Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2647 and PfGW456L13_2648 are separated by 111 nucleotides PfGW456L13_2648 and PfGW456L13_2649 are separated by 15 nucleotides PfGW456L13_2649 and PfGW456L13_2650 are separated by 62 nucleotides
PfGW456L13_2647 - Translation initiation factor 1, at 2,949,028 to 2,949,246
_2647
PfGW456L13_2648 - Arginine-tRNA-protein transferase (EC 2.3.2.8), at 2,949,358 to 2,950,107
_2648
PfGW456L13_2649 - Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6), at 2,950,123 to 2,950,803
_2649
PfGW456L13_2650 - Thioredoxin reductase (EC 1.8.1.9), at 2,950,866 to 2,951,825
_2650
Position (kb)
2950
2951 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2949.360 kb on - strand at 2949.365 kb on - strand at 2949.365 kb on - strand at 2949.365 kb on - strand at 2949.420 kb on - strand at 2949.420 kb on - strand at 2949.420 kb on - strand at 2949.549 kb on - strand, within PfGW456L13_2648 at 2949.549 kb on - strand, within PfGW456L13_2648 at 2949.549 kb on - strand, within PfGW456L13_2648 at 2949.558 kb on - strand at 2949.558 kb on - strand, within PfGW456L13_2648 at 2949.633 kb on - strand, within PfGW456L13_2648 at 2949.695 kb on + strand, within PfGW456L13_2648 at 2949.696 kb on - strand, within PfGW456L13_2648 at 2949.728 kb on + strand, within PfGW456L13_2648 at 2949.728 kb on + strand, within PfGW456L13_2648 at 2949.728 kb on + strand, within PfGW456L13_2648 at 2949.728 kb on + strand, within PfGW456L13_2648 at 2949.738 kb on - strand, within PfGW456L13_2648 at 2949.749 kb on + strand, within PfGW456L13_2648 at 2949.749 kb on + strand, within PfGW456L13_2648 at 2949.749 kb on + strand, within PfGW456L13_2648 at 2949.749 kb on + strand, within PfGW456L13_2648 at 2949.750 kb on - strand, within PfGW456L13_2648 at 2949.750 kb on - strand, within PfGW456L13_2648 at 2949.781 kb on + strand, within PfGW456L13_2648 at 2949.782 kb on - strand, within PfGW456L13_2648 at 2949.782 kb on - strand, within PfGW456L13_2648 at 2949.782 kb on - strand, within PfGW456L13_2648 at 2949.944 kb on + strand, within PfGW456L13_2648 at 2949.945 kb on - strand, within PfGW456L13_2648 at 2949.945 kb on - strand, within PfGW456L13_2648 at 2949.945 kb on - strand, within PfGW456L13_2648 at 2950.010 kb on + strand, within PfGW456L13_2648 at 2950.011 kb on - strand, within PfGW456L13_2648 at 2950.037 kb on + strand at 2950.038 kb on - strand at 2950.038 kb on - strand at 2950.038 kb on - strand at 2950.038 kb on - strand at 2950.094 kb on + strand at 2950.094 kb on + strand at 2950.095 kb on - strand at 2950.095 kb on - strand at 2950.095 kb on - strand at 2950.095 kb on - strand at 2950.100 kb on + strand at 2950.100 kb on + strand at 2950.100 kb on + strand at 2950.101 kb on - strand at 2950.101 kb on - strand at 2950.172 kb on + strand at 2950.172 kb on + strand at 2950.172 kb on + strand at 2950.172 kb on + strand at 2950.172 kb on + strand at 2950.173 kb on - strand at 2950.195 kb on + strand, within PfGW456L13_2649 at 2950.253 kb on - strand, within PfGW456L13_2649 at 2950.442 kb on + strand, within PfGW456L13_2649 at 2950.547 kb on + strand, within PfGW456L13_2649 at 2950.548 kb on - strand, within PfGW456L13_2649 at 2950.561 kb on + strand, within PfGW456L13_2649 at 2950.779 kb on + strand at 2950.779 kb on + strand at 2950.779 kb on + strand at 2950.780 kb on - strand at 2950.780 kb on - strand at 2950.780 kb on - strand at 2950.780 kb on - strand at 2950.780 kb on - strand at 2950.780 kb on - strand at 2950.780 kb on - strand at 2950.789 kb on + strand at 2950.789 kb on + strand at 2950.789 kb on + strand at 2950.789 kb on + strand at 2950.789 kb on + strand at 2950.789 kb on + strand at 2950.789 kb on + strand at 2950.790 kb on - strand at 2950.790 kb on - strand at 2950.790 kb on - strand at 2950.790 kb on - strand at 2950.790 kb on - strand at 2950.854 kb on + strand at 