb on + strand, within B158DRAFT_2266 at 429.070 kb on + strand, within B158DRAFT_2266 at 429.234 kb on - strand, within B158DRAFT_2266 at 429.252 kb on + strand, within B158DRAFT_2266 at 429.267 kb on - strand, within B158DRAFT_2266 at 429.352 kb on + strand, within B158DRAFT_2266 at 429.469 kb on - strand at 429.479 kb on - strand at 429.505 kb on - strand at 429.516 kb on - strand at 429.535 kb on + strand at 429.538 kb on - strand at 429.594 kb on + strand at 429.594 kb on + strand at 429.596 kb on + strand at 429.597 kb on - strand at 429.600 kb on + strand at 429.602 kb on - strand at 429.607 kb on - strand at 429.613 kb on - strand at 429.618 kb on - strand at 429.639 kb on + strand, within B158DRAFT_2267 at 429.663 kb on - strand, within B158DRAFT_2267 at 429.671 kb on - strand, within B158DRAFT_2267 at 429.700 kb on - strand, within B158DRAFT_2267 at 429.733 kb on + strand, within B158DRAFT_2267 at 429.784 kb on + strand, within B158DRAFT_2267 at 429.784 kb on - strand, within B158DRAFT_2267 at 429.834 kb on + strand, within B158DRAFT_2267 at 429.924 kb on - strand at 429.935 kb on + strand at 429.936 kb on + strand at 429.936 kb on + strand at 429.944 kb on - strand at 429.944 kb on - strand at 429.944 kb on - strand at 429.944 kb on - strand at 429.974 kb on + strand at 429.974 kb on + strand at 429.974 kb on + strand at 429.982 kb on - strand at 429.982 kb on - strand at 429.982 kb on - strand at 429.982 kb on - strand at 429.982 kb on - strand at 429.982 kb on - strand at 430.099 kb on + strand at 430.103 kb on + strand at 430.133 kb on - strand at 430.133 kb on - strand at 430.133 kb on - strand at 430.142 kb on + strand at 430.142 kb on + strand at 430.142 kb on + strand at 430.150 kb on - strand at 430.150 kb on - strand at 430.150 kb on - strand at 430.159 kb on + strand at 430.219 kb on + strand at 430.389 kb on - strand, within B158DRAFT_2268 at 430.395 kb on - strand, within B158DRAFT_2268 at 430.422 kb on + strand, within B158DRAFT_2268 at 430.476 kb on + strand, within B158DRAFT_2268 at 430.476 kb on + strand, within B158DRAFT_2268 at 430.476 kb on + strand, within B158DRAFT_2268 at 430.484 kb on - strand, within B158DRAFT_2268
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline Lysine 12 mM remove 427,736 + -0.4 427,744 - -1.7 427,744 - -1.7 427,744 - -0.9 427,754 - -0.7 427,759 - -0.9 427,759 - -1.2 427,989 - B158DRAFT_2265 0.32 -0.6 428,053 - B158DRAFT_2265 0.40 -1.4 428,082 + B158DRAFT_2265 0.43 -2.2 428,138 - B158DRAFT_2265 0.49 -0.9 428,187 + B158DRAFT_2265 0.55 -1.0 428,187 + B158DRAFT_2265 0.55 -0.3 428,210 + B158DRAFT_2265 0.57 -0.7 428,218 - B158DRAFT_2265 0.58 -1.2 428,218 - B158DRAFT_2265 