Experiment: m.b. Choline Lysine 12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1290 and B158DRAFT_1291 are separated by 64 nucleotides B158DRAFT_1291 and B158DRAFT_1292 are separated by 47 nucleotides B158DRAFT_1292 and B158DRAFT_1293 are separated by 17 nucleotides B158DRAFT_1293 and B158DRAFT_1294 are separated by 93 nucleotides
B158DRAFT_1290: B158DRAFT_1290 - Predicted protease with the C-terminal PDZ domain, at 1,334,095 to 1,335,924
_1290
B158DRAFT_1291: B158DRAFT_1291 - exodeoxyribonuclease III, at 1,335,989 to 1,336,804
_1291
B158DRAFT_1292: B158DRAFT_1292 - hypothetical protein, at 1,336,852 to 1,340,016
_1292
B158DRAFT_1293: B158DRAFT_1293 - 6-pyruvoyl-tetrahydropterin synthase, at 1,340,034 to 1,340,885
_1293
B158DRAFT_1294: B158DRAFT_1294 - Sugar kinases, ribokinase family, at 1,340,979 to 1,341,986
_1294
Position (kb)
1336
1337
1338
1339
1340
1341 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1336.034 kb on + strand at 1336.042 kb on - strand at 1336.116 kb on + strand, within B158DRAFT_1291 at 1336.116 kb on + strand, within B158DRAFT_1291 at 1336.198 kb on + strand, within B158DRAFT_1291 at 1336.449 kb on + strand, within B158DRAFT_1291 at 1336.449 kb on + strand, within B158DRAFT_1291 at 1336.596 kb on - strand, within B158DRAFT_1291 at 1336.620 kb on + strand, within B158DRAFT_1291 at 1336.696 kb on - strand, within B158DRAFT_1291 at 1336.705 kb on + strand, within B158DRAFT_1291 at 1336.706 kb on - strand, within B158DRAFT_1291 at 1336.713 kb on - strand, within B158DRAFT_1291 at 1336.810 kb on + strand at 1336.880 kb on - strand at 1336.892 kb on - strand at 1337.000 kb on + strand at 1337.008 kb on - strand at 1337.093 kb on + strand at 1337.101 kb on - strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.141 kb on - strand at 1337.141 kb on - strand at 1337.228 kb on + strand, within B158DRAFT_1292 at 1337.231 kb on - strand, within B158DRAFT_1292 at 1337.231 kb on - strand, within B158DRAFT_1292 at 1337.510 kb on + strand, within B158DRAFT_1292 at 1337.518 kb on - strand, within B158DRAFT_1292 at 1337.544 kb on + strand, within B158DRAFT_1292 at 1337.601 kb on - strand, within B158DRAFT_1292 at 1337.603 kb on + strand, within B158DRAFT_1292 at 1337.685 kb on + strand, within B158DRAFT_1292 at 1337.716 kb on + strand, within B158DRAFT_1292 at 1337.853 kb on + strand, within B158DRAFT_1292 at 1337.893 kb on + strand, within B158DRAFT_1292 at 1337.900 kb on + strand, within B158DRAFT_1292 at 1337.956 kb on + strand, within B158DRAFT_1292 at 1337.964 kb on - strand, within B158DRAFT_1292 at 1337.964 kb on - strand, within B158DRAFT_1292 at 1337.964 kb on - strand, within B158DRAFT_1292 at 1337.964 kb on - strand, within B158DRAFT_1292 at 1337.984 kb on - strand, within B158DRAFT_1292 at 1338.354 kb on + strand, within B158DRAFT_1292 at 1338.362 kb on - strand, within B158DRAFT_1292 at 1338.575 kb on - strand, within B158DRAFT_1292 at 1338.607 kb on + strand, within B158DRAFT_1292 at 1338.628 kb on + strand, within B158DRAFT_1292 at 1338.664 kb on + strand, within B158DRAFT_1292 at 1338.664 kb on + strand, within B158DRAFT_1292 at 1338.672 