Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_851 and PfGW456L13_852 are separated by 209 nucleotides PfGW456L13_852 and PfGW456L13_853 are separated by 124 nucleotides PfGW456L13_853 and PfGW456L13_854 are separated by 119 nucleotides
PfGW456L13_851 - DNA-binding protein inhibitor Id-2-related protein, at 958,185 to 958,430
_851
PfGW456L13_852 - FIG00954215: hypothetical protein, at 958,640 to 958,924
_852
PfGW456L13_853 - Glutathione S-transferase N-terminal domain protein (EC 2.5.1.18), at 959,049 to 959,708
_853
PfGW456L13_854 - Argininosuccinate lyase (EC 4.3.2.1), at 959,828 to 961,222
_854
Position (kb) 959
960 Strain fitness (log2 ratio) -2
-1
0
1
2 at 958.050 kb on - strand at 958.073 kb on - strand at 958.194 kb on + strand at 958.194 kb on + strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.422 kb on - strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.449 kb on - strand at 958.529 kb on + strand at 958.530 kb on - strand at 958.530 kb on - strand at 958.570 kb on + strand at 958.571 kb on - strand at 958.623 kb on + strand at 958.624 kb on - strand at 958.641 kb on + strand at 958.642 kb on - strand at 958.690 kb on - strand, within PfGW456L13_852 at 958.785 kb on + strand, within PfGW456L13_852 at 959.005 kb on + strand at 959.005 kb on + strand at 959.006 kb on - strand at 959.006 kb on - strand at 959.006 kb on - strand at 959.006 kb on - strand at 959.007 kb on + strand at 959.007 kb on + strand at 959.007 kb on + strand at 959.008 kb on - strand at 959.008 kb on - strand at 959.078 kb on + strand at 959.078 kb on + strand at 959.078 kb on + strand at 959.078 kb on + strand at 959.082 kb on + strand at 959.082 kb on + strand at 959.082 kb on + strand at 959.082 kb on + strand at 959.082 kb on + strand at 959.082 kb on + strand at 959.083 kb on - strand at 959.083 kb on - strand at 959.083 kb on - strand at 959.083 kb on - strand at 959.083 kb on - strand at 959.083 kb on - strand at 959.083 kb on - strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.085 kb on + strand at 959.086 kb on - strand at 959.086 kb on - strand at 959.086 kb on - strand at 959.086 kb on - strand at 959.086 kb on - strand at 959.086 kb on - strand at 959.086 kb on - strand at 959.086 kb on - strand at 959.086 kb on - strand at 959.137 kb on + strand, within PfGW456L13_853 at 959.137 kb on + strand, within PfGW456L13_853 at 959.137 kb on + strand, within PfGW456L13_853 at 959.137 kb on + strand, within PfGW456L13_853 at 959.145 kb on + strand, within PfGW456L13_853 at 959.146 kb on - strand, within PfGW456L13_853 at 959.146 kb on - strand, within PfGW456L13_853 at 959.146 kb on - strand, within PfGW456L13_853 at 959.146 kb on - strand, within PfGW456L13_853 at 959.146 kb on - strand, within PfGW456L13_853 at 959.209 kb on + strand, within PfGW456L13_853 at 959.209 kb on + strand, within PfGW456L13_853 at 959.210 kb on - strand, within PfGW456L13_853 