Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_933 and PfGW456L13_934 are separated by 305 nucleotides PfGW456L13_934 and PfGW456L13_935 are separated by 145 nucleotides
PfGW456L13_933 - FIG00956490: hypothetical protein, at 1,045,790 to 1,046,431
_933
PfGW456L13_934 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 1,046,737 to 1,047,702
_934
PfGW456L13_935 - Penicillin acylase II (EC 3.5.1.11), at 1,047,848 to 1,050,247
_935
Position (kb)
1046
1047
1048 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1045.810 kb on + strand at 1045.810 kb on + strand at 1045.810 kb on + strand at 1046.011 kb on - strand, within PfGW456L13_933 at 1046.011 kb on - strand, within PfGW456L13_933 at 1046.149 kb on - strand, within PfGW456L13_933 at 1046.256 kb on + strand, within PfGW456L13_933 at 1046.256 kb on + strand, within PfGW456L13_933 at 1046.256 kb on + strand, within PfGW456L13_933 at 1046.256 kb on + strand, within PfGW456L13_933 at 1046.257 kb on - strand, within PfGW456L13_933 at 1046.257 kb on - strand, within PfGW456L13_933 at 1046.257 kb on - strand, within PfGW456L13_933 at 1046.274 kb on + strand, within PfGW456L13_933 at 1046.274 kb on + strand, within PfGW456L13_933 at 1046.275 kb on - strand, within PfGW456L13_933 at 1046.275 kb on - strand, within PfGW456L13_933 at 1046.275 kb on - strand, within PfGW456L13_933 at 1046.338 kb on - strand, within PfGW456L13_933 at 1046.338 kb on - strand, within PfGW456L13_933 at 1046.368 kb on - strand at 1046.368 kb on - strand at 1046.368 kb on - strand at 1046.368 kb on - strand at 1046.368 kb on - strand at 1046.543 kb on - strand at 1046.598 kb on + strand at 1046.598 kb on + strand at 1046.599 kb on - strand at 1046.599 kb on - strand at 1046.692 kb on + strand at 1046.947 kb on + strand, within PfGW456L13_934 at 1046.948 kb on - strand, within PfGW456L13_934 at 1046.948 kb on - strand, within PfGW456L13_934 at 1046.948 kb on - strand, within PfGW456L13_934 at 1047.117 kb on + strand, within PfGW456L13_934 at 1047.118 kb on - strand, within PfGW456L13_934 at 1047.118 kb on - strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.187 kb on + strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.188 kb on - strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.250 kb on + strand, within PfGW456L13_934 at 1047.251 kb on - strand, within PfGW456L13_934 at 1047.251 kb on - strand, within PfGW456L13_934 at 1047.251 kb on - strand, within PfGW456L13_934 at 1047.251 kb on - strand, within PfGW456L13_934 at 1047.251 kb on - strand, within PfGW456L13_934 at 1047.254 kb on + strand, within PfGW456L13_934 at 1047.254 kb on + strand, within PfGW456L13_934 at 1047.254 kb on + strand, within PfGW456L13_934 at 1047.254 kb on + strand, within PfGW456L13_934 at 1047.254 kb on + strand, within PfGW456L13_934 at 1047.255 kb on - strand, within PfGW456L13_934 at 1047.255 kb on - strand, within PfGW456L13_934 at 1047.255 kb on - strand, within PfGW456L13_934 at 1047.403 kb on + strand, within PfGW456L13_934 at 1047.403 kb on + strand, within PfGW456L13_934 at 1047.403 kb on + strand, within PfGW456L13_934 at 1047.403 kb on + strand, within PfGW456L13_934 at 1047.404 kb on - strand, within PfGW456L13_934 at 1047.404 kb on - strand, within PfGW456L13_934 at 1047.598 kb on + strand, within PfGW456L13_934 at 1047.598 kb on + strand, within PfGW456L13_934 at 1047.599 kb on - strand, within PfGW456L13_934 at 1047.599 kb on - strand, within PfGW456L13_934 at 1047.599 kb on - strand, within PfGW456L13_934 at 1047.713 kb on + strand at 1047.713 kb on + strand at 1047.721 kb on + strand at 1047.721 kb on + strand at 1047.721 kb on + strand at 1047.721 kb on + strand at 1047.776 kb on + strand at 1047.776 kb on + strand at 1047.777 kb on - strand at 1047.777 kb on - strand at 1047.777 kb on - strand at 1047.777 kb on - strand at 1047.777 kb on - strand at 1047.777 kb on - strand at 1047.777 kb on - strand at 1047.849 kb on + strand at 1047.849 kb on + strand at 1047.854 kb on + strand at 1047.854 kb on + strand at 1047.854 kb on + strand at 1047.854 kb on + strand at 1047.854 kb on + strand at 1047.854 kb on + strand at 1047.854 kb on + strand at 1047.854 kb on + strand at 1047.855 kb on - strand at 1047.855 kb on - strand at 1047.883 kb on + strand at 1047.883 kb on + strand at 1047.884 kb on - strand at 1047.933 kb on + strand at 1047.933 kb on + strand at 1047.933 kb on + strand at 1047.933 kb on + strand at 1047.933 kb on + strand at 1047.933 kb on + strand at 1047.933 kb on + strand at 1047.934 kb on - strand at 1047.934 kb on - strand at 1047.934 kb on - strand at 1047.934 kb on - strand at 1047.934 kb on - strand at 1047.934 kb on - strand at 1047.948 kb on + strand at 1047.949 kb on - strand at 1047.949 kb on - strand at 1047.969 kb on + strand at 1047.969 kb on + strand at 1047.969 kb on + strand at 1047.970 kb on - strand at 1047.970 kb on - strand at 1048.069 kb on - strand at 1048.069 kb on - strand at 1048.069 kb on - strand at 1048.622 kb on - strand, within PfGW456L13_935
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,045,810 + -0.2 1,045,810 + -0.4 1,045,810 + -0.3 1,046,011 - PfGW456L13_933 0.34 -0.6 1,046,011 - PfGW456L13_933 0.34 -1.1 1,046,149 - PfGW456L13_933 0.56 -0.5 1,046,256 + PfGW456L13_933 0.73 +0.4 1,046,256 + PfGW456L13_933 0.73 +0.8 1,046,256 + PfGW456L13_933 0.73 -0.1 1,046,256 + PfGW456L13_933 0.73 -0.1 1,046,257 - PfGW456L13_933 0.73 -0.2 1,046,257 - PfGW456L13_933 0.73 +0.2 1,046,257 - PfGW456L13_933 0.73 +1.4 1,046,274 + PfGW456L13_933 0.75 -0.5 1,046,274 + PfGW456L13_933 0.75 -1.0 1,046,275 - PfGW456L13_933 0.76 -0.8 1,046,275 - PfGW456L13_933 0.76 -1.4 1,046,275 - PfGW456L13_933 0.76 -1.4 1,046,338 - PfGW456L13_933 0.85 +1.1 1,046,338 - PfGW456L13_933 0.85 -0.9 1,046,368 - -0.4 1,046,368 - +0.3 1,046,368 - -1.4 1,046,368 - -0.1 1,046,368 - +0.6 1,046,543 - -0.0 1,046,598 + +0.9 1,046,598 + +1.1 1,046,599 - -0.2 1,046,599 - -0.3 1,046,692 + +0.3 1,046,947 + PfGW456L13_934 0.22 -0.2 1,046,948 - PfGW456L13_934 0.22 +0.3 1,046,948 - PfGW456L13_934 0.22 +0.8 1,046,948 - PfGW456L13_934 0.22 +1.2 1,047,117 + PfGW456L13_934 0.39 -0.7 1,047,118 - PfGW456L13_934 0.39 -1.4 1,047,118 - PfGW456L13_934 0.39 +0.2 1,047,187 + PfGW456L13_934 0.47 -1.5 1,047,187 + PfGW456L13_934 0.47 -1.4 1,047,187 + PfGW456L13_934 0.47 +0.8 1,047,187 + PfGW456L13_934 0.47 -0.5 1,047,187 + PfGW456L13_934 0.47 -1.8 1,047,187 + PfGW456L13_934 0.47 -0.3 1,047,187 + PfGW456L13_934 0.47 +0.1 1,047,187 + PfGW456L13_934 0.47 +0.2 1,047,187 + PfGW456L13_934 0.47 -0.9 1,047,188 - PfGW456L13_934 0.47 -0.1 1,047,188 - PfGW456L13_934 0.47 -1.0 1,047,188 - PfGW456L13_934 0.47 -0.7 1,047,188 - PfGW456L13_934 0.47 -0.5 1,047,188 - PfGW456L13_934 0.47 +1.0 1,047,188 - PfGW456L13_934 0.47 +0.8 1,047,188 - PfGW456L13_934 0.47 -0.1 1,047,188 - PfGW456L13_934 0.47 +0.5 1,047,188 - PfGW456L13_934 0.47 +0.5 1,047,250 + PfGW456L13_934 0.53 -0.7 1,047,250 + PfGW456L13_934 0.53 -0.4 1,047,250 + PfGW456L13_934 0.53 +1.3 1,047,250 + PfGW456L13_934 0.53 +1.1 1,047,250 + PfGW456L13_934 0.53 -2.8 1,047,250 + PfGW456L13_934 0.53 -0.3 1,047,250 + PfGW456L13_934 0.53 +0.9 1,047,250 + PfGW456L13_934 0.53 -0.3 1,047,250 + PfGW456L13_934 0.53 -0.5 1,047,251 - PfGW456L13_934 0.53 -0.1 1,047,251 - PfGW456L13_934 0.53 -1.0 1,047,251 - PfGW456L13_934 0.53 +0.1 1,047,251 - PfGW456L13_934 0.53 -0.2 1,047,251 - PfGW456L13_934 0.53 +1.0 1,047,254 + PfGW456L13_934 0.54 +1.1 1,047,254 + PfGW456L13_934 0.54 -1.1 1,047,254 + PfGW456L13_934 0.54 -0.1 1,047,254 + PfGW456L13_934 0.54 +1.0 1,047,254 + PfGW456L13_934 0.54 +1.3 1,047,255 - PfGW456L13_934 0.54 +0.2 1,047,255 - PfGW456L13_934 0.54 -0.1 1,047,255 - PfGW456L13_934 0.54 +0.1 1,047,403 + PfGW456L13_934 0.69 +0.8 1,047,403 + PfGW456L13_934 0.69 -0.2 1,047,403 + PfGW456L13_934 0.69 +0.1 1,047,403 + PfGW456L13_934 0.69 -1.1 1,047,404 - PfGW456L13_934 0.69 -1.2 1,047,404 - PfGW456L13_934 0.69 -0.0 1,047,598 + PfGW456L13_934 0.89 -0.7 1,047,598 + PfGW456L13_934 0.89 +0.4 1,047,599 - PfGW456L13_934 0.89 -0.0 1,047,599 - PfGW456L13_934 0.89 +0.3 1,047,599 - PfGW456L13_934 0.89 +0.1 1,047,713 + -0.7 1,047,713 + +0.8 1,047,721 + +0.3 1,047,721 + +0.1 1,047,721 + +0.6 1,047,721 + +0.1 1,047,776 + +0.9 1,047,776 + +0.2 1,047,777 - -0.2 1,047,777 - +0.1 1,047,777 - -0.4 1,047,777 - +0.5 1,047,777 - -0.1 1,047,777 - +0.7 1,047,777 - +0.4 1,047,849 + -0.8 1,047,849 + +1.5 1,047,854 + -0.4 1,047,854 + +0.6 1,047,854 + +1.2 1,047,854 + +0.2 1,047,854 + -0.8 1,047,854 + +0.9 1,047,854 + -0.3 1,047,854 + -1.0 1,047,855 - -0.3 1,047,855 - +0.2 1,047,883 + -0.5 1,047,883 + -0.7 1,047,884 - -1.2 1,047,933 + +0.4 1,047,933 + -0.0 1,047,933 + -0.2 1,047,933 + +0.2 1,047,933 + -1.2 1,047,933 + -0.7 1,047,933 + -1.1 1,047,934 - +0.3 1,047,934 - -0.6 1,047,934 - -1.8 1,047,934 - -0.5 1,047,934 - +0.4 1,047,934 - -0.3 1,047,948 + +0.1 1,047,949 - -0.3 1,047,949 - +0.3 1,047,969 + +0.9 1,047,969 + +0.0 1,047,969 + -0.0 1,047,970 - +0.7 1,047,970 - -0.7 1,048,069 - +0.3 1,048,069 - +1.3 1,048,069 - +0.1 1,048,622 - PfGW456L13_935 0.32 +1.5
Or see this region's nucleotide sequence