Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_19 and PfGW456L13_20 are separated by 236 nucleotides PfGW456L13_20 and PfGW456L13_21 are separated by 8 nucleotides PfGW456L13_21 and PfGW456L13_22 are separated by 90 nucleotides PfGW456L13_22 and PfGW456L13_23 are separated by 149 nucleotides
PfGW456L13_19 - Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase, at 24,353 to 25,366
_19
PfGW456L13_20 - FIG00956405: hypothetical protein, at 25,603 to 25,776
_20
PfGW456L13_21 - Multidrug resistance transporter, Bcr/CflA family, at 25,785 to 26,981
_21
PfGW456L13_22 - Copper chaperone, at 27,072 to 27,269
_22
PfGW456L13_23 - FIG00953575: hypothetical protein, at 27,419 to 27,802
_23
Position (kb) 25
26
27 Strain fitness (log2 ratio) -2
-1
0
1
2 at 24.851 kb on - strand, within PfGW456L13_19 at 25.006 kb on + strand, within PfGW456L13_19 at 25.163 kb on + strand, within PfGW456L13_19 at 25.163 kb on + strand, within PfGW456L13_19 at 25.163 kb on + strand, within PfGW456L13_19 at 25.163 kb on + strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.164 kb on - strand, within PfGW456L13_19 at 25.351 kb on - strand at 25.351 kb on - strand at 25.351 kb on - strand at 25.482 kb on - strand at 25.485 kb on + strand at 25.485 kb on + strand at 25.486 kb on - strand at 25.486 kb on - strand at 25.486 kb on - strand at 25.486 kb on - strand at 25.541 kb on + strand at 25.542 kb on - strand at 25.575 kb on + strand at 25.575 kb on + strand at 25.586 kb on - strand at 25.586 kb on - strand at 25.616 kb on + strand at 25.617 kb on - strand at 26.138 kb on - strand, within PfGW456L13_21 at 26.309 kb on - strand at 26.362 kb on - strand, within PfGW456L13_21 at 26.387 kb on - strand, within PfGW456L13_21 at 26.387 kb on - strand, within PfGW456L13_21 at 26.421 kb on + strand, within PfGW456L13_21 at 26.422 kb on - strand, within PfGW456L13_21 at 26.719 kb on + strand, within PfGW456L13_21 at 26.719 kb on + strand, within PfGW456L13_21 at 26.806 kb on + strand, within PfGW456L13_21 at 26.806 kb on + strand, within PfGW456L13_21 at 26.807 kb on - strand, within PfGW456L13_21 at 26.807 kb on - strand, within PfGW456L13_21 at 26.807 kb on - strand, within PfGW456L13_21 at 26.839 kb on + strand, within PfGW456L13_21 at 26.840 kb on - strand, within PfGW456L13_21 at 26.914 kb on + strand at 26.915 kb on - strand at 26.915 kb on - strand at 26.969 kb on + strand at 26.970 kb on - strand at 27.021 kb on + strand at 27.060 kb on + strand at 27.060 kb on + strand at 27.064 kb on + strand at 27.065 kb on - strand at 27.500 kb on + strand, within PfGW456L13_23 at 27.501 kb on - strand, within PfGW456L13_23 at 27.501 kb on - strand, within PfGW456L13_23 at 27.501 kb on - strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.563 kb on + strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.564 kb on - strand, within PfGW456L13_23 at 27.642 kb on + strand, within PfGW456L13_23 at 27.642 kb on + strand, within PfGW456L13_23 at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.773 kb on + strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.774 kb on - strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.807 kb on + strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.808 kb on - strand at 27.809 kb on + strand at 27.809 kb on + strand at 27.849 kb on - strand at 27.849 kb on - strand at 27.924 kb on + strand at 27.924 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.976 kb on + strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.977 kb on - strand at 27.979 kb on + strand at 27.980 kb on - strand at 27.980 kb on - strand at 27.980 kb on - strand at 27.980 kb on - strand at 27.980 kb on - strand at 27.980 