Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2656 and PfGW456L13_2657 are separated by 114 nucleotides PfGW456L13_2657 and PfGW456L13_2658 are separated by 91 nucleotides
PfGW456L13_2656 - Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107), at 2,958,449 to 2,959,843
_2656
PfGW456L13_2657 - Glutathione S-transferase, omega (EC 2.5.1.18), at 2,959,958 to 2,960,959
_2657
PfGW456L13_2658 - Anthranilate phosphoribosyltransferase like (EC 2.4.2.18), at 2,961,051 to 2,962,052
_2658
Position (kb)
2959
2960
2961 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2959.103 kb on + strand, within PfGW456L13_2656 at 2959.183 kb on - strand, within PfGW456L13_2656 at 2959.187 kb on + strand, within PfGW456L13_2656 at 2959.187 kb on + strand, within PfGW456L13_2656 at 2959.187 kb on + strand, within PfGW456L13_2656 at 2959.187 kb on + strand, within PfGW456L13_2656 at 2959.187 kb on + strand, within PfGW456L13_2656 at 2959.187 kb on + strand, within PfGW456L13_2656 at 2959.188 kb on - strand, within PfGW456L13_2656 at 2959.188 kb on - strand, within PfGW456L13_2656 at 2959.188 kb on - strand, within PfGW456L13_2656 at 2959.592 kb on + strand, within PfGW456L13_2656 at 2959.592 kb on + strand, within PfGW456L13_2656 at 2959.592 kb on + strand, within PfGW456L13_2656 at 2959.592 kb on + strand, within PfGW456L13_2656 at 2959.593 kb on - strand, within PfGW456L13_2656 at 2959.593 kb on - strand, within PfGW456L13_2656 at 2959.593 kb on - strand, within PfGW456L13_2656 at 2959.593 kb on - strand, within PfGW456L13_2656 at 2959.593 kb on - strand, within PfGW456L13_2656 at 2959.593 kb on - strand, within PfGW456L13_2656 at 2959.593 kb on - strand, within PfGW456L13_2656 at 2960.077 kb on - strand, within PfGW456L13_2657 at 2960.077 kb on - strand, within PfGW456L13_2657 at 2960.077 kb on - strand, within PfGW456L13_2657 at 2960.079 kb on + strand, within PfGW456L13_2657 at 2960.080 kb on - strand, within PfGW456L13_2657 at 2960.133 kb on + strand, within PfGW456L13_2657 at 2960.133 kb on + strand, within PfGW456L13_2657 at 2960.134 kb on - strand, within PfGW456L13_2657 at 2960.134 kb on - strand, within PfGW456L13_2657 at 2960.134 kb on - strand, within PfGW456L13_2657 at 2960.206 kb on - strand, within PfGW456L13_2657 at 2960.206 kb on - strand, within PfGW456L13_2657 at 2960.206 kb on - strand, within PfGW456L13_2657 at 2960.208 kb on + strand, within PfGW456L13_2657 at 2960.209 kb on - strand, within PfGW456L13_2657 at 2960.209 kb on - strand, within PfGW456L13_2657 at 2960.209 kb on - strand, within PfGW456L13_2657 at 2960.266 kb on - strand, within PfGW456L13_2657 at 2960.281 kb on - strand, within PfGW456L13_2657 at 2960.298 kb on - strand, within PfGW456L13_2657 at 2960.349 kb on + strand, within PfGW456L13_2657 at 2960.349 kb on + strand, within PfGW456L13_2657 at 2960.350 kb on - strand, within PfGW456L13_2657 at 2960.350 kb on - strand, within PfGW456L13_2657 at 2960.350 kb on - strand, within PfGW456L13_2657 at 2960.366 kb on - strand, within