Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2174 and PfGW456L13_2175 are separated by 195 nucleotides PfGW456L13_2175 and PfGW456L13_2176 overlap by 1 nucleotides
PfGW456L13_2174 - DNA gyrase subunit A (EC 5.99.1.3), at 2,379,870 to 2,382,524
_2174
PfGW456L13_2175 - Phosphoserine aminotransferase (EC 2.6.1.52), at 2,382,720 to 2,383,811
_2175
PfGW456L13_2176 - Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51), at 2,383,811 to 2,384,905
_2176
Position (kb)
2382
2383
2384 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2382.522 kb on + strand at 2382.522 kb on + strand at 2382.522 kb on + strand at 2382.522 kb on + strand at 2382.522 kb on + strand at 2382.582 kb on + strand at 2382.597 kb on + strand at 2382.691 kb on + strand at 2382.691 kb on + strand at 2383.961 kb on + strand, within PfGW456L13_2176 at 2383.961 kb on + strand, within PfGW456L13_2176 at 2383.961 kb on + strand, within PfGW456L13_2176 at 2383.961 kb on + strand, within PfGW456L13_2176 at 2384.102 kb on + strand, within PfGW456L13_2176 at 2384.102 kb on + strand, within PfGW456L13_2176 at 2384.102 kb on + strand, within PfGW456L13_2176 at 2384.593 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,382,522 + -1.5 2,382,522 + -0.3 2,382,522 + -0.4 2,382,522 + -0.4 2,382,522 + +0.3 2,382,582 + +0.2 2,382,597 + +0.3 2,382,691 + +0.1 2,382,691 + -0.5 2,383,961 + PfGW456L13_2176 0.14 -2.5 2,383,961 + PfGW456L13_2176 0.14 -2.8 2,383,961 + PfGW456L13_2176 0.14 -3.8 2,383,961 + PfGW456L13_2176 0.14 -2.5 2,384,102 + PfGW456L13_2176 0.27 -2.8 2,384,102 + PfGW456L13_2176 0.27 -3.9 2,384,102 + PfGW456L13_2176 0.27 -3.2 2,384,593 + PfGW456L13_2176 0.71 -3.3 2,384,780 + PfGW456L13_2176 0.88 -3.6 2,384,780 + PfGW456L13_2176 0.88 -3.4 2,384,780 + PfGW456L13_2176 0.88 -4.8 2,384,780 + PfGW456L13_2176 0.88 -1.8 2,384,780 + PfGW456L13_2176 0.88 -2.3 2,384,780 + PfGW456L13_2176 0.88 -2.0 2,384,780 + PfGW456L13_2176 0.88 -2.8 2,384,780 + PfGW456L13_2176 0.88 -2.1 2,384,780 + PfGW456L13_2176 0.88 -3.0 2,384,780 + PfGW456L13_2176 0.88 -4.2 2,384,780 + PfGW456L13_2176 0.88 -0.5
Or see this region's nucleotide sequence