Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1616 and PfGW456L13_1617 are separated by 33 nucleotides PfGW456L13_1617 and PfGW456L13_1618 are separated by 92 nucleotides PfGW456L13_1618 and PfGW456L13_1619 are separated by 270 nucleotides
PfGW456L13_1616 - Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52), at 1,774,588 to 1,775,586
_1616
PfGW456L13_1617 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 1,775,620 to 1,776,585
_1617
PfGW456L13_1618 - L-lysine permease, at 1,776,678 to 1,777,307
_1618
PfGW456L13_1619 - Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-), at 1,777,578 to 1,779,260
_1619
Position (kb)
1775
1776
1777 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1775.129 kb on + strand, within PfGW456L13_1616 at 1775.129 kb on + strand, within PfGW456L13_1616 at 1775.129 kb on + strand, within PfGW456L13_1616 at 1775.129 kb on + strand, within PfGW456L13_1616 at 1775.129 kb on + strand, within PfGW456L13_1616 at 1775.130 kb on - strand, within PfGW456L13_1616 at 1775.130 kb on - strand, within PfGW456L13_1616 at 1775.130 kb on - strand, within PfGW456L13_1616 at 1775.292 kb on - strand, within PfGW456L13_1616 at 1775.336 kb on + strand, within PfGW456L13_1616 at 1775.336 kb on + strand, within PfGW456L13_1616 at 1775.336 kb on + strand, within PfGW456L13_1616 at 1775.337 kb on - strand, within PfGW456L13_1616 at 1775.545 kb on + strand at 1775.545 kb on + strand at 1775.546 kb on - strand at 1775.546 kb on - strand at 1775.566 kb on + strand at 1775.566 kb on + strand at 1775.566 kb on + strand at 1775.566 kb on + strand at 1775.566 kb on + strand at 1775.566 kb on + strand at 1775.567 kb on - strand at 1775.567 kb on - strand at 1775.567 kb on - strand at 1775.567 kb on - strand at 1775.567 kb on - strand at 1775.586 kb on + strand at 1775.586 kb on + strand at 1775.654 kb on + strand at 1775.654 kb on + strand at 1775.655 kb on - strand at 1775.655 kb on - strand at 1776.001 kb on + strand, within PfGW456L13_1617 at 1776.001 kb on + strand, within PfGW456L13_1617 at 1776.001 kb on + strand, within PfGW456L13_1617 at 1776.001 kb on + strand, within PfGW456L13_1617 at 1776.001 kb on + strand, within PfGW456L13_1617 at 1776.001 kb on + strand, within PfGW456L13_1617 at 1776.001 kb on + strand, within PfGW456L13_1617 at 1776.002 kb on - strand, within PfGW456L13_1617 at 1776.002 kb on - strand, within PfGW456L13_1617 at 1776.061 kb on - strand, within PfGW456L13_1617 at 1776.213 kb on - strand, within PfGW456L13_1617 at 1776.563 kb on - strand at 1776.592 kb on + strand at 1776.592 kb on + strand at 1776.593 kb on - strand at 1776.620 kb on - strand at 1776.634 kb on - strand at 1776.645 kb on + strand at 1776.649 kb on + strand at 1776.650 kb on - strand at 1776.650 kb on - strand at 1776.650 kb on - strand at 1776.653 kb on + strand at 1776.653 kb on + strand at 1776.653 kb on + strand at 1776.653 kb on + strand at 1776.653 kb on + strand at 1776.654 kb on - strand at 1776.654 kb on - strand at 1776.681 kb on + strand at 1776.681 kb on + strand at 1776.681 kb on + strand at 1776.682 