2950.937 kb on + strand at 2950.937 kb on + strand at 2950.937 kb on + strand at 2950.937 kb on + strand at 2950.937 kb on + strand at 2950.938 kb on - strand at 2951.035 kb on - strand, within PfGW456L13_2650 at 2951.041 kb on + strand, within PfGW456L13_2650 at 2951.335 kb on + strand, within PfGW456L13_2650 at 2951.336 kb on - strand, within PfGW456L13_2650 at 2951.336 kb on - strand, within PfGW456L13_2650 at 2951.470 kb on + strand, within PfGW456L13_2650 at 2951.515 kb on + strand, within PfGW456L13_2650 at 2951.515 kb on + strand, within PfGW456L13_2650 at 2951.515 kb on + strand, within PfGW456L13_2650 at 2951.516 kb on - strand, within PfGW456L13_2650 at 2951.516 kb on - strand, within PfGW456L13_2650 at 2951.516 kb on - strand, within PfGW456L13_2650 at 2951.516 kb on - strand, within PfGW456L13_2650 at 2951.581 kb on + strand, within PfGW456L13_2650 at 2951.756 kb on - strand at 2951.770 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,949,360 - -1.6 2,949,365 - -0.8 2,949,365 - +0.3 2,949,365 - +0.3 2,949,420 - +1.6 2,949,420 - -0.7 2,949,420 - +0.2 2,949,549 - PfGW456L13_2648 0.25 +1.1 2,949,549 - PfGW456L13_2648 0.25 +0.2 2,949,549 - PfGW456L13_2648 0.25 -1.3 2,949,558 - +3.6 2,949,558 - PfGW456L13_2648 0.27 +0.9 2,949,633 - PfGW456L13_2648 0.37 +0.4 2,949,695 + PfGW456L13_2648 0.45 -1.0 2,949,696 - PfGW456L13_2648 0.45 -0.0 2,949,728 + PfGW456L13_2648 0.49 +0.2 2,949,728 + PfGW456L13_2648 0.49 -0.7 2,949,728 + PfGW456L13_2648 0.49 -0.2 2,949,728 + PfGW456L13_2648 0.49 -0.1 2,949,738 - PfGW456L13_2648 0.51 -0.6 2,949,749 + PfGW456L13_2648 0.52 -2.7 2,949,749 + PfGW456L13_2648 0.52 +0.3 2,949,749 + PfGW456L13_2648 0.52 -0.1 2,949,749 + PfGW456L13_2648 0.52 +0.4 2,949,750 - PfGW456L13_2648 0.52 +0.4 2,949,750 - PfGW456L13_2648 0.52 -0.1 2,949,781 + PfGW456L13_2648 0.56 +0.4 2,949,782 - PfGW456L13_2648 0.57 -1.0 2,949,782 - PfGW456L13_2648 0.57 -0.8 2,949,782 - PfGW456L13_2648 0.57 -1.6 2,949,944 + PfGW456L13_2648 0.78 -0.1 2,949,945 - PfGW456L13_2648 0.78 +0.3 2,949,945 - PfGW456L13_2648 0.78 -3.2 2,949,945 - PfGW456L13_2648 0.78 +0.3 2,950,010 + PfGW456L13_2648 0.87 -0.1 2,950,011 - PfGW456L13_2648 0.87 -0.4 2,950,037 + +0.3 2,950,038 - -0.6 2,950,038 - +0.6 2,950,038 - -0.3 2,950,038 - -0.4 2,950,094 + -1.7 2,950,094 + +0.9 2,950,095 - -1.6 2,950,095 - -1.6 2,950,095 - -1.7 2,950,095 - -0.7 2,950,100 + -0.9 2,950,100 + +1.1 2,950,100 + +1.0 2,950,101 - -0.4 2,950,101 - +0.3 2,950,172 + -1.2 2,950,172 + +0.3 2,950,172 + -0.1 2,950,172 + -1.1 2,950,172 + +0.3 2,950,173 - -0.0 2,950,195 + PfGW456L13_2649 0.11 -0.8 2,950,253 - PfGW456L13_2649 0.19 -1.1 2,950,442 + PfGW456L13_2649 0.47 -1.2 2,950,547 + PfGW456L13_2649 0.62 -0.5 2,950,548 - PfGW456L13_2649 0.62 -2.4 2,950,561 + PfGW456L13_2649 0.64 -0.8 2,950,779 + +1.1 2,950,779 + +0.8 2,950,779 + -0.6 2,950,780 - +0.7 2,950,780 - +0.6 2,950,780 - +0.7 2,950,780 - -2.4 2,950,780 - +0.1 2,950,780 - -0.4 2,950,780 - +0.0 2,950,789 + -0.0 2,950,789 + -0.3 2,950,789 + +0.7 2,950,789 + +1.3 2,950,789 + +0.9 2,950,789 + +0.2 2,950,789 + +0.3 2,950,790 - -1.0 2,950,790 - -0.7 2,950,790 - +1.6 2,950,790 - -0.4 2,950,790 - -1.1 2,950,854 + +0.9 2,950,937 + -0.6 2,950,937 + +0.6 2,950,937 + +0.3 2,950,937 + +1.3 2,950,937 + +1.1 2,950,938 - +1.8 2,951,035 - PfGW456L13_2650 0.18 -0.2 2,951,041 + PfGW456L13_2650 0.18 -0.5 2,951,335 + PfGW456L13_2650 0.49 +0.9 2,951,336 - PfGW456L13_2650 0.49 -1.2 2,951,336 - PfGW456L13_2650 0.49 -0.1 2,951,470 + PfGW456L13_2650 0.63 +0.8 2,951,515 + PfGW456L13_2650 0.68 -1.1 2,951,515 + PfGW456L13_2650 0.68 -0.5 2,951,515 + PfGW456L13_2650 0.68 -0.6 2,951,516 - PfGW456L13_2650 0.68 -0.0 2,951,516 - PfGW456L13_2650 0.68 +1.0 2,951,516 - PfGW456L13_2650 0.68 -0.9 2,951,516 - PfGW456L13_2650 0.68 +1.2 2,951,581 + PfGW456L13_2650 0.74 +0.4 2,951,756 - -0.4 2,951,770 + -1.3
Or see this region's nucleotide sequence