Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4033 and PfGW456L13_4034 are separated by 229 nucleotides PfGW456L13_4034 and PfGW456L13_4035 are separated by 10 nucleotides PfGW456L13_4035 and PfGW456L13_4036 are separated by 92 nucleotides PfGW456L13_4036 and PfGW456L13_4037 are separated by 94 nucleotides
PfGW456L13_4033 - Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family, at 4,526,061 to 4,526,768
_4033
PfGW456L13_4034 - SOS-response repressor and protease LexA (EC 3.4.21.88), at 4,526,998 to 4,527,606
_4034
PfGW456L13_4035 - Cell division inhibitor-related protein, at 4,527,617 to 4,528,093
_4035
PfGW456L13_4036 - FIG00954079: hypothetical protein, at 4,528,186 to 4,528,419
_4036
PfGW456L13_4037 - FIG00953287: hypothetical protein, at 4,528,514 to 4,529,038
_4037
Position (kb)
4527
4528
4529 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4526.804 kb on - strand at 4526.866 kb on + strand at 4526.866 kb on + strand at 4526.867 kb on - strand at 4526.867 kb on - strand at 4526.867 kb on - strand at 4526.867 kb on - strand at 4526.867 kb on - strand at 4526.957 kb on - strand at 4526.958 kb on + strand at 4526.958 kb on + strand at 4526.958 kb on + strand at 4526.958 kb on + strand at 4526.960 kb on + strand at 4526.960 kb on + strand at 4526.997 kb on + strand at 4526.997 kb on + strand at 4527.002 kb on + strand at 4527.708 kb on + strand, within PfGW456L13_4035 at 4527.898 kb on + strand, within PfGW456L13_4035 at 4527.982 kb on + strand, within PfGW456L13_4035 at 4528.156 kb on - strand at 4528.336 kb on - strand, within PfGW456L13_4036 at 4528.336 kb on - strand, within PfGW456L13_4036 at 4528.387 kb on + strand, within PfGW456L13_4036 at 4528.402 kb on + strand at 4528.419 kb on + strand at 4528.420 kb on - strand at 4528.420 kb on - strand at 4528.420 kb on - strand at 4528.450 kb on + strand at 4528.450 kb on + strand at 4528.450 kb on + strand at 4528.450 kb on + strand at 4528.450 kb on + strand at 4528.450 kb on + strand at 4528.450 kb on + strand at 4528.450 kb on + strand at 4528.451 kb on - strand at 4528.451 kb on - strand at 4528.451 kb on - strand at 4528.451 kb on - strand at 4528.451 kb on - strand at 4528.451 kb on - strand at 4528.451 kb on - strand at 4528.451 kb on - strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.452 kb on + strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.453 kb on - strand at 4528.454 kb on + strand at 4528.454 kb on + strand at 4528.454 kb on + strand at 4528.454 kb on + strand at 4528.454 kb on + strand at 4528.455 kb on - strand at 4528.455 kb on - strand at 4528.455 kb on - strand at 4528.455 kb on - strand at 4528.455 kb on - strand at 4528.455 kb on - strand at 4528.455 kb on - strand at 4528.848 kb on + strand, within PfGW456L13_4037 at 4528.848 kb on + strand, within PfGW456L13_4037 at 4528.848 kb on + strand, within PfGW456L13_4037 at 4528.849 kb on - strand, within PfGW456L13_4037 at 4529.022 kb on + strand at 4529.022 kb on + strand at 4529.022 kb on + strand at 4529.023 kb on - strand at 4529.023 kb on - strand at 4529.023 kb on - strand at 4529.061 kb on + strand at 4529.061 kb on + strand at 4529.061 kb on + strand at 4529.061 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 4,526,804 - -0.1 4,526,866 + +0.0 4,526,866 + -1.1 4,526,867 - +0.7 4,526,867 - -0.7 4,526,867 - -0.0 4,526,867 - -0.2 4,526,867 - +0.9 4,526,957 - +0.4 4,526,958 + +2.4 4,526,958 + +1.0 4,526,958 + -0.4 4,526,958 + +0.2 4,526,960 + +0.6 4,526,960 + -0.0 4,526,997 + -0.2 4,526,997 + +0.6 4,527,002 + +0.0 4,527,708 + PfGW456L13_4035 0.19 -2.5 4,527,898 + PfGW456L13_4035 0.59 -0.6 4,527,982 + PfGW456L13_4035 0.77 -0.5 4,528,156 - -1.6 4,528,336 - PfGW456L13_4036 0.64 -0.2 4,528,336 - PfGW456L13_4036 0.64 +0.2 4,528,387 + PfGW456L13_4036 0.86 +0.9 4,528,402 + +0.4 4,528,419 + -0.1 4,528,420 - -0.7 4,528,420 - +0.4 4,528,420 - +0.2 4,528,450 + -1.0 4,528,450 + +0.7 4,528,450 + +0.5 4,528,450 + -1.4 4,528,450 + +0.6 4,528,450 + -0.5 4,528,450 + +0.7 4,528,450 + +0.4 4,528,451 - +0.0 4,528,451 - +1.4 4,528,451 - +0.2 4,528,451 - -1.0 4,528,451 - +0.5 4,528,451 - +0.2 4,528,451 - +0.6 4,528,451 - +0.5 4,528,452 + -0.4 4,528,452 + +0.8 4,528,452 + +0.9 4,528,452 + +0.1 4,528,452 + +1.0 4,528,452 + +0.4 4,528,452 + +0.4 4,528,452 + +0.1 4,528,452 + +0.1 4,528,452 + +1.5 4,528,452 + +0.5 4,528,453 - +0.7 4,528,453 - +0.5 4,528,453 - +0.6 4,528,453 - +0.0 4,528,453 - -0.3 4,528,453 - +1.8 4,528,453 - +0.4 4,528,453 - +0.6 4,528,453 - +0.4 4,528,453 - +1.1 4,528,453 - +0.8 4,528,453 - +0.2 4,528,453 - -1.0 4,528,453 - +0.3 4,528,453 - -0.3 4,528,453 - +0.8 4,528,454 + -0.7 4,528,454 + -0.3 4,528,454 + +0.8 4,528,454 + +1.1 4,528,454 + -0.6 4,528,455 - +0.0 4,528,455 - -0.2 4,528,455 - +0.4 4,528,455 - +0.5 4,528,455 - +1.1 4,528,455 - -0.4 4,528,455 - +0.6 4,528,848 + PfGW456L13_4037 0.64 -1.2 4,528,848 + PfGW456L13_4037 0.64 -1.5 4,528,848 + PfGW456L13_4037 0.64 -3.4 4,528,849 - PfGW456L13_4037 0.64 +0.8 4,529,022 + -0.0 4,529,022 + -1.1 4,529,022 + -3.2 4,529,023 - +0.2 4,529,023 - -0.6 4,529,023 - -0.2 4,529,061 + +0.0 4,529,061 + +0.1 4,529,061 + -0.0 4,529,061 + -0.7
Or see this region's nucleotide sequence