Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0927

Experiment: m.b. Choline Lysine 12 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0926 and B158DRAFT_0927 are separated by 3 nucleotidesB158DRAFT_0927 and B158DRAFT_0928 are separated by 10 nucleotides B158DRAFT_0926: B158DRAFT_0926 - hypothetical protein, at 954,335 to 955,486 _0926 B158DRAFT_0927: B158DRAFT_0927 - VCBS repeat, at 955,490 to 956,023 _0927 B158DRAFT_0928: B158DRAFT_0928 - hypothetical protein, at 956,034 to 957,629 _0928 Position (kb) 955 956 957Strain fitness (log2 ratio) -1 0 1at 954.582 kb on + strand, within B158DRAFT_0926at 954.590 kb on - strand, within B158DRAFT_0926at 954.656 kb on + strand, within B158DRAFT_0926at 954.691 kb on - strand, within B158DRAFT_0926at 954.807 kb on - strand, within B158DRAFT_0926at 954.989 kb on + strand, within B158DRAFT_0926at 954.997 kb on - strand, within B158DRAFT_0926at 955.201 kb on - strand, within B158DRAFT_0926at 955.215 kb on - strand, within B158DRAFT_0926at 955.217 kb on + strand, within B158DRAFT_0926at 955.305 kb on - strand, within B158DRAFT_0926at 955.437 kb on - strandat 955.633 kb on + strand, within B158DRAFT_0927at 955.641 kb on - strand, within B158DRAFT_0927at 955.666 kb on + strand, within B158DRAFT_0927at 955.674 kb on - strand, within B158DRAFT_0927at 955.708 kb on + strand, within B158DRAFT_0927at 955.727 kb on - strand, within B158DRAFT_0927at 955.727 kb on - strand, within B158DRAFT_0927at 955.841 kb on - strand, within B158DRAFT_0927at 955.841 kb on - strand, within B158DRAFT_0927at 955.867 kb on + strand, within B158DRAFT_0927at 955.898 kb on - strand, within B158DRAFT_0927at 955.926 kb on + strand, within B158DRAFT_0927at 955.966 kb on - strand, within B158DRAFT_0927at 955.983 kb on + strandat 956.018 kb on + strandat 956.123 kb on + strandat 956.123 kb on + strandat 956.216 kb on - strand, within B158DRAFT_0928at 956.280 kb on - strand, within B158DRAFT_0928at 956.295 kb on + strand, within B158DRAFT_0928at 956.296 kb on - strand, within B158DRAFT_0928at 956.371 kb on - strand, within B158DRAFT_0928at 956.405 kb on + strand, within B158DRAFT_0928at 956.413 kb on - strand, within B158DRAFT_0928at 956.510 kb on + strand, within B158DRAFT_0928at 956.518 kb on - strand, within B158DRAFT_0928at 956.518 kb on - strand, within B158DRAFT_0928at 956.592 kb on + strand, within B158DRAFT_0928at 956.627 kb on - strand, within B158DRAFT_0928at 956.628 kb on + strand, within B158DRAFT_0928at 956.629 kb on - strand, within B158DRAFT_0928at 956.629 kb on - strand, within B158DRAFT_0928at 956.728 kb on + strand, within B158DRAFT_0928at 956.858 kb on - strand, within B158DRAFT_0928at 956.941 kb on - strand, within B158DRAFT_0928at 956.941 kb on - strand, within B158DRAFT_0928at 956.976 kb on + strand, within B158DRAFT_0928at 956.984 kb on - strand, within B158DRAFT_0928

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline Lysine 12 mM
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954,582 + B158DRAFT_0926 0.21 -0.4
954,590 - B158DRAFT_0926 0.22 -0.5
954,656 + B158DRAFT_0926 0.28 -0.3
954,691 - B158DRAFT_0926 0.31 +0.0
954,807 - B158DRAFT_0926 0.41 -0.5
954,989 + B158DRAFT_0926 0.57 -0.2
954,997 - B158DRAFT_0926 0.57 -0.2
955,201 - B158DRAFT_0926 0.75 +0.4
955,215 - B158DRAFT_0926 0.76 -0.4
955,217 + B158DRAFT_0926 0.77 -0.3
955,305 - B158DRAFT_0926 0.84 -0.2
955,437 - -0.1
955,633 + B158DRAFT_0927 0.27 +0.2
955,641 - B158DRAFT_0927 0.28 +0.2
955,666 + B158DRAFT_0927 0.33 -0.3
955,674 - B158DRAFT_0927 0.34 +0.4
955,708 + B158DRAFT_0927 0.41 +0.3
955,727 - B158DRAFT_0927 0.44 -0.2
955,727 - B158DRAFT_0927 0.44 -0.2
955,841 - B158DRAFT_0927 0.66 +0.4
955,841 - B158DRAFT_0927 0.66 +0.4
955,867 + B158DRAFT_0927 0.71 +0.2
955,898 - B158DRAFT_0927 0.76 -0.1
955,926 + B158DRAFT_0927 0.82 +0.2
955,966 - B158DRAFT_0927 0.89 +0.0
955,983 + -0.3
956,018 + +0.6
956,123 + +0.4
956,123 + +0.5
956,216 - B158DRAFT_0928 0.11 +0.1
956,280 - B158DRAFT_0928 0.15 -0.0
956,295 + B158DRAFT_0928 0.16 -0.2
956,296 - B158DRAFT_0928 0.16 +0.6
956,371 - B158DRAFT_0928 0.21 -0.2
956,405 + B158DRAFT_0928 0.23 -0.3
956,413 - B158DRAFT_0928 0.24 -0.3
956,510 + B158DRAFT_0928 0.30 +0.9
956,518 - B158DRAFT_0928 0.30 -0.7
956,518 - B158DRAFT_0928 0.30 +0.4
956,592 + B158DRAFT_0928 0.35 -0.1
956,627 - B158DRAFT_0928 0.37 +0.1
956,628 + B158DRAFT_0928 0.37 -0.3
956,629 - B158DRAFT_0928 0.37 -0.0
956,629 - B158DRAFT_0928 0.37 -1.1
956,728 + B158DRAFT_0928 0.43 -0.2
956,858 - B158DRAFT_0928 0.52 +0.0
956,941 - B158DRAFT_0928 0.57 -0.2
956,941 - B158DRAFT_0928 0.57 +0.2
956,976 + B158DRAFT_0928 0.59 -0.1
956,984 - B158DRAFT_0928 0.60 +0.1

Or see this region's nucleotide sequence