0.58 -0.6 428,232 + B158DRAFT_2265 0.60 -1.4 428,239 - B158DRAFT_2265 0.61 -2.0 428,262 + B158DRAFT_2265 0.63 -2.8 428,263 - B158DRAFT_2265 0.63 -1.7 428,265 - B158DRAFT_2265 0.64 +1.0 428,275 - B158DRAFT_2265 0.65 +0.1 428,277 - B158DRAFT_2265 0.65 -1.7 428,282 - B158DRAFT_2265 0.65 -1.3 428,289 + B158DRAFT_2265 0.66 -1.3 428,329 + B158DRAFT_2265 0.71 -0.2 428,352 + B158DRAFT_2265 0.73 -0.9 428,365 - B158DRAFT_2265 0.75 -0.6 428,418 + B158DRAFT_2265 0.81 -0.7 428,426 - B158DRAFT_2265 0.82 -1.0 428,453 + B158DRAFT_2265 0.85 -0.6 428,453 + B158DRAFT_2265 0.85 -0.7 428,471 + B158DRAFT_2265 0.87 -1.3 428,471 + B158DRAFT_2265 0.87 -1.4 428,471 + B158DRAFT_2265 0.87 -1.2 428,471 + B158DRAFT_2265 0.87 -1.6 428,471 + B158DRAFT_2265 0.87 -0.7 428,479 - B158DRAFT_2265 0.88 -0.8 428,479 - B158DRAFT_2265 0.88 -1.4 428,479 - B158DRAFT_2265 0.88 -1.2 428,479 - B158DRAFT_2265 0.88 -1.6 428,479 - B158DRAFT_2265 0.88 -0.7 428,490 - B158DRAFT_2265 0.89 -1.4 428,522 + -1.8 428,522 + -1.4 428,522 + -0.8 428,522 + -0.8 428,522 + -1.3 428,530 - -1.2 428,530 - -0.4 428,530 - -2.0 428,530 - -0.7 428,530 - -1.2 428,530 - -1.3 428,530 - -0.4 428,556 + -1.0 428,607 + -0.4 428,801 - -0.7 428,868 + B158DRAFT_2266 0.18 -0.2 428,889 + B158DRAFT_2266 0.20 -1.5 429,070 + B158DRAFT_2266 0.44 -0.7 429,234 - B158DRAFT_2266 0.66 +0.4 429,252 + B158DRAFT_2266 0.68 -1.0 429,267 - B158DRAFT_2266 0.70 -0.2 429,352 + B158DRAFT_2266 0.81 -1.2 429,469 - +0.3 429,479 - -0.7 429,505 - -0.4 429,516 - -0.6 429,535 + -0.2 429,538 - +0.1 429,594 + +0.1 429,594 + -0.1 429,596 + +0.2 429,597 - +0.3 429,600 + -0.5 429,602 - -0.3 429,607 - +0.0 429,613 - +0.4 429,618 - +0.7 429,639 + B158DRAFT_2267 0.13 -0.2 429,663 - B158DRAFT_2267 0.20 -0.5 429,671 - B158DRAFT_2267 0.22 +0.4 429,700 - B158DRAFT_2267 0.30 +0.2 429,733 + B158DRAFT_2267 0.39 -0.8 429,784 + B158DRAFT_2267 0.53 -0.1 429,784 - B158DRAFT_2267 0.53 +0.3 429,834 + B158DRAFT_2267 0.66 -0.2 429,924 - +0.1 429,935 + -0.0 429,936 + -0.1 429,936 + -0.2 429,944 - +0.3 429,944 - -0.3 429,944 - +1.1 429,944 - +0.1 429,974 + -0.1 429,974 + +0.6 429,974 + -0.3 429,982 - -0.3 429,982 - -0.1 429,982 - +0.1 429,982 - -0.4 429,982 - -0.5 429,982 - -0.5 430,099 + -0.9 430,103 + -1.4 430,133 - -2.7 430,133 - -2.6 430,133 - -1.9 430,142 + -1.8 430,142 + -1.9 430,142 + -2.4 430,150 - -2.4 430,150 - -1.2 430,150 - -1.9 430,159 + -0.9 430,219 + -2.8 430,389 - B158DRAFT_2268 0.20 -2.2 430,395 - B158DRAFT_2268 0.20 -2.3 430,422 + B158DRAFT_2268 0.21 -2.0 430,476 + B158DRAFT_2268 0.25 -2.1 430,476 + B158DRAFT_2268 0.25 -2.2 430,476 + B158DRAFT_2268 0.25 -2.5 430,484 - B158DRAFT_2268 0.25 -2.3
Or see this region's nucleotide sequence