Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_510 and PfGW456L13_511 are separated by 130 nucleotides PfGW456L13_511 and PfGW456L13_512 are separated by 277 nucleotides PfGW456L13_512 and PfGW456L13_513 are separated by 2 nucleotides PfGW456L13_513 and PfGW456L13_514 are separated by 12 nucleotides
PfGW456L13_510 - FIG00960943: hypothetical protein, at 584,204 to 584,449
_510
PfGW456L13_511 - FIG00965470: hypothetical protein, at 584,580 to 585,035
_511
PfGW456L13_512 - Putative membrane-bound ClpP-class protease associated with aq_911, at 585,313 to 585,774
_512
PfGW456L13_513 - Putative stomatin/prohibitin-family membrane protease subunit aq_911, at 585,777 to 586,535
_513
PfGW456L13_514 - Adenylylsulfate kinase (EC 2.7.1.25), at 586,548 to 587,153
_514
Position (kb) 585
586 Strain fitness (log2 ratio) -1
0
1 at 584.374 kb on + strand, within PfGW456L13_510 at 584.374 kb on + strand, within PfGW456L13_510 at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand, within PfGW456L13_511 at 584.677 kb on + strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.678 kb on - strand, within PfGW456L13_511 at 584.728 kb on + strand, within PfGW456L13_511 at 584.729 kb on - strand, within PfGW456L13_511 at 584.875 kb on + strand, within PfGW456L13_511 at 584.876 kb on - strand, within PfGW456L13_511 at 584.876 kb on - strand, within PfGW456L13_511 at 584.876 kb on - strand, within PfGW456L13_511 at 584.930 kb on + strand, within PfGW456L13_511 at 584.990 kb on - strand at 584.990 kb on - strand at 585.036 kb on - strand at 585.036 kb on - strand at 585.084 kb on + strand at 585.084 kb on + strand at 585.084 kb on + strand at 585.085 kb on - strand at 585.085 kb on - strand at 585.085 kb on - strand at 585.100 kb on + strand at 585.104 kb on - strand at 585.111 kb on + strand at 585.197 kb on + strand at 585.198 kb on - strand at 585.198 kb on - strand at 585.198 kb on - strand at 585.198 kb on - strand at 585.204 kb on + strand at 585.204 kb on + strand at 585.205 kb on - strand at 585.272 kb on + strand at 585.273 kb on - strand at 585.362 kb on + strand, within PfGW456L13_512 at 585.362 kb on + strand, within PfGW456L13_512 at 585.363 kb on - strand, within PfGW456L13_512 at 585.363 kb on - strand, within PfGW456L13_512 at 585.397 kb on + strand, within PfGW456L13_512 at 585.397 kb on + strand, within PfGW456L13_512 at 585.397 kb on + strand, within PfGW456L13_512 at 585.520 kb on + strand, within PfGW456L13_512 at 585.521 kb on - strand, within PfGW456L13_512 at 585.772 kb on + strand at 585.772 kb on + strand at 585.772 kb on + strand at 585.773 kb on - strand at 585.773 kb on - strand at 585.773 kb on - strand at 585.808 kb on + strand at 585.808 kb on + strand at 585.808 kb on + strand at 585.809 kb on - strand at 586.041 kb on + strand, within PfGW456L13_513 at 586.041 kb on + strand, within PfGW456L13_513 at 586.428 kb on + strand, within PfGW456L13_513 at 586.429 kb on - strand, within PfGW456L13_513 at 586.429 kb on - strand, within PfGW456L13_513 at 586.664 kb on - strand, within PfGW456L13_514 at 586.717 kb on + strand, within PfGW456L13_514 at 586.718 kb on - strand, within PfGW456L13_514
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 584,374 + PfGW456L13_510 0.69 -0.2 584,374 + PfGW456L13_510 0.69 +0.4 584,677 + PfGW456L13_511 0.21 -0.8 584,677 + +0.1 584,677 + PfGW456L13_511 0.21 +0.7 584,677 + PfGW456L13_511 0.21 -0.1 584,677 + PfGW456L13_511 0.21 +0.3 584,677 + PfGW456L13_511 0.21 +0.5 584,677 + PfGW456L13_511 0.21 +0.1 584,678 - PfGW456L13_511 0.21 -0.1 584,678 - PfGW456L13_511 0.21 +1.4 584,678 - PfGW456L13_511 0.21 -0.4 584,678 - PfGW456L13_511 0.21 +0.5 584,678 - PfGW456L13_511 0.21 -0.3 584,678 - PfGW456L13_511 0.21 -0.3 584,678 - PfGW456L13_511 0.21 -0.4 584,678 - PfGW456L13_511 0.21 +0.7 584,728 + PfGW456L13_511 0.32 -0.6 584,729 - PfGW456L13_511 0.33 +0.1 584,875 + PfGW456L13_511 0.65 -1.3 584,876 - PfGW456L13_511 0.65 -1.0 584,876 - PfGW456L13_511 0.65 +0.5 584,876 - PfGW456L13_511 0.65 -1.5 584,930 + PfGW456L13_511 0.77 -0.2 584,990 - +0.6 584,990 - -0.4 585,036 - +0.3 585,036 - -0.5 585,084 + +1.4 585,084 + +1.0 585,084 + +0.0 585,085 - -0.1 585,085 - -0.5 585,085 - +0.1 585,100 + -0.6 585,104 - -0.4 585,111 + +0.4 585,197 + +0.5 585,198 - -0.0 585,198 - +1.1 585,198 - +0.1 585,198 - +1.0 585,204 + +0.5 585,204 + +0.1 585,205 - -0.1 585,272 + -1.6 585,273 - -0.6 585,362 + PfGW456L13_512 0.11 -0.9 585,362 + PfGW456L13_512 0.11 -0.5 585,363 - PfGW456L13_512 0.11 -1.7 585,363 - PfGW456L13_512 0.11 +1.0 585,397 + PfGW456L13_512 0.18 -1.3 585,397 + PfGW456L13_512 0.18 -0.7 585,397 + PfGW456L13_512 0.18 -0.8 585,520 + PfGW456L13_512 0.45 -0.5 585,521 - PfGW456L13_512 0.45 +0.5 585,772 + +1.0 585,772 + -1.3 585,772 + -1.5 585,773 - -0.9 585,773 - -1.2 585,773 - -0.1 585,808 + +0.8 585,808 + -1.5 585,808 + -0.6 585,809 - -0.4 586,041 + PfGW456L13_513 0.35 -0.7 586,041 + PfGW456L13_513 0.35 -0.1 586,428 + PfGW456L13_513 0.86 +0.3 586,429 - PfGW456L13_513 0.86 +0.8 586,429 - PfGW456L13_513 0.86 +0.4 586,664 - PfGW456L13_514 0.19 +0.7 586,717 + PfGW456L13_514 0.28 -0.1 586,718 - PfGW456L13_514 0.28 +0.4
Or see this region's nucleotide sequence