kb on - strand, within B158DRAFT_1292 at 1338.684 kb on + strand, within B158DRAFT_1292 at 1338.855 kb on + strand, within B158DRAFT_1292 at 1338.863 kb on - strand, within B158DRAFT_1292 at 1338.886 kb on - strand, within B158DRAFT_1292 at 1339.080 kb on + strand, within B158DRAFT_1292 at 1339.094 kb on + strand, within B158DRAFT_1292 at 1339.098 kb on - strand, within B158DRAFT_1292 at 1339.229 kb on + strand, within B158DRAFT_1292 at 1339.229 kb on + strand, within B158DRAFT_1292 at 1339.235 kb on - strand, within B158DRAFT_1292 at 1339.248 kb on + strand, within B158DRAFT_1292 at 1339.256 kb on - strand, within B158DRAFT_1292 at 1339.293 kb on - strand, within B158DRAFT_1292 at 1339.328 kb on - strand, within B158DRAFT_1292 at 1339.450 kb on + strand, within B158DRAFT_1292 at 1339.450 kb on - strand, within B158DRAFT_1292 at 1339.477 kb on + strand, within B158DRAFT_1292 at 1339.486 kb on + strand, within B158DRAFT_1292 at 1339.494 kb on - strand, within B158DRAFT_1292 at 1339.523 kb on + strand, within B158DRAFT_1292 at 1339.533 kb on + strand, within B158DRAFT_1292 at 1339.743 kb on + strand at 1339.751 kb on - strand at 1339.751 kb on - strand at 1339.785 kb on - strand at 1339.793 kb on + strand at 1339.809 kb on + strand at 1339.851 kb on + strand at 1339.856 kb on + strand at 1339.867 kb on + strand at 1339.875 kb on - strand at 1339.895 kb on + strand at 1339.927 kb on + strand at 1339.932 kb on + strand at 1339.932 kb on + strand at 1339.940 kb on - strand at 1339.944 kb on + strand at 1340.032 kb on - strand at 1340.122 kb on + strand, within B158DRAFT_1293 at 1340.149 kb on + strand, within B158DRAFT_1293 at 1340.149 kb on + strand, within B158DRAFT_1293 at 1340.149 kb on + strand, within B158DRAFT_1293 at 1340.157 kb on - strand, within B158DRAFT_1293 at 1340.162 kb on - strand, within B158DRAFT_1293 at 1340.167 kb on - strand, within B158DRAFT_1293 at 1340.235 kb on + strand, within B158DRAFT_1293 at 1340.243 kb on - strand, within B158DRAFT_1293 at 1340.284 kb on - strand, within B158DRAFT_1293 at 1340.307 kb on - strand, within B158DRAFT_1293 at 1340.311 kb on + strand, within B158DRAFT_1293 at 1340.355 kb on + strand, within B158DRAFT_1293 at 1340.501 kb on + strand, within B158DRAFT_1293 at 1340.501 kb on + strand, within B158DRAFT_1293 at 1340.567 kb on + strand, within B158DRAFT_1293 at 1340.574 kb on + strand, within B158DRAFT_1293 at 1340.575 kb on - strand, within B158DRAFT_1293 at 1340.586 kb on + strand, within B158DRAFT_1293 at 1340.678 kb on - strand, within B158DRAFT_1293 at 1340.755 kb on + strand, within B158DRAFT_1293 at 1341.000 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline Lysine 12 mM remove 1,336,034 + +1.5 1,336,042 - +0.2 1,336,116 + B158DRAFT_1291 0.16 +0.5 1,336,116 + B158DRAFT_1291 0.16 -0.5 1,336,198 + B158DRAFT_1291 0.26 -1.9 1,336,449 + B158DRAFT_1291 0.56 -0.6 1,336,449 + B158DRAFT_1291 0.56 -0.5 1,336,596 - B158DRAFT_1291 0.74 -1.5 1,336,620 + B158DRAFT_1291 0.77 -0.5 1,336,696 - B158DRAFT_1291 0.87 -0.5 1,336,705 + B158DRAFT_1291 0.88 -2.0 1,336,706 - B158DRAFT_1291 0.88 -0.3 1,336,713 - B158DRAFT_1291 0.89 +2.5 