at 959.250 kb on + strand, within PfGW456L13_853 at 959.250 kb on + strand, within PfGW456L13_853 at 959.250 kb on + strand, within PfGW456L13_853 at 959.250 kb on + strand, within PfGW456L13_853 at 959.250 kb on + strand, within PfGW456L13_853 at 959.251 kb on - strand, within PfGW456L13_853 at 959.251 kb on - strand, within PfGW456L13_853 at 959.251 kb on - strand, within PfGW456L13_853 at 959.343 kb on + strand, within PfGW456L13_853 at 959.343 kb on + strand, within PfGW456L13_853 at 959.343 kb on + strand, within PfGW456L13_853 at 959.343 kb on + strand, within PfGW456L13_853 at 959.344 kb on - strand, within PfGW456L13_853 at 959.344 kb on - strand, within PfGW456L13_853 at 959.344 kb on - strand, within PfGW456L13_853 at 959.344 kb on - strand, within PfGW456L13_853 at 959.371 kb on - strand, within PfGW456L13_853 at 959.482 kb on - strand, within PfGW456L13_853 at 959.482 kb on - strand, within PfGW456L13_853 at 959.482 kb on - strand, within PfGW456L13_853 at 959.482 kb on - strand, within PfGW456L13_853 at 959.482 kb on - strand, within PfGW456L13_853 at 959.482 kb on - strand at 959.482 kb on - strand, within PfGW456L13_853 at 959.482 kb on - strand, within PfGW456L13_853 at 959.517 kb on + strand, within PfGW456L13_853 at 959.517 kb on + strand, within PfGW456L13_853 at 959.517 kb on + strand, within PfGW456L13_853 at 959.517 kb on + strand, within PfGW456L13_853 at 959.517 kb on + strand, within PfGW456L13_853 at 959.517 kb on + strand, within PfGW456L13_853 at 959.517 kb on + strand, within PfGW456L13_853 at 959.518 kb on - strand, within PfGW456L13_853 at 959.706 kb on + strand at 959.789 kb on + strand at 959.789 kb on + strand at 959.789 kb on + strand at 959.789 kb on + strand at 959.790 kb on - strand at 959.790 kb on - strand at 959.790 kb on - strand at 959.790 kb on - strand at 959.790 kb on - strand at 959.829 kb on + strand at 960.027 kb on + strand, within PfGW456L13_854 at 960.028 kb on - strand, within PfGW456L13_854 at 960.091 kb on - strand, within PfGW456L13_854 at 960.091 kb on - strand, within PfGW456L13_854 at 960.258 kb on + strand, within PfGW456L13_854 at 960.259 kb on - strand, within PfGW456L13_854 at 960.576 kb on + strand, within PfGW456L13_854 at 960.577 kb on - strand, within PfGW456L13_854
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 958,050 - -0.7 958,073 - +0.5 958,194 + +0.5 958,194 + -1.0 958,195 - +0.1 958,195 - +0.4 958,195 - +0.0 958,195 - -0.5 958,195 - +0.4 958,195 - +0.7 958,422 - +0.5 958,430 + -0.0 958,430 + -1.1 958,430 + +0.4 958,430 + -0.9 958,430 + +0.1 958,430 + -0.1 958,430 + +1.0 958,430 + +0.1 958,430 + -1.1 958,430 + -0.4 958,430 + +0.2 958,430 + +0.1 958,430 + -0.0 958,431 - +1.5 958,431 - -0.7 958,431 - -0.7 958,431 - -0.3 958,431 - -1.9 958,431 - +0.7 958,431 - +0.5 958,431 - +1.3 958,449 - +0.6 958,529 + +0.6 958,530 - -1.0 958,530 - +0.6 958,570 + +0.2 958,571 - -0.4 958,623 + -0.6 958,624 - +0.1 958,641 + +1.3 958,642 - +0.3 958,690 - PfGW456L13_852 0.18 +0.7 958,785 + PfGW456L13_852 0.51 +0.4 959,005 + +1.6 959,005 + -0.9 959,006 - -1.9 959,006 - +0.8 959,006 - +0.2 959,006 - -0.3 959,007 + +0.2 959,007 + +0.1 959,007 + +0.7 959,008 - -0.1 959,008 - +0.1 959,078 + -0.2 959,078 + +0.7 959,078 + -0.6 959,078 + -0.6 959,082 + -0.2 959,082 + +0.5 959,082 + -0.1 959,082 + +1.2 959,082 + -0.1 959,082 + +0.1 959,083 - +0.4 959,083 - +0.1 959,083 - +0.1 959,083 - -0.1 959,083 - -0.4 959,083 - -0.0 959,083 - +0.3 959,085 + -0.5 959,085 + +0.0 959,085 + +0.3 959,085 + +1.0 959,085 + +0.8 959,085 + -0.1 959,085 + +0.7 959,085 + -0.9 959,085 + +0.0 959,085 + +0.0 959,085 + +0.2 959,085 + +0.3 959,086 - -0.2 959,086 - -0.4 959,086 - +0.5 959,086 - -0.9 959,086 - +0.2 959,086 - +0.1 959,086 - +0.0 959,086 - -0.4 959,086 - +0.4 959,137 + PfGW456L13_853 0.13 +0.9 959,137 + PfGW456L13_853 0.13 +0.8 959,137 + PfGW456L13_853 0.13 +0.4 959,137 + PfGW456L13_853 0.13 -0.2 959,145 + PfGW456L13_853 0.15 -0.7 959,146 - PfGW456L13_853 0.15 +0.7 959,146 - PfGW456L13_853 0.15 -0.7 959,146 - PfGW456L13_853 0.15 -0.3 959,146 - PfGW456L13_853 0.15 -0.3 959,146 - PfGW456L13_853 0.15 +0.9 959,209 + PfGW456L13_853 0.24 -0.3 959,209 + PfGW456L13_853 0.24 +0.0 959,210 - PfGW456L13_853 0.24 -0.1 959,250 + PfGW456L13_853 0.30 +0.9 959,250 + PfGW456L13_853 0.30 +0.5 959,250 + PfGW456L13_853 0.30 +0.3 959,250 + PfGW456L13_853 0.30 +2.5 959,250 + PfGW456L13_853 0.30 -0.1 959,251 - PfGW456L13_853 0.31 +0.4 959,251 - PfGW456L13_853 0.31 -2.0 959,251 - PfGW456L13_853 0.31 +0.5 959,343 + PfGW456L13_853 0.45 -0.8 959,343 + PfGW456L13_853 0.45 +0.6 959,343 + PfGW456L13_853 0.45 +0.4 959,343 + PfGW456L13_853 0.45 +1.6 959,344 - PfGW456L13_853 0.45 +0.1 959,344 - PfGW456L13_853 0.45 -0.2 959,344 - PfGW456L13_853 0.45 +1.0 959,344 - PfGW456L13_853 0.45 -1.6 959,371 - PfGW456L13_853 0.49 +0.3 959,482 - PfGW456L13_853 0.66 +1.4 959,482 - PfGW456L13_853 0.66 +0.5 959,482 - PfGW456L13_853 0.66 +1.1 959,482 - PfGW456L13_853 0.66 -0.7 959,482 - PfGW456L13_853 0.66 -0.7 959,482 - +2.1 959,482 - PfGW456L13_853 0.66 -0.5 959,482 - PfGW456L13_853 0.66 -0.9 959,517 + PfGW456L13_853 0.71 +0.2 959,517 + PfGW456L13_853 0.71 +0.1 959,517 + PfGW456L13_853 0.71 -0.3 959,517 + PfGW456L13_853 0.71 -0.6 959,517 + PfGW456L13_853 0.71 +0.9 959,517 + PfGW456L13_853 0.71 +0.4 959,517 + PfGW456L13_853 0.71 +0.5 959,518 - PfGW456L13_853 0.71 +0.4 959,706 + +0.6 959,789 + +1.5 959,789 + +0.8 959,789 + -0.9 959,789 + -1.2 959,790 - -1.7 959,790 - -0.2 959,790 - +1.9 959,790 - +1.2 959,790 - +1.4 959,829 + -0.3 960,027 + PfGW456L13_854 0.14 -1.3 960,028 - PfGW456L13_854 0.14 -2.1 960,091 - PfGW456L13_854 0.19 -1.3 960,091 - PfGW456L13_854 0.19 -2.2 960,258 + PfGW456L13_854 0.31 +0.1 960,259 - PfGW456L13_854 0.31 -1.0 960,576 + PfGW456L13_854 0.54 -2.3 960,577 - PfGW456L13_854 0.54 -2.4
Or see this region's nucleotide sequence