Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3594 and PfGW456L13_3595 are separated by 128 nucleotides PfGW456L13_3595 and PfGW456L13_3596 are separated by 53 nucleotides PfGW456L13_3596 and PfGW456L13_3597 are separated by 133 nucleotides
PfGW456L13_3594 - Putative transcriptional regulator LYSR-type, at 4,046,134 to 4,047,051
_3594
PfGW456L13_3595 - Citrate-sodium symport, at 4,047,180 to 4,048,526
_3595
PfGW456L13_3596 - Transcriptional regulator, AraC family, at 4,048,580 to 4,049,353
_3596
PfGW456L13_3597 - fosmidomycin resistance protein, at 4,049,487 to 4,050,707
_3597
Position (kb)
4047
4048
4049 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4046.250 kb on - strand, within PfGW456L13_3594 at 4046.250 kb on - strand, within PfGW456L13_3594 at 4046.250 kb on - strand, within PfGW456L13_3594 at 4046.392 kb on + strand, within PfGW456L13_3594 at 4046.520 kb on - strand, within PfGW456L13_3594 at 4046.782 kb on + strand, within PfGW456L13_3594 at 4046.783 kb on - strand, within PfGW456L13_3594 at 4046.936 kb on + strand, within PfGW456L13_3594 at 4047.193 kb on - strand at 4047.265 kb on - strand at 4047.318 kb on + strand, within PfGW456L13_3595 at 4047.319 kb on - strand, within PfGW456L13_3595 at 4047.319 kb on - strand, within PfGW456L13_3595 at 4047.552 kb on + strand, within PfGW456L13_3595 at 4047.553 kb on - strand, within PfGW456L13_3595 at 4047.789 kb on + strand, within PfGW456L13_3595 at 4047.822 kb on + strand, within PfGW456L13_3595 at 4047.822 kb on + strand, within PfGW456L13_3595 at 4047.822 kb on + strand, within PfGW456L13_3595 at 4047.822 kb on + strand, within PfGW456L13_3595 at 4047.822 kb on + strand, within PfGW456L13_3595 at 4047.822 kb on + strand, within PfGW456L13_3595 at 4047.822 kb on + strand, within PfGW456L13_3595 at 4047.822 kb on + strand, within PfGW456L13_3595 at 4047.823 kb on - strand, within PfGW456L13_3595 at 4047.823 kb on - strand, within PfGW456L13_3595 at 4047.823 kb on - strand, within PfGW456L13_3595 at 4047.823 kb on - strand, within PfGW456L13_3595 at 4047.823 kb on - strand, within PfGW456L13_3595 at 4047.992 kb on + strand, within PfGW456L13_3595 at 4048.121 kb on + strand, within PfGW456L13_3595 at 4048.122 kb on - strand, within PfGW456L13_3595 at 4048.122 kb on - strand, within PfGW456L13_3595 at 4048.125 kb on + strand, within PfGW456L13_3595 at 4048.125 kb on + strand, within PfGW456L13_3595 at 4048.126 kb on - strand, within PfGW456L13_3595 at 4048.126 kb on - strand, within PfGW456L13_3595 at 4048.230 kb on + strand, within PfGW456L13_3595 at 4048.230 kb on + strand, within PfGW456L13_3595 at 4048.231 kb on - strand, within PfGW456L13_3595 at 4048.231 kb on - strand, within PfGW456L13_3595 at 4048.231 kb on - strand, within PfGW456L13_3595 at 4048.231 kb on - strand, within PfGW456L13_3595 at 4048.272 kb on + strand, within PfGW456L13_3595 at 4048.347 kb on + strand, within PfGW456L13_3595 at 4048.348 kb on - strand, within PfGW456L13_3595 at 4048.348 kb on - strand, within PfGW456L13_3595 at 4048.348 kb on - strand, within PfGW456L13_3595 at 4048.504 kb on + strand at 4048.862 kb on - strand, within PfGW456L13_3596 at 