1,336,810 + +0.1 1,336,880 - -0.5 1,336,892 - -0.3 1,337,000 + +0.1 1,337,008 - -1.0 1,337,093 + -0.0 1,337,101 - +0.2 1,337,133 + -0.5 1,337,133 + -0.1 1,337,133 + -0.1 1,337,133 + -0.1 1,337,133 + -0.3 1,337,141 - -0.2 1,337,141 - -0.9 1,337,228 + B158DRAFT_1292 0.12 -0.1 1,337,231 - B158DRAFT_1292 0.12 -0.1 1,337,231 - B158DRAFT_1292 0.12 +0.0 1,337,510 + B158DRAFT_1292 0.21 +0.5 1,337,518 - B158DRAFT_1292 0.21 +0.1 1,337,544 + B158DRAFT_1292 0.22 -0.5 1,337,601 - B158DRAFT_1292 0.24 +0.5 1,337,603 + B158DRAFT_1292 0.24 +0.1 1,337,685 + B158DRAFT_1292 0.26 -0.4 1,337,716 + B158DRAFT_1292 0.27 +0.1 1,337,853 + B158DRAFT_1292 0.32 +0.1 1,337,893 + B158DRAFT_1292 0.33 -0.1 1,337,900 + B158DRAFT_1292 0.33 +0.0 1,337,956 + B158DRAFT_1292 0.35 +0.4 1,337,964 - B158DRAFT_1292 0.35 -0.5 1,337,964 - B158DRAFT_1292 0.35 -0.0 1,337,964 - B158DRAFT_1292 0.35 -0.5 1,337,964 - B158DRAFT_1292 0.35 -0.4 1,337,984 - B158DRAFT_1292 0.36 -2.3 1,338,354 + B158DRAFT_1292 0.47 -0.7 1,338,362 - B158DRAFT_1292 0.48 -0.2 1,338,575 - B158DRAFT_1292 0.54 -0.5 1,338,607 + B158DRAFT_1292 0.55 -0.2 1,338,628 + B158DRAFT_1292 0.56 -0.4 1,338,664 + B158DRAFT_1292 0.57 -0.7 1,338,664 + B158DRAFT_1292 0.57 -0.6 1,338,672 - B158DRAFT_1292 0.58 -0.2 1,338,684 + B158DRAFT_1292 0.58 -0.0 1,338,855 + B158DRAFT_1292 0.63 +0.5 1,338,863 - B158DRAFT_1292 0.64 -0.4 1,338,886 - B158DRAFT_1292 0.64 +1.1 1,339,080 + B158DRAFT_1292 0.70 -0.7 1,339,094 + B158DRAFT_1292 0.71 -0.3 1,339,098 - B158DRAFT_1292 0.71 +0.4 1,339,229 + B158DRAFT_1292 0.75 -0.4 1,339,229 + B158DRAFT_1292 0.75 +0.0 1,339,235 - B158DRAFT_1292 0.75 -0.1 1,339,248 + B158DRAFT_1292 0.76 +0.0 1,339,256 - B158DRAFT_1292 0.76 +0.1 1,339,293 - B158DRAFT_1292 0.77 -1.0 1,339,328 - B158DRAFT_1292 0.78 -0.5 1,339,450 + B158DRAFT_1292 0.82 -2.5 1,339,450 - B158DRAFT_1292 0.82 -0.2 1,339,477 + B158DRAFT_1292 0.83 -0.2 1,339,486 + B158DRAFT_1292 0.83 +0.3 1,339,494 - B158DRAFT_1292 0.83 +0.2 1,339,523 + B158DRAFT_1292 0.84 -0.0 1,339,533 + B158DRAFT_1292 0.85 -0.2 1,339,743 + +0.0 1,339,751 - +0.2 1,339,751 - -1.0 1,339,785 - +0.3 1,339,793 + -0.3 1,339,809 + -0.3 1,339,851 + -0.1 1,339,856 + +0.7 1,339,867 + +0.5 1,339,875 - +0.2 1,339,895 + +0.1 1,339,927 + -0.3 1,339,932 + -0.0 1,339,932 + -0.1 1,339,940 - -0.2 1,339,944 + -0.1 1,340,032 - -0.1 1,340,122 + B158DRAFT_1293 0.10 -0.2 1,340,149 + B158DRAFT_1293 0.13 -0.2 1,340,149 + B158DRAFT_1293 0.13 -0.2 1,340,149 + B158DRAFT_1293 0.13 -0.3 1,340,157 - B158DRAFT_1293 0.14 -0.4 1,340,162 - B158DRAFT_1293 0.15 -0.4 1,340,167 - B158DRAFT_1293 0.16 -0.3 1,340,235 + B158DRAFT_1293 0.24 -0.2 1,340,243 - B158DRAFT_1293 0.25 +0.3 1,340,284 - B158DRAFT_1293 0.29 -0.5 1,340,307 - B158DRAFT_1293 0.32 -0.0 1,340,311 + B158DRAFT_1293 0.33 -0.1 1,340,355 + B158DRAFT_1293 0.38 -0.7 1,340,501 + B158DRAFT_1293 0.55 -0.3 1,340,501 + B158DRAFT_1293 0.55 +0.2 1,340,567 + B158DRAFT_1293 0.63 -0.4 1,340,574 + B158DRAFT_1293 0.63 -0.6 1,340,575 - B158DRAFT_1293 0.63 -0.5 1,340,586 + B158DRAFT_1293 0.65 -0.5 1,340,678 - B158DRAFT_1293 0.76 -1.5 1,340,755 + B158DRAFT_1293 0.85 -0.2 1,341,000 + -0.4
Or see this region's nucleotide sequence