Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2685 and PfGW456L13_2686 are separated by 41 nucleotides PfGW456L13_2686 and PfGW456L13_2687 are separated by 404 nucleotides
PfGW456L13_2685 - Glycine hydroxymethyltransferase (EC 2.1.2.1) (from data) , at 2,984,036 to 2,985,292
_2685
PfGW456L13_2686 - Glycine cleavage system H protein, at 2,985,334 to 2,985,717
_2686
PfGW456L13_2687 - transcriptional regulator, MerR family, at 2,986,122 to 2,987,630
_2687
Position (kb)
2985
2986 Strain fitness (log2 ratio)
-2
-1
0
1 at 2984.433 kb on + strand, within PfGW456L13_2685 at 2984.433 kb on + strand, within PfGW456L13_2685 at 2984.434 kb on - strand, within PfGW456L13_2685 at 2984.703 kb on + strand, within PfGW456L13_2685 at 2984.703 kb on + strand, within PfGW456L13_2685 at 2984.704 kb on - strand, within PfGW456L13_2685 at 2984.761 kb on - strand, within PfGW456L13_2685 at 2984.826 kb on + strand, within PfGW456L13_2685 at 2984.826 kb on + strand, within PfGW456L13_2685 at 2984.874 kb on + strand, within PfGW456L13_2685 at 2984.875 kb on - strand, within PfGW456L13_2685 at 2984.875 kb on - strand, within PfGW456L13_2685 at 2985.025 kb on - strand, within PfGW456L13_2685 at 2985.071 kb on + strand, within PfGW456L13_2685 at 2985.071 kb on + strand, within PfGW456L13_2685 at 2985.129 kb on + strand, within PfGW456L13_2685 at 2985.130 kb on - strand, within PfGW456L13_2685 at 2985.130 kb on - strand, within PfGW456L13_2685 at 2985.180 kb on + strand at 2985.180 kb on + strand at 2985.180 kb on + strand at 2985.180 kb on + strand at 2985.181 kb on - strand at 2985.181 kb on - strand at 2985.181 kb on - strand at 2985.181 kb on - strand at 2985.181 kb on - strand at 2985.261 kb on + strand at 2985.369 kb on - strand at 2985.385 kb on + strand, within PfGW456L13_2686 at 2985.385 kb on + strand, within PfGW456L13_2686 at 2985.386 kb on - strand, within PfGW456L13_2686 at 2985.700 kb on - strand at 2986.144 kb on + strand at 2986.144 kb on + strand at 2986.145 kb on - strand at 2986.173 kb on - strand at 2986.217 kb on - strand at 2986.217 kb on - strand at 2986.226 kb on - strand at 2986.546 kb on - strand, within PfGW456L13_2687 at 2986.573 kb on + strand, within PfGW456L13_2687 at 2986.574 kb on - strand, within PfGW456L13_2687 at 2986.574 kb on - strand, within PfGW456L13_2687
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,984,433 + PfGW456L13_2685 0.32 -0.2 2,984,433 + PfGW456L13_2685 0.32 -0.7 2,984,434 - PfGW456L13_2685 0.32 -0.1 2,984,703 + PfGW456L13_2685 0.53 -0.2 2,984,703 + PfGW456L13_2685 0.53 +0.1 2,984,704 - PfGW456L13_2685 0.53 -0.7 2,984,761 - PfGW456L13_2685 0.58 -0.1 2,984,826 + PfGW456L13_2685 0.63 +0.5 2,984,826 + PfGW456L13_2685 0.63 -1.3 2,984,874 + PfGW456L13_2685 0.67 +0.1 2,984,875 - PfGW456L13_2685 0.67 -0.7 2,984,875 - PfGW456L13_2685 0.67 +0.8 2,985,025 - PfGW456L13_2685 0.79 +1.2 2,985,071 + PfGW456L13_2685 0.82 -1.3 2,985,071 + PfGW456L13_2685 0.82 +0.1 2,985,129 + PfGW456L13_2685 0.87 +0.8 2,985,130 - PfGW456L13_2685 0.87 +0.7 2,985,130 - PfGW456L13_2685 0.87 +1.0 2,985,180 + +0.3 2,985,180 + -0.0 2,985,180 + -0.1 2,985,180 + +0.3 2,985,181 - +0.2 2,985,181 - -1.6 2,985,181 - -2.2 2,985,181 - -0.2 2,985,181 - +0.5 2,985,261 + +0.3 2,985,369 - +0.3 2,985,385 + PfGW456L13_2686 0.13 +0.9 2,985,385 + PfGW456L13_2686 0.13 +0.6 2,985,386 - PfGW456L13_2686 0.14 +0.3 2,985,700 - +0.1 2,986,144 + -0.8 2,986,144 + +1.5 2,986,145 - +0.0 2,986,173 - -0.1 2,986,217 - -0.6 2,986,217 - +0.9 2,986,226 - +0.0 2,986,546 - PfGW456L13_2687 0.28 -0.5 2,986,573 + PfGW456L13_2687 0.30 -0.9 2,986,574 - PfGW456L13_2687 0.30 +0.6 2,986,574 - PfGW456L13_2687 0.30 +1.4
Or see this region's nucleotide sequence