4048.876 kb on + strand, within PfGW456L13_3596 at 4048.876 kb on + strand, within PfGW456L13_3596 at 4048.876 kb on + strand, within PfGW456L13_3596 at 4048.876 kb on + strand at 4048.876 kb on + strand, within PfGW456L13_3596 at 4048.877 kb on - strand, within PfGW456L13_3596 at 4049.207 kb on + strand, within PfGW456L13_3596 at 4049.208 kb on - strand, within PfGW456L13_3596 at 4049.208 kb on - strand, within PfGW456L13_3596 at 4049.208 kb on - strand, within PfGW456L13_3596 at 4049.223 kb on + strand, within PfGW456L13_3596 at 4049.223 kb on + strand, within PfGW456L13_3596 at 4049.224 kb on - strand, within PfGW456L13_3596 at 4049.415 kb on - strand at 4049.487 kb on - strand at 4049.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 4,046,250 - PfGW456L13_3594 0.13 +0.5 4,046,250 - PfGW456L13_3594 0.13 +2.1 4,046,250 - PfGW456L13_3594 0.13 -0.2 4,046,392 + PfGW456L13_3594 0.28 -0.0 4,046,520 - PfGW456L13_3594 0.42 -0.1 4,046,782 + PfGW456L13_3594 0.71 -0.3 4,046,783 - PfGW456L13_3594 0.71 -0.6 4,046,936 + PfGW456L13_3594 0.87 +0.5 4,047,193 - -0.3 4,047,265 - +0.7 4,047,318 + PfGW456L13_3595 0.10 +2.7 4,047,319 - PfGW456L13_3595 0.10 +1.2 4,047,319 - PfGW456L13_3595 0.10 +0.5 4,047,552 + PfGW456L13_3595 0.28 +1.3 4,047,553 - PfGW456L13_3595 0.28 +0.9 4,047,789 + PfGW456L13_3595 0.45 +0.8 4,047,822 + PfGW456L13_3595 0.48 +0.5 4,047,822 + PfGW456L13_3595 0.48 +0.6 4,047,822 + PfGW456L13_3595 0.48 -0.3 4,047,822 + PfGW456L13_3595 0.48 -0.4 4,047,822 + PfGW456L13_3595 0.48 +0.2 4,047,822 + PfGW456L13_3595 0.48 -0.8 4,047,822 + PfGW456L13_3595 0.48 -0.5 4,047,822 + PfGW456L13_3595 0.48 +1.1 4,047,823 - PfGW456L13_3595 0.48 +1.1 4,047,823 - PfGW456L13_3595 0.48 -1.9 4,047,823 - PfGW456L13_3595 0.48 +0.7 4,047,823 - PfGW456L13_3595 0.48 +0.5 4,047,823 - PfGW456L13_3595 0.48 +0.8 4,047,992 + PfGW456L13_3595 0.60 -0.6 4,048,121 + PfGW456L13_3595 0.70 -0.7 4,048,122 - PfGW456L13_3595 0.70 +1.0 4,048,122 - PfGW456L13_3595 0.70 -1.1 4,048,125 + PfGW456L13_3595 0.70 +0.6 4,048,125 + PfGW456L13_3595 0.70 -0.2 4,048,126 - PfGW456L13_3595 0.70 +0.9 4,048,126 - PfGW456L13_3595 0.70 +1.1 4,048,230 + PfGW456L13_3595 0.78 -1.6 4,048,230 + PfGW456L13_3595 0.78 +0.1 4,048,231 - PfGW456L13_3595 0.78 -0.1 4,048,231 - PfGW456L13_3595 0.78 +0.4 4,048,231 - PfGW456L13_3595 0.78 +1.8 4,048,231 - PfGW456L13_3595 0.78 +0.6 4,048,272 + PfGW456L13_3595 0.81 +0.3 4,048,347 + PfGW456L13_3595 0.87 -0.5 4,048,348 - PfGW456L13_3595 0.87 +0.2 4,048,348 - PfGW456L13_3595 0.87 -1.2 4,048,348 - PfGW456L13_3595 0.87 -0.5 4,048,504 + -1.5 4,048,862 - PfGW456L13_3596 0.36 +0.2 4,048,876 + PfGW456L13_3596 0.38 +0.0 4,048,876 + PfGW456L13_3596 0.38 -0.3 4,048,876 + PfGW456L13_3596 0.38 +0.1 4,048,876 + -2.1 4,048,876 + PfGW456L13_3596 0.38 -0.3 4,048,877 - PfGW456L13_3596 0.38 -0.7 4,049,207 + PfGW456L13_3596 0.81 +1.4 4,049,208 - PfGW456L13_3596 0.81 -0.2 4,049,208 - PfGW456L13_3596 0.81 +0.4 4,049,208 - PfGW456L13_3596 0.81 -0.2 4,049,223 + PfGW456L13_3596 0.83 -1.2 4,049,223 + PfGW456L13_3596 0.83 -0.6 4,049,224 - PfGW456L13_3596 0.83 +0.5 4,049,415 - +0.1 4,049,487 - -0.1 4,049,487 - +0.4
Or see this region's nucleotide sequence