kb on - strand at 1776.682 kb on - strand at 1776.682 kb on - strand at 1776.922 kb on - strand, within PfGW456L13_1618 at 1776.930 kb on + strand, within PfGW456L13_1618 at 1776.930 kb on + strand, within PfGW456L13_1618 at 1776.930 kb on + strand, within PfGW456L13_1618 at 1776.930 kb on + strand, within PfGW456L13_1618 at 1776.930 kb on + strand, within PfGW456L13_1618 at 1776.930 kb on + strand, within PfGW456L13_1618 at 1776.931 kb on - strand, within PfGW456L13_1618 at 1776.931 kb on - strand, within PfGW456L13_1618 at 1776.931 kb on - strand, within PfGW456L13_1618 at 1776.931 kb on - strand, within PfGW456L13_1618 at 1776.939 kb on + strand, within PfGW456L13_1618 at 1776.940 kb on - strand, within PfGW456L13_1618 at 1776.940 kb on - strand, within PfGW456L13_1618 at 1777.097 kb on - strand, within PfGW456L13_1618 at 1777.293 kb on - strand at 1777.313 kb on + strand at 1777.313 kb on + strand at 1777.313 kb on + strand at 1777.313 kb on + strand at 1777.313 kb on + strand at 1777.313 kb on + strand at 1777.313 kb on + strand at 1777.313 kb on + strand at 1777.313 kb on + strand at 1777.314 kb on - strand at 1777.314 kb on - strand at 1777.314 kb on - strand at 1777.314 kb on - strand at 1777.314 kb on - strand at 1777.314 kb on - strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.317 kb on + strand at 1777.318 kb on - strand at 1777.318 kb on - strand at 1777.318 kb on - strand at 1777.318 kb on - strand at 1777.318 kb on - strand at 1777.318 kb on - strand at 1777.326 kb on - strand at 1777.326 kb on - strand at 1777.365 kb on + strand at 1777.365 kb on + strand at 1777.365 kb on + strand at 1777.365 kb on + strand at 1777.366 kb on - strand at 1777.429 kb on + strand at 1777.429 kb on + strand at 1777.429 kb on + strand at 1777.430 kb on - strand at 1777.527 kb on + strand at 1777.527 kb on + strand at 1777.527 kb on + strand at 1777.527 kb on + strand at 1777.528 kb on - strand at 1777.528 kb on - strand at 1777.528 kb on - strand at 1777.528 kb on - strand at 1777.528 kb on - strand at 1777.528 kb on - strand at 1777.536 kb on + strand at 1777.536 kb on + strand at 1777.566 kb on - strand at 1777.566 kb on - strand at 1777.574 kb on + strand at 1777.574 kb on + strand at 1777.574 kb on + strand at 1777.574 kb on + strand at 1777.574 kb on + strand at 1777.574 kb on + strand at 1777.575 kb on - strand at 1777.575 kb on - strand at 1777.575 kb on - strand at 1777.575 kb on - strand at 1777.577 kb on + strand at 1777.577 kb on + strand at 1777.577 kb on + strand at 1777.577 kb on + strand at 1777.577 kb on + strand at 1777.577 kb on + strand at 1777.577 kb on + strand at 1777.577 kb on + strand at 1777.578 kb on - strand at 1777.578 kb on - strand at 1777.578 kb on - strand at 1777.578 kb on - strand at 1777.578 kb on - strand at 1777.578 kb on - strand at 1777.578 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,775,129 + PfGW456L13_1616 0.54 -0.3 1,775,129 + PfGW456L13_1616 0.54 +0.8 1,775,129 + PfGW456L13_1616 0.54 -0.6 1,775,129 + PfGW456L13_1616 0.54 +0.4 1,775,129 + PfGW456L13_1616 0.54 +0.9 