Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0197

Experiment: m.b. Choline Lysine 12 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0195 and B158DRAFT_0196 are separated by 38 nucleotidesB158DRAFT_0196 and B158DRAFT_0197 are separated by 127 nucleotidesB158DRAFT_0197 and B158DRAFT_0198 are separated by 22 nucleotidesB158DRAFT_0198 and B158DRAFT_0199 are separated by 146 nucleotides B158DRAFT_0195: B158DRAFT_0195 - pilus retraction protein PilT, at 201,205 to 202,239 _0195 B158DRAFT_0196: B158DRAFT_0196 - pyridoxal phosphate enzyme, YggS family, at 202,278 to 202,961 _0196 B158DRAFT_0197: B158DRAFT_0197 - pyrroline-5-carboxylate reductase, at 203,089 to 203,946 _0197 B158DRAFT_0198: B158DRAFT_0198 - Predicted integral membrane protein, at 203,969 to 204,556 _0198 B158DRAFT_0199: B158DRAFT_0199 - hypothetical protein, at 204,703 to 205,152 _0199 Position (kb) 203 204Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 202.094 kb on - strand, within B158DRAFT_0195at 202.096 kb on + strand, within B158DRAFT_0195at 202.196 kb on + strandat 202.211 kb on - strandat 202.299 kb on - strandat 202.411 kb on - strand, within B158DRAFT_0196at 202.411 kb on - strand, within B158DRAFT_0196at 202.521 kb on + strand, within B158DRAFT_0196at 202.521 kb on + strand, within B158DRAFT_0196at 202.529 kb on - strand, within B158DRAFT_0196at 202.529 kb on - strand, within B158DRAFT_0196at 202.537 kb on - strand, within B158DRAFT_0196at 202.542 kb on - strand, within B158DRAFT_0196at 202.581 kb on - strand, within B158DRAFT_0196at 202.581 kb on - strand, within B158DRAFT_0196at 202.581 kb on - strand, within B158DRAFT_0196at 202.591 kb on - strand, within B158DRAFT_0196at 202.618 kb on - strand, within B158DRAFT_0196at 202.632 kb on + strand, within B158DRAFT_0196at 202.640 kb on - strand, within B158DRAFT_0196at 202.640 kb on - strand, within B158DRAFT_0196at 202.640 kb on - strand, within B158DRAFT_0196at 202.651 kb on + strand, within B158DRAFT_0196at 202.652 kb on + strand, within B158DRAFT_0196at 202.669 kb on - strand, within B158DRAFT_0196at 202.690 kb on + strand, within B158DRAFT_0196at 202.707 kb on + strand, within B158DRAFT_0196at 202.707 kb on + strand, within B158DRAFT_0196at 202.753 kb on + strand, within B158DRAFT_0196at 202.761 kb on - strand, within B158DRAFT_0196at 202.762 kb on - strand, within B158DRAFT_0196at 202.768 kb on + strand, within B158DRAFT_0196at 202.776 kb on - strand, within B158DRAFT_0196at 202.776 kb on - strand, within B158DRAFT_0196at 202.856 kb on + strand, within B158DRAFT_0196at 202.864 kb on - strand, within B158DRAFT_0196at 202.888 kb on + strand, within B158DRAFT_0196at 202.896 kb on - strandat 202.896 kb on - strandat 202.896 kb on - strandat 202.927 kb on + strandat 202.936 kb on - strandat 202.936 kb on - strandat 202.936 kb on - strandat 202.994 kb on + strandat 202.994 kb on + strandat 202.994 kb on + strandat 202.994 kb on + strandat 203.002 kb on - strandat 203.013 kb on - strandat 203.018 kb on - strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.020 kb on + strandat 203.028 kb on - strandat 