Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0152

Experiment: m.b. Choline Lysine 12 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0151 and B158DRAFT_0152 are separated by 14 nucleotidesB158DRAFT_0152 and B158DRAFT_0153 are separated by 149 nucleotides B158DRAFT_0151: B158DRAFT_0151 - Protein of unknown function (DUF3570)., at 147,650 to 148,954 _0151 B158DRAFT_0152: B158DRAFT_0152 - Membrane-associated lipoprotein involved in thiamine biosynthesis, at 148,969 to 149,874 _0152 B158DRAFT_0153: B158DRAFT_0153 - Thiol:disulfide interchange protein, at 150,024 to 151,949 _0153 Position (kb) 148 149 150Strain fitness (log2 ratio) -3 -2 -1 0 1at 148.012 kb on - strand, within B158DRAFT_0151at 148.040 kb on + strand, within B158DRAFT_0151at 148.054 kb on - strand, within B158DRAFT_0151at 148.071 kb on - strand, within B158DRAFT_0151at 148.084 kb on + strand, within B158DRAFT_0151at 148.084 kb on + strand, within B158DRAFT_0151at 148.084 kb on + strand, within B158DRAFT_0151at 148.084 kb on + strand, within B158DRAFT_0151at 148.118 kb on + strand, within B158DRAFT_0151at 148.118 kb on + strand, within B158DRAFT_0151at 148.126 kb on - strand, within B158DRAFT_0151at 148.126 kb on - strand, within B158DRAFT_0151at 148.126 kb on - strand, within B158DRAFT_0151at 148.126 kb on - strand, within B158DRAFT_0151at 148.136 kb on - strand, within B158DRAFT_0151at 148.174 kb on + strand, within B158DRAFT_0151at 148.182 kb on - strand, within B158DRAFT_0151at 148.182 kb on - strand, within B158DRAFT_0151at 148.196 kb on + strand, within B158DRAFT_0151at 148.196 kb on + strand, within B158DRAFT_0151at 148.196 kb on + strand, within B158DRAFT_0151at 148.196 kb on + strand, within B158DRAFT_0151at 148.196 kb on + strand, within B158DRAFT_0151at 148.201 kb on + strand, within B158DRAFT_0151at 148.201 kb on + strand, within B158DRAFT_0151at 148.201 kb on + strand, within B158DRAFT_0151at 148.201 kb on + strand, within B158DRAFT_0151at 148.204 kb on - strand, within B158DRAFT_0151at 148.204 kb on - strand, within B158DRAFT_0151at 148.204 kb on - strand, within B158DRAFT_0151at 148.209 kb on - strand, within B158DRAFT_0151at 148.209 kb on - strand, within B158DRAFT_0151at 148.209 kb on - strand, within B158DRAFT_0151at 148.209 kb on - strand, within B158DRAFT_0151at 148.209 kb on - strand, within B158DRAFT_0151at 148.228 kb on + strand, within B158DRAFT_0151at 148.258 kb on + strand, within B158DRAFT_0151at 148.318 kb on + strand, within B158DRAFT_0151at 148.332 kb on + strand, within B158DRAFT_0151at 148.340 kb on - strand, within B158DRAFT_0151at 148.340 kb on - strand, within B158DRAFT_0151at 148.340 kb on - strand, within B158DRAFT_0151at 148.421 kb on + strand, within B158DRAFT_0151at 148.531 kb on - strand, within B158DRAFT_0151at 148.542 kb on - strand, within B158DRAFT_0151at 148.568 kb on - strand, within B158DRAFT_0151at 148.635 kb on - strand, within B158DRAFT_0151at 148.664 kb on - strand, within B158DRAFT_0151at 148.708 kb on + strand, within B158DRAFT_0151at 148.723 kb on + strand, within B158DRAFT_0151at 148.723 kb on + strand, within B158DRAFT_0151at 148.791 kb on + strand, within B158DRAFT_0151at 148.799 kb on - strand, within B158DRAFT_0151at 148.799 kb on - strand, within B158DRAFT_0151at 148.839 kb on - strandat 148.846 kb on - strandat 148.849 kb on + strandat 148.925 kb on - strandat 149.036 kb on - strandat 149.121 kb