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 24,851 - PfGW456L13_19 0.49 -0.7 25,006 + PfGW456L13_19 0.64 +0.6 25,163 + PfGW456L13_19 0.80 -0.4 25,163 + PfGW456L13_19 0.80 -0.7 25,163 + PfGW456L13_19 0.80 -1.8 25,163 + PfGW456L13_19 0.80 -0.4 25,164 - PfGW456L13_19 0.80 +0.6 25,164 - PfGW456L13_19 0.80 +0.5 25,164 - PfGW456L13_19 0.80 -1.1 25,164 - PfGW456L13_19 0.80 +0.1 25,164 - PfGW456L13_19 0.80 +0.2 25,164 - PfGW456L13_19 0.80 -0.2 25,164 - PfGW456L13_19 0.80 +0.0 25,164 - PfGW456L13_19 0.80 -0.1 25,164 - PfGW456L13_19 0.80 +0.2 25,164 - PfGW456L13_19 0.80 +0.1 25,351 - +0.4 25,351 - +0.6 25,351 - +1.1 25,482 - +0.8 25,485 + -1.2 25,485 + -0.9 25,486 - -0.1 25,486 - +0.3 25,486 - -0.5 25,486 - +0.4 25,541 + -0.1 25,542 - -0.3 25,575 + +0.5 25,575 + +0.3 25,586 - +0.1 25,586 - -0.1 25,616 + +0.4 25,617 - +0.4 26,138 - PfGW456L13_21 0.29 +0.5 26,309 - +0.6 26,362 - PfGW456L13_21 0.48 -0.6 26,387 - PfGW456L13_21 0.50 -1.1 26,387 - PfGW456L13_21 0.50 +0.7 26,421 + PfGW456L13_21 0.53 +1.5 26,422 - PfGW456L13_21 0.53 +1.0 26,719 + PfGW456L13_21 0.78 +1.2 26,719 + PfGW456L13_21 0.78 +0.2 26,806 + PfGW456L13_21 0.85 +1.2 26,806 + PfGW456L13_21 0.85 +0.1 26,807 - PfGW456L13_21 0.85 -1.8 26,807 - PfGW456L13_21 0.85 -0.9 26,807 - PfGW456L13_21 0.85 -1.3 26,839 + PfGW456L13_21 0.88 -0.6 26,840 - PfGW456L13_21 0.88 +0.3 26,914 + -0.2 26,915 - -0.3 26,915 - -2.2 26,969 + +1.1 26,970 - +0.4 27,021 + +0.1 27,060 + +1.5 27,060 + -0.0 27,064 + +0.3 27,065 - -0.1 27,500 + PfGW456L13_23 0.21 -0.2 27,501 - PfGW456L13_23 0.21 +0.1 27,501 - PfGW456L13_23 0.21 +0.3 27,501 - PfGW456L13_23 0.21 -0.1 27,563 + PfGW456L13_23 0.38 +1.0 27,563 + PfGW456L13_23 0.38 -0.7 27,563 + PfGW456L13_23 0.38 -0.6 27,563 + PfGW456L13_23 0.38 -0.2 27,563 + PfGW456L13_23 0.38 -0.0 27,563 + PfGW456L13_23 0.38 -0.3 27,563 + PfGW456L13_23 0.38 -0.7 27,563 + PfGW456L13_23 0.38 +0.2 27,564 - PfGW456L13_23 0.38 -0.2 27,564 - PfGW456L13_23 0.38 -0.2 27,564 - PfGW456L13_23 0.38 +1.8 27,564 - PfGW456L13_23 0.38 +0.5 27,564 - PfGW456L13_23 0.38 +0.4 27,642 + PfGW456L13_23 0.58 +0.4 27,642 + PfGW456L13_23 0.58 +0.6 27,773 + -0.2 27,773 + -0.5 27,773 + -0.8 27,773 + +1.0 27,773 + +0.1 27,773 + -0.1 27,773 + -0.8 27,773 + +0.6 27,773 + -1.1 27,773 + -0.3 27,774 - -0.3 27,774 - -1.7 27,774 - -0.5 27,774 - -0.6 27,774 - -0.7 27,774 - +1.7 27,774 - -1.9 27,774 - +1.3 27,774 - -0.7 27,774 - -1.3 27,807 + +0.6 27,807 + -0.7 27,807 + +1.2 27,807 + -0.8 27,807 + +1.1 27,807 + -0.5 27,807 + -1.0 27,807 + -1.2 27,807 + +0.8 27,807 + -0.9 27,807 + +0.5 27,807 + -2.0 27,807 + +1.1 27,807 + +0.3 27,807 + +1.4 27,807 + +0.0 27,807 + +0.4 27,807 + +0.4 27,807 + +0.6 27,807 + -0.5 27,807 + +0.5 27,807 + -0.5 27,807 + +0.4 27,807 + -1.2 27,807 + +0.5 27,807 + -1.3 27,807 + +0.0 27,807 + +0.2 27,808 - -0.0 27,808 - +0.8 27,808 - -1.5 27,808 - +0.9 27,808 - +0.6 27,808 - -0.4 27,808 - +0.9 27,808 - +0.7 27,808 - +0.2 27,808 - -0.2 27,808 - -2.2 27,808 - -0.0 27,808 - +0.4 27,808 - +1.2 27,808 - +0.1 27,808 - +1.4 27,808 - +0.9 27,808 - +0.4 27,808 - +0.3 27,808 - +0.8 27,808 - -1.0 27,808 - -0.3 27,808 - -0.1 27,808 - +2.5 27,808 - +0.4 27,808 - +0.7 27,808 - +0.4 27,808 - -0.7 27,808 - +0.4 27,808 - -0.2 27,808 - +0.4 27,808 - -0.7 27,808 - +0.5 27,808 - -0.2 27,808 - +0.8 27,809 + +0.1 27,809 + -0.1 27,849 - +0.0 27,849 - -1.1 27,924 + +0.8 27,924 + +0.7 27,976 + -0.6 27,976 + +0.2 27,976 + +0.2 27,976 + -1.0 27,976 + -1.4 27,976 + -0.7 27,976 + +0.4 27,977 - +0.3 27,977 - +0.8 27,977 - +0.1 27,977 - +0.5 27,977 - +0.2 27,977 - +0.0 27,979 + -1.9 27,980 - +0.9 27,980 - -0.2 27,980 - -0.7 27,980 - +1.3 27,980 - +0.5 27,980 - -1.8
Or see this region's nucleotide sequence