203.028 kb on - strandat 203.028 kb on - strandat 203.028 kb on - strandat 203.051 kb on + strandat 203.061 kb on + strandat 203.175 kb on + strand, within B158DRAFT_0197at 203.178 kb on - strand, within B158DRAFT_0197at 203.178 kb on - strand, within B158DRAFT_0197at 203.179 kb on - strand, within B158DRAFT_0197at 203.180 kb on + strand, within B158DRAFT_0197at 203.183 kb on - strand, within B158DRAFT_0197at 203.183 kb on - strand, within B158DRAFT_0197at 203.185 kb on + strand, within B158DRAFT_0197at 203.188 kb on - strand, within B158DRAFT_0197at 203.188 kb on - strand, within B158DRAFT_0197at 203.193 kb on - strand, within B158DRAFT_0197at 203.211 kb on + strand, within B158DRAFT_0197at 203.216 kb on + strand, within B158DRAFT_0197at 203.224 kb on - strand, within B158DRAFT_0197at 203.234 kb on - strand, within B158DRAFT_0197at 203.234 kb on - strand, within B158DRAFT_0197at 203.255 kb on + strand, within B158DRAFT_0197at 203.255 kb on + strand, within B158DRAFT_0197at 203.255 kb on + strand, within B158DRAFT_0197at 203.255 kb on + strand, within B158DRAFT_0197at 203.263 kb on - strand, within B158DRAFT_0197at 203.263 kb on - strand, within B158DRAFT_0197at 203.263 kb on - strand, within B158DRAFT_0197at 203.263 kb on - strand, within B158DRAFT_0197at 203.263 kb on - strand, within B158DRAFT_0197at 203.263 kb on - strand, within B158DRAFT_0197at 203.268 kb on - strand, within B158DRAFT_0197at 203.278 kb on + strand, within B158DRAFT_0197at 203.344 kb on - strand, within B158DRAFT_0197at 203.349 kb on + strand, within B158DRAFT_0197at 203.357 kb on - strand, within B158DRAFT_0197at 203.412 kb on - strand, within B158DRAFT_0197at 203.422 kb on + strand, within B158DRAFT_0197at 203.422 kb on + strand, within B158DRAFT_0197at 203.430 kb on - strand, within B158DRAFT_0197at 203.506 kb on - strand, within B158DRAFT_0197at 203.571 kb on + strand, within B158DRAFT_0197at 203.571 kb on + strand, within B158DRAFT_0197at 203.571 kb on + strand, within B158DRAFT_0197at 203.571 kb on + strand, within B158DRAFT_0197at 203.573 kb on + strand, within B158DRAFT_0197at 203.573 kb on + strand, within B158DRAFT_0197at 203.579 kb on - strand, within B158DRAFT_0197at 203.623 kb on - strand, within B158DRAFT_0197at 203.644 kb on - strand, within B158DRAFT_0197at 203.649 kb on - strand, within B158DRAFT_0197at 203.694 kb on - strand, within B158DRAFT_0197at 203.736 kb on + strand, within B158DRAFT_0197at 203.741 kb on + strand, within B158DRAFT_0197at 203.749 kb on + strand, within B158DRAFT_0197at 203.754 kb on - strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.755 kb on + strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.763 kb on - strand, within B158DRAFT_0197at 203.768 kb on - strand, within B158DRAFT_0197at 203.768 kb on - strand, within B158DRAFT_0197at 203.768 kb on - strand, within B158DRAFT_0197at 203.807 kb on + strand, within B158DRAFT_0197at 203.814 kb on + strand, within B158DRAFT_0197at 203.814 kb on + strand, within B158DRAFT_0197at 203.822 kb on - strand, within B158DRAFT_0197at 203.880 kb on + strandat 203.888 kb on + strandat 203.888 kb on - strandat 203.888 kb on - strandat 204.052 kb on - strand, within B158DRAFT_0198at 204.161 kb on + strand, within B158DRAFT_0198at 204.179 kb on + strand, within B158DRAFT_0198at 204.182 kb on - strand, within B158DRAFT_0198at 204.223 kb on + strand, within B158DRAFT_0198at 204.290 kb on - strand, within B158DRAFT_0198at 204.304 kb on + strand, within B158DRAFT_0198at 204.379 kb on + strand, within B158DRAFT_0198at 204.384 kb on + strand, within B158DRAFT_0198at 204.389 kb on + strand, within B158DRAFT_0198at 204.529 kb on - strandat 204.529 kb on - strandat 204.618 kb on - strandat 204.640 kb on + strandat 204.642 kb on - strandat 204.713 kb on - strandat 204.730 kb on - strandat 204.759 kb on + strand, within B158DRAFT_0199at 204.759 kb on + strand, within B158DRAFT_0199at 204.825 kb on - strand, within B158DRAFT_0199

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline Lysine 12 mM
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202,094 - B158DRAFT_0195 0.86 +0.6
202,096 + B158DRAFT_0195 0.86 +0.4
202,196 + +0.8
202,211 - -0.1
202,299 - -0.3
202,411 - B158DRAFT_0196 0.19 -0.4
202,411 - B158DRAFT_0196 0.19 +0.1
202,521 + B158DRAFT_0196 0.36 +0.7
202,521 + B158DRAFT_0196 0.36 -0.8
202,529 - B158DRAFT_0196 0.37 -0.3
202,529 - B158DRAFT_0196 0.37 -0.3
202,537 - B158DRAFT_0196 0.38 +0.1
202,542 - B158DRAFT_0196 0.39 +0.2
202,581 - B158DRAFT_0196 0.44 +0.2
202,581 - B158DRAFT_0196 0.44 +0.1
202,581 - B158DRAFT_0196 0.44 +0.0
202,591 - B158DRAFT_0196 0.46 -0.1
202,618 - B158DRAFT_0196 0.50 -0.1
202,632 + B158DRAFT_0196 0.52 +0.1
202,640 - B158DRAFT_0196 0.53 -0.1
202,640 - B158DRAFT_0196 0.53 +0.2
202,640 - B158DRAFT_0196 0.53 -0.1
202,651 + B158DRAFT_0196 0.55 -0.3
202,652 + B158DRAFT_0196 0.55 -0.3
202,669 - B158DRAFT_0196 0.57 -0.0
202,690 + B158DRAFT_0196 0.60 +0.2
202,707 + B158DRAFT_0196 0.63 -0.2
202,707 + B158DRAFT_0196 0.63 -0.1
202,753 + B158DRAFT_0196 0.69 +0.3
202,761 - B158DRAFT_0196 0.71 +0.4
202,762 - B158DRAFT_0196 0.71 -0.2
202,768 + B158DRAFT_0196 0.72 -0.2
202,776 - B158DRAFT_0196 0.73 -0.1
202,776 - B158DRAFT_0196 0.73 -0.3
202,856 + B158DRAFT_0196 0.85 +0.2
202,864 - B158DRAFT_0196 0.86 -0.3
202,888 + B158DRAFT_0196 0.89 -0.1
202,896 - -0.6
202,896 - +0.6
202,896 - +0.1
202,927 + -0.2
202,936 - -0.6
202,936 - -0.3
202,936 - -0.3
202,994 + +0.6
202,994 + -0.6
202,994 + -0.2
202,994 + -0.2
203,002 - -0.8
203,013 - -0.0
203,018 - -0.1
203,020 + -0.5
203,020 + -0.4
203,020 + -0.0
203,020 + -0.0
203,020 + -0.0
203,020 + +0.0
203,020 + -0.1
203,020 + -0.3
203,020 + -1.4
203,020 + -0.2
203,020 + +0.2
203,020 + +0.0
203,020 + -0.5
203,020 + -0.2
203,028 - +2.5
203,028 - +0.2
203,028 - -1.5
203,028 - -0.5
203,051 + -0.2
203,061 + -0.2
203,175 + B158DRAFT_0197 0.10 +0.5
203,178 - B158DRAFT_0197 0.10 +1.5
203,178 - B158DRAFT_0197 0.10 -1.8
203,179 - B158DRAFT_0197 0.10 +0.9
203,180 + B158DRAFT_0197 0.11 -0.7
203,183 - B158DRAFT_0197 0.11 -1.4
203,183 - B158DRAFT_0197 0.11 -0.7
203,185 + B158DRAFT_0197 0.11 +0.9
203,188 - B158DRAFT_0197 0.12 -1.8
203,188 - B158DRAFT_0197 0.12 -0.1
203,193 - B158DRAFT_0197 0.12 -0.5