PfGW456L13_2657 at 2960.382 kb on + strand, within PfGW456L13_2657 at 2960.383 kb on - strand, within PfGW456L13_2657 at 2960.586 kb on + strand, within PfGW456L13_2657 at 2960.586 kb on + strand, within PfGW456L13_2657 at 2960.587 kb on - strand, within PfGW456L13_2657 at 2960.587 kb on - strand, within PfGW456L13_2657 at 2960.587 kb on - strand, within PfGW456L13_2657 at 2960.607 kb on + strand, within PfGW456L13_2657 at 2960.607 kb on + strand, within PfGW456L13_2657 at 2960.608 kb on - strand, within PfGW456L13_2657 at 2960.608 kb on - strand, within PfGW456L13_2657 at 2960.790 kb on + strand, within PfGW456L13_2657 at 2960.790 kb on + strand, within PfGW456L13_2657 at 2960.790 kb on + strand, within PfGW456L13_2657 at 2960.790 kb on + strand, within PfGW456L13_2657 at 2960.790 kb on + strand, within PfGW456L13_2657 at 2960.791 kb on - strand, within PfGW456L13_2657 at 2960.791 kb on - strand, within PfGW456L13_2657 at 2960.791 kb on - strand, within PfGW456L13_2657 at 2960.800 kb on - strand, within PfGW456L13_2657 at 2960.800 kb on - strand, within PfGW456L13_2657 at 2960.920 kb on - strand at 2961.000 kb on + strand at 2961.000 kb on + strand at 2961.001 kb on - strand at 2961.052 kb on + strand at 2961.053 kb on - strand at 2961.298 kb on + strand, within PfGW456L13_2658 at 2961.299 kb on - strand, within PfGW456L13_2658 at 2961.366 kb on - strand, within PfGW456L13_2658 at 2961.602 kb on + strand, within PfGW456L13_2658 at 2961.602 kb on + strand, within PfGW456L13_2658 at 2961.646 kb on + strand, within PfGW456L13_2658 at 2961.646 kb on + strand, within PfGW456L13_2658 at 2961.646 kb on + strand, within PfGW456L13_2658 at 2961.647 kb on - strand, within PfGW456L13_2658 at 2961.647 kb on - strand, within PfGW456L13_2658 at 2961.730 kb on + strand, within PfGW456L13_2658 at 2961.730 kb on + strand, within PfGW456L13_2658 at 2961.730 kb on + strand, within PfGW456L13_2658 at 2961.731 kb on - strand, within PfGW456L13_2658 at 2961.731 kb on - strand, within PfGW456L13_2658 at 2961.731 kb on - strand, within PfGW456L13_2658 at 2961.760 kb on + strand, within PfGW456L13_2658 at 2961.760 kb on + strand, within PfGW456L13_2658 at 2961.760 kb on + strand, within PfGW456L13_2658 at 2961.761 kb on - strand, within PfGW456L13_2658 at 2961.761 kb on - strand, within PfGW456L13_2658 at 2961.761 kb on - strand, within PfGW456L13_2658
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,959,103 + PfGW456L13_2656 0.47 -2.4 2,959,183 - PfGW456L13_2656 0.53 +0.7 2,959,187 + PfGW456L13_2656 0.53 -4.7 2,959,187 + PfGW456L13_2656 0.53 -3.7 2,959,187 + PfGW456L13_2656 0.53 -3.0 2,959,187 + PfGW456L13_2656 0.53 -3.3 2,959,187 + PfGW456L13_2656 0.53 -0.3 2,959,187 + PfGW456L13_2656 0.53 -3.1 2,959,188 - PfGW456L13_2656 0.53 -1.3 2,959,188 - PfGW456L13_2656 0.53 -1.3 2,959,188 - PfGW456L13_2656 0.53 -2.7 2,959,592 + PfGW456L13_2656 0.82 -1.9 2,959,592 + PfGW456L13_2656 0.82 -3.4 2,959,592 + PfGW456L13_2656 0.82 -2.6 2,959,592 + PfGW456L13_2656 0.82 -1.9 2,959,593 - PfGW456L13_2656 