on - strand, within B158DRAFT_0152at 149.121 kb on - strand, within B158DRAFT_0152at 149.196 kb on - strand, within B158DRAFT_0152at 149.198 kb on + strand, within B158DRAFT_0152at 149.206 kb on - strand, within B158DRAFT_0152at 149.206 kb on - strand, within B158DRAFT_0152at 149.206 kb on - strand, within B158DRAFT_0152at 149.206 kb on - strand, within B158DRAFT_0152at 149.240 kb on - strand, within B158DRAFT_0152at 149.240 kb on - strand, within B158DRAFT_0152at 149.245 kb on - strand, within B158DRAFT_0152at 149.249 kb on + strand, within B158DRAFT_0152at 149.257 kb on - strand, within B158DRAFT_0152at 149.257 kb on - strand, within B158DRAFT_0152at 149.282 kb on + strand, within B158DRAFT_0152at 149.282 kb on + strand, within B158DRAFT_0152at 149.282 kb on + strand, within B158DRAFT_0152at 149.282 kb on + strand, within B158DRAFT_0152at 149.282 kb on + strand, within B158DRAFT_0152at 149.282 kb on + strand, within B158DRAFT_0152at 149.282 kb on + strand, within B158DRAFT_0152at 149.290 kb on - strand, within B158DRAFT_0152at 149.290 kb on - strand, within B158DRAFT_0152at 149.290 kb on - strand, within B158DRAFT_0152at 149.321 kb on + strand, within B158DRAFT_0152at 149.321 kb on + strand, within B158DRAFT_0152at 149.330 kb on + strand, within B158DRAFT_0152at 149.330 kb on + strand, within B158DRAFT_0152at 149.338 kb on - strand, within B158DRAFT_0152at 149.388 kb on - strand, within B158DRAFT_0152at 149.395 kb on + strand, within B158DRAFT_0152at 149.545 kb on + strand, within B158DRAFT_0152at 149.603 kb on + strand, within B158DRAFT_0152at 149.613 kb on + strand, within B158DRAFT_0152at 149.624 kb on + strand, within B158DRAFT_0152at 149.632 kb on - strand, within B158DRAFT_0152at 149.641 kb on + strand, within B158DRAFT_0152at 149.649 kb on - strand, within B158DRAFT_0152at 149.689 kb on + strand, within B158DRAFT_0152at 149.689 kb on + strand, within B158DRAFT_0152at 149.689 kb on + strand, within B158DRAFT_0152at 149.689 kb on + strand, within B158DRAFT_0152at 149.697 kb on - strand, within B158DRAFT_0152at 149.697 kb on - strand, within B158DRAFT_0152at 149.697 kb on - strand, within B158DRAFT_0152at 149.697 kb on - strand, within B158DRAFT_0152at 149.697 kb on - strand, within B158DRAFT_0152at 149.763 kb on - strand, within B158DRAFT_0152at 149.763 kb on - strand, within B158DRAFT_0152at 149.795 kb on - strandat 149.811 kb on + strandat 149.811 kb on + strandat 149.811 kb on + strandat 149.811 kb on + strandat 149.811 kb on + strandat 149.819 kb on - strandat 149.846 kb on + strandat 149.958 kb on + strandat 150.161 kb on + strandat 150.600 kb on + strand, within B158DRAFT_0153at 150.735 kb on + strand, within B158DRAFT_0153at 150.776 kb on + strand, within B158DRAFT_0153

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline Lysine 12 mM
remove
148,012 - B158DRAFT_0151 0.28 -0.2
148,040 + B158DRAFT_0151 0.30 -0.2
148,054 - B158DRAFT_0151 0.31 -0.0
148,071 - B158DRAFT_0151 0.32 +0.1
148,084 + B158DRAFT_0151 0.33 -0.4
148,084 + B158DRAFT_0151 0.33 -0.2
148,084 + B158DRAFT_0151 0.33 +1.4
148,084 + B158DRAFT_0151 0.33 +0.1
148,118 + B158DRAFT_0151 0.36 -0.2
148,118 + B158DRAFT_0151 0.36 +0.5
148,126 - B158DRAFT_0151 0.36 -0.0
148,126 - B158DRAFT_0151 0.36 +0.0
148,126 - B158DRAFT_0151 0.36 -0.3
148,126 - B158DRAFT_0151 0.36 +0.0
148,136 - B158DRAFT_0151 0.37 -0.3
148,174 + B158DRAFT_0151 0.40 -0.0
148,182 - B158DRAFT_0151 0.41 +0.2