203,211 + B158DRAFT_0197 0.14 -0.5
203,216 + B158DRAFT_0197 0.15 -1.8
203,224 - B158DRAFT_0197 0.16 +0.2
203,234 - B158DRAFT_0197 0.17 -0.3
203,234 - B158DRAFT_0197 0.17 +0.5
203,255 + B158DRAFT_0197 0.19 +0.2
203,255 + B158DRAFT_0197 0.19 +0.9
203,255 + B158DRAFT_0197 0.19 -0.8
203,255 + B158DRAFT_0197 0.19 -2.8
203,263 - B158DRAFT_0197 0.20 +2.5
203,263 - B158DRAFT_0197 0.20 +0.9
203,263 - B158DRAFT_0197 0.20 +0.9
203,263 - B158DRAFT_0197 0.20 +0.9
203,263 - B158DRAFT_0197 0.20 +0.5
203,263 - B158DRAFT_0197 0.20 +1.5
203,268 - B158DRAFT_0197 0.21 +2.5
203,278 + B158DRAFT_0197 0.22 -0.8
203,344 - B158DRAFT_0197 0.30 +0.9
203,349 + B158DRAFT_0197 0.30 -0.5
203,357 - B158DRAFT_0197 0.31 +0.9
203,412 - B158DRAFT_0197 0.38 -0.3
203,422 + B158DRAFT_0197 0.39 -1.6
203,422 + B158DRAFT_0197 0.39 -0.5
203,430 - B158DRAFT_0197 0.40 +1.5
203,506 - B158DRAFT_0197 0.49 +0.2
203,571 + B158DRAFT_0197 0.56 -2.3
203,571 + B158DRAFT_0197 0.56 +0.9
203,571 + B158DRAFT_0197 0.56 +0.5
203,571 + B158DRAFT_0197 0.56 -1.2
203,573 + B158DRAFT_0197 0.56 -1.0
203,573 + B158DRAFT_0197 0.56 -1.0
203,579 - B158DRAFT_0197 0.57 +0.9
203,623 - B158DRAFT_0197 0.62 -2.4
203,644 - B158DRAFT_0197 0.65 +1.5
203,649 - B158DRAFT_0197 0.65 +0.9
203,694 - B158DRAFT_0197 0.71 +0.9
203,736 + B158DRAFT_0197 0.75 -2.0
203,741 + B158DRAFT_0197 0.76 -0.8
203,749 + B158DRAFT_0197 0.77 +0.2
203,754 - B158DRAFT_0197 0.78 +0.5
203,755 + B158DRAFT_0197 0.78 +0.5
203,755 + B158DRAFT_0197 0.78 -0.1
203,755 + B158DRAFT_0197 0.78 +0.9
203,755 + B158DRAFT_0197 0.78 -0.1
203,755 + B158DRAFT_0197 0.78 -3.6
203,755 + B158DRAFT_0197 0.78 -0.7
203,755 + B158DRAFT_0197 0.78 +0.5
203,755 + B158DRAFT_0197 0.78 +1.5
203,755 + B158DRAFT_0197 0.78 -0.1
203,755 + B158DRAFT_0197 0.78 -0.1
203,763 - B158DRAFT_0197 0.79 +0.9
203,763 - B158DRAFT_0197 0.79 +1.5
203,763 - B158DRAFT_0197 0.79 -2.4
203,763 - B158DRAFT_0197 0.79 +2.5
203,763 - B158DRAFT_0197 0.79 -0.5
203,763 - B158DRAFT_0197 0.79 -0.3
203,763 - B158DRAFT_0197 0.79 +0.2
203,763 - B158DRAFT_0197 0.79 +1.5
203,763 - B158DRAFT_0197 0.79 +0.5
203,763 - B158DRAFT_0197 0.79 -0.1
203,763 - B158DRAFT_0197 0.79 -1.6
203,763 - B158DRAFT_0197 0.79 -1.0
203,768 - B158DRAFT_0197 0.79 +0.9
203,768 - B158DRAFT_0197 0.79 -0.1
203,768 - B158DRAFT_0197 0.79 -1.0
203,807 + B158DRAFT_0197 0.84 -0.3
203,814 + B158DRAFT_0197 0.84 -1.0
203,814 + B158DRAFT_0197 0.84 -0.5
203,822 - B158DRAFT_0197 0.85 -2.1
203,880 + -1.8
203,888 + -2.8
203,888 - +0.2
203,888 - +1.5
204,052 - B158DRAFT_0198 0.14 -0.7
204,161 + B158DRAFT_0198 0.33 +0.5
204,179 + B158DRAFT_0198 0.36 +0.1
204,182 - B158DRAFT_0198 0.36 -0.2
204,223 + B158DRAFT_0198 0.43 -0.5
204,290 - B158DRAFT_0198 0.55 -0.2
204,304 + B158DRAFT_0198 0.57 -0.2
204,379 + B158DRAFT_0198 0.70 +0.3
204,384 + B158DRAFT_0198 0.71 -0.1
204,389 + B158DRAFT_0198 0.71 +0.2
204,529 - -0.0
204,529 - +0.2
204,618 - +0.1
204,640 + -0.6
204,642 - +0.3
204,713 - -0.3
204,730 - -0.3
204,759 + B158DRAFT_0199 0.12 -0.3
204,759 + B158DRAFT_0199 0.12 +0.1
204,825 - B158DRAFT_0199 0.27 -0.1

Or see this region's nucleotide sequence