0.82 -0.9 2,959,593 - PfGW456L13_2656 0.82 -1.9 2,959,593 - PfGW456L13_2656 0.82 -2.4 2,959,593 - PfGW456L13_2656 0.82 -2.7 2,959,593 - PfGW456L13_2656 0.82 -3.9 2,959,593 - PfGW456L13_2656 0.82 -2.3 2,959,593 - PfGW456L13_2656 0.82 -1.6 2,960,077 - PfGW456L13_2657 0.12 +0.1 2,960,077 - PfGW456L13_2657 0.12 +1.4 2,960,077 - PfGW456L13_2657 0.12 +0.3 2,960,079 + PfGW456L13_2657 0.12 +1.0 2,960,080 - PfGW456L13_2657 0.12 -0.5 2,960,133 + PfGW456L13_2657 0.17 +0.9 2,960,133 + PfGW456L13_2657 0.17 +1.0 2,960,134 - PfGW456L13_2657 0.18 -0.1 2,960,134 - PfGW456L13_2657 0.18 +0.3 2,960,134 - PfGW456L13_2657 0.18 +1.3 2,960,206 - PfGW456L13_2657 0.25 +0.9 2,960,206 - PfGW456L13_2657 0.25 -0.6 2,960,206 - PfGW456L13_2657 0.25 +0.7 2,960,208 + PfGW456L13_2657 0.25 +1.2 2,960,209 - PfGW456L13_2657 0.25 -0.5 2,960,209 - PfGW456L13_2657 0.25 -0.1 2,960,209 - PfGW456L13_2657 0.25 -0.1 2,960,266 - PfGW456L13_2657 0.31 +0.1 2,960,281 - PfGW456L13_2657 0.32 -1.3 2,960,298 - PfGW456L13_2657 0.34 -0.7 2,960,349 + PfGW456L13_2657 0.39 -0.1 2,960,349 + PfGW456L13_2657 0.39 -0.2 2,960,350 - PfGW456L13_2657 0.39 +0.6 2,960,350 - PfGW456L13_2657 0.39 -0.4 2,960,350 - PfGW456L13_2657 0.39 -0.1 2,960,366 - PfGW456L13_2657 0.41 +0.3 2,960,382 + PfGW456L13_2657 0.42 -0.2 2,960,383 - PfGW456L13_2657 0.42 -0.0 2,960,586 + PfGW456L13_2657 0.63 -0.4 2,960,586 + PfGW456L13_2657 0.63 +0.3 2,960,587 - PfGW456L13_2657 0.63 -0.6 2,960,587 - PfGW456L13_2657 0.63 -0.7 2,960,587 - PfGW456L13_2657 0.63 -0.2 2,960,607 + PfGW456L13_2657 0.65 -0.5 2,960,607 + PfGW456L13_2657 0.65 -0.4 2,960,608 - PfGW456L13_2657 0.65 -1.1 2,960,608 - PfGW456L13_2657 0.65 +2.1 2,960,790 + PfGW456L13_2657 0.83 +0.6 2,960,790 + PfGW456L13_2657 0.83 -1.2 2,960,790 + PfGW456L13_2657 0.83 -0.4 2,960,790 + PfGW456L13_2657 0.83 +0.7 2,960,790 + PfGW456L13_2657 0.83 -0.3 2,960,791 - PfGW456L13_2657 0.83 -1.3 2,960,791 - PfGW456L13_2657 0.83 +0.6 2,960,791 - PfGW456L13_2657 0.83 +1.8 2,960,800 - PfGW456L13_2657 0.84 -2.1 2,960,800 - PfGW456L13_2657 0.84 +0.1 2,960,920 - +0.3 2,961,000 + +0.4 2,961,000 + +0.1 2,961,001 - +0.5 2,961,052 + +0.6 2,961,053 - +0.3 2,961,298 + PfGW456L13_2658 0.25 -0.4 2,961,299 - PfGW456L13_2658 0.25 +0.1 2,961,366 - PfGW456L13_2658 0.31 -0.3 2,961,602 + PfGW456L13_2658 0.55 -1.1 2,961,602 + PfGW456L13_2658 0.55 +0.2 2,961,646 + PfGW456L13_2658 0.59 -0.9 2,961,646 + PfGW456L13_2658 0.59 -0.9 2,961,646 + PfGW456L13_2658 0.59 +0.6 2,961,647 - PfGW456L13_2658 0.59 +0.3 2,961,647 - PfGW456L13_2658 0.59 -0.7 2,961,730 + PfGW456L13_2658 0.68 +0.9 2,961,730 + PfGW456L13_2658 0.68 -0.2 2,961,730 + PfGW456L13_2658 0.68 +0.1 2,961,731 - PfGW456L13_2658 0.68 -1.0 2,961,731 - PfGW456L13_2658 0.68 -0.5 2,961,731 - PfGW456L13_2658 0.68 +0.3 2,961,760 + PfGW456L13_2658 0.71 -0.3 2,961,760 + PfGW456L13_2658 0.71 +0.7 2,961,760 + PfGW456L13_2658 0.71 +0.2 2,961,761 - PfGW456L13_2658 0.71 +1.3 2,961,761 - PfGW456L13_2658 0.71 -0.3 2,961,761 - PfGW456L13_2658 0.71 -0.1
Or see this region's nucleotide sequence