148,182 - B158DRAFT_0151 0.41 -0.4
148,196 + B158DRAFT_0151 0.42 -0.1
148,196 + B158DRAFT_0151 0.42 +0.2
148,196 + B158DRAFT_0151 0.42 -0.1
148,196 + B158DRAFT_0151 0.42 +0.9
148,196 + B158DRAFT_0151 0.42 -0.1
148,201 + B158DRAFT_0151 0.42 -0.4
148,201 + B158DRAFT_0151 0.42 -0.0
148,201 + B158DRAFT_0151 0.42 -0.0
148,201 + B158DRAFT_0151 0.42 -0.2
148,204 - B158DRAFT_0151 0.42 -0.2
148,204 - B158DRAFT_0151 0.42 +0.4
148,204 - B158DRAFT_0151 0.42 +0.0
148,209 - B158DRAFT_0151 0.43 -0.1
148,209 - B158DRAFT_0151 0.43 +0.1
148,209 - B158DRAFT_0151 0.43 -0.5
148,209 - B158DRAFT_0151 0.43 -0.2
148,209 - B158DRAFT_0151 0.43 -0.0
148,228 + B158DRAFT_0151 0.44 +0.1
148,258 + B158DRAFT_0151 0.47 +0.1
148,318 + B158DRAFT_0151 0.51 +0.1
148,332 + B158DRAFT_0151 0.52 +0.0
148,340 - B158DRAFT_0151 0.53 -0.2
148,340 - B158DRAFT_0151 0.53 +0.1
148,340 - B158DRAFT_0151 0.53 -0.1
148,421 + B158DRAFT_0151 0.59 -0.3
148,531 - B158DRAFT_0151 0.68 +0.2
148,542 - B158DRAFT_0151 0.68 -0.1
148,568 - B158DRAFT_0151 0.70 -0.4
148,635 - B158DRAFT_0151 0.75 +0.1
148,664 - B158DRAFT_0151 0.78 -0.4
148,708 + B158DRAFT_0151 0.81 -0.3
148,723 + B158DRAFT_0151 0.82 +0.1
148,723 + B158DRAFT_0151 0.82 -0.6
148,791 + B158DRAFT_0151 0.87 -0.2
148,799 - B158DRAFT_0151 0.88 -0.2
148,799 - B158DRAFT_0151 0.88 -0.2
148,839 - -0.1
148,846 - -0.0
148,849 + -0.1
148,925 - -0.2
149,036 - -0.3
149,121 - B158DRAFT_0152 0.17 -0.4
149,121 - B158DRAFT_0152 0.17 -0.5
149,196 - B158DRAFT_0152 0.25 +0.1
149,198 + B158DRAFT_0152 0.25 +0.1
149,206 - B158DRAFT_0152 0.26 -0.9
149,206 - B158DRAFT_0152 0.26 -1.0
149,206 - B158DRAFT_0152 0.26 -0.2
149,206 - B158DRAFT_0152 0.26 -0.5
149,240 - B158DRAFT_0152 0.30 -0.2
149,240 - B158DRAFT_0152 0.30 +0.3
149,245 - B158DRAFT_0152 0.30 -0.2
149,249 + B158DRAFT_0152 0.31 -0.2
149,257 - B158DRAFT_0152 0.32 -0.3
149,257 - B158DRAFT_0152 0.32 -0.3
149,282 + B158DRAFT_0152 0.35 +0.1
149,282 + B158DRAFT_0152 0.35 -0.2
149,282 + B158DRAFT_0152 0.35 -0.2
149,282 + B158DRAFT_0152 0.35 +0.3
149,282 + B158DRAFT_0152 0.35 -0.8
149,282 + B158DRAFT_0152 0.35 -0.6
149,282 + B158DRAFT_0152 0.35 -0.3
149,290 - B158DRAFT_0152 0.35 +0.0
149,290 - B158DRAFT_0152 0.35 -1.1
149,290 - B158DRAFT_0152 0.35 -0.3
149,321 + B158DRAFT_0152 0.39 -1.4
149,321 + B158DRAFT_0152 0.39 -0.1
149,330 + B158DRAFT_0152 0.40 +0.2
149,330 + B158DRAFT_0152 0.40 +0.0
149,338 - B158DRAFT_0152 0.41 +0.3
149,388 - B158DRAFT_0152 0.46 +0.1
149,395 + B158DRAFT_0152 0.47 +0.4
149,545 + B158DRAFT_0152 0.64 -0.2
149,603 + B158DRAFT_0152 0.70 -0.3
149,613 + B158DRAFT_0152 0.71 -0.1
149,624 + B158DRAFT_0152 0.72 -0.3
149,632 - B158DRAFT_0152 0.73 +0.1
149,641 + B158DRAFT_0152 0.74 -0.0
149,649 - B158DRAFT_0152 0.75 -0.1
149,689 + B158DRAFT_0152 0.79 +0.5
149,689 + B158DRAFT_0152 0.79 -0.3
149,689 + B158DRAFT_0152 0.79 -0.2
149,689 + B158DRAFT_0152 0.79 -0.2
149,697 - B158DRAFT_0152 0.80 -0.1
149,697 - B158DRAFT_0152 0.80 -0.4
149,697 - B158DRAFT_0152 0.80 -0.1
149,697 - B158DRAFT_0152 0.80 -0.4
149,697 - B158DRAFT_0152 0.80 -0.5
149,763 - B158DRAFT_0152 0.88 -0.0
149,763 - B158DRAFT_0152 0.88 -0.2
149,795 - +0.4
149,811 + +0.1
149,811 + +0.1
149,811 + +0.1
149,811 + +0.2
149,811 + -0.1
149,819 - +0.1
149,846 + -0.3
149,958 + -0.1
150,161 + -2.8
150,600 + B158DRAFT_0153 0.30 -2.8
150,735 + B158DRAFT_0153 0.37 -1.8
150,776 + B158DRAFT_0153 0.39 -2.5

Or see this region's nucleotide sequence