1,775,130 - PfGW456L13_1616 0.54 +0.0 1,775,130 - PfGW456L13_1616 0.54 -0.3 1,775,130 - PfGW456L13_1616 0.54 -0.3 1,775,292 - PfGW456L13_1616 0.70 -0.4 1,775,336 + PfGW456L13_1616 0.75 +0.4 1,775,336 + PfGW456L13_1616 0.75 -0.8 1,775,336 + PfGW456L13_1616 0.75 -0.8 1,775,337 - PfGW456L13_1616 0.75 -0.1 1,775,545 + +0.5 1,775,545 + +0.6 1,775,546 - +0.3 1,775,546 - -0.1 1,775,566 + +0.5 1,775,566 + -0.6 1,775,566 + -2.3 1,775,566 + +0.2 1,775,566 + -0.6 1,775,566 + +0.2 1,775,567 - -0.7 1,775,567 - +0.5 1,775,567 - -0.0 1,775,567 - +0.5 1,775,567 - -0.4 1,775,586 + +0.3 1,775,586 + -0.5 1,775,654 + -0.8 1,775,654 + +0.9 1,775,655 - +0.7 1,775,655 - -0.4 1,776,001 + PfGW456L13_1617 0.39 +0.4 1,776,001 + PfGW456L13_1617 0.39 +0.6 1,776,001 + PfGW456L13_1617 0.39 +1.0 1,776,001 + PfGW456L13_1617 0.39 -0.0 1,776,001 + PfGW456L13_1617 0.39 +0.2 1,776,001 + PfGW456L13_1617 0.39 +0.8 1,776,001 + PfGW456L13_1617 0.39 -0.6 1,776,002 - PfGW456L13_1617 0.40 -0.3 1,776,002 - PfGW456L13_1617 0.40 +1.4 1,776,061 - PfGW456L13_1617 0.46 -0.5 1,776,213 - PfGW456L13_1617 0.61 +0.3 1,776,563 - -0.2 1,776,592 + +0.5 1,776,592 + -0.0 1,776,593 - +0.2 1,776,620 - +1.2 1,776,634 - +2.5 1,776,645 + +0.2 1,776,649 + +1.2 1,776,650 - -1.1 1,776,650 - -0.3 1,776,650 - -0.8 1,776,653 + -0.3 1,776,653 + -0.7 1,776,653 + +0.6 1,776,653 + +0.1 1,776,653 + +0.5 1,776,654 - -0.1 1,776,654 - -0.6 1,776,681 + -1.1 1,776,681 + -0.5 1,776,681 + -1.0 1,776,682 - +0.3 1,776,682 - +0.6 1,776,682 - +0.0 1,776,922 - PfGW456L13_1618 0.39 +0.6 1,776,930 + PfGW456L13_1618 0.40 -0.5 1,776,930 + PfGW456L13_1618 0.40 +0.5 1,776,930 + PfGW456L13_1618 0.40 -0.1 1,776,930 + PfGW456L13_1618 0.40 -0.5 1,776,930 + PfGW456L13_1618 0.40 +0.5 1,776,930 + PfGW456L13_1618 0.40 +0.1 1,776,931 - PfGW456L13_1618 0.40 +0.6 1,776,931 - PfGW456L13_1618 0.40 -0.8 1,776,931 - PfGW456L13_1618 0.40 -2.1 1,776,931 - PfGW456L13_1618 0.40 +0.3 1,776,939 + PfGW456L13_1618 0.41 -1.6 1,776,940 - PfGW456L13_1618 0.42 +0.5 1,776,940 - PfGW456L13_1618 0.42 -1.2 1,777,097 - PfGW456L13_1618 0.67 -1.3 1,777,293 - +1.0 1,777,313 + -0.4 1,777,313 + -0.7 1,777,313 + +0.2 1,777,313 + +0.3 1,777,313 + -0.3 1,777,313 + +0.7 1,777,313 + +0.4 1,777,313 + -1.5 1,777,313 + +0.6 1,777,314 - -0.1 1,777,314 - -0.7 1,777,314 - +0.2 1,777,314 - -0.1 1,777,314 - -0.2 1,777,314 - -0.4 1,777,317 + -0.8 1,777,317 + -1.1 1,777,317 + +1.3 1,777,317 + -1.0 1,777,317 + -2.0 1,777,317 + -0.7 1,777,317 + -0.9 1,777,317 + +0.5 1,777,317 + +0.6 1,777,317 + -0.9 1,777,317 + +0.4 1,777,318 - +0.7 1,777,318 - -0.4 1,777,318 - +0.9 1,777,318 - -0.1 1,777,318 - -0.8 1,777,318 - +0.5 1,777,326 - +0.7 1,777,326 - -0.1 1,777,365 + +0.3 1,777,365 + -1.4 1,777,365 + +0.7 1,777,365 + +0.6 1,777,366 - -0.6 1,777,429 + +1.1 1,777,429 + +0.5 1,777,429 + +0.2 1,777,430 - +0.0 1,777,527 + +0.3 1,777,527 + -1.8 1,777,527 + -0.1 1,777,527 + +0.1 1,777,528 - +0.2 1,777,528 - +0.9 1,777,528 - +0.2 1,777,528 - +0.4 1,777,528 - +0.0 1,777,528 - +1.2 1,777,536 + -0.2 1,777,536 + -0.2 1,777,566 - -0.4 1,777,566 - -0.6 1,777,574 + +0.7 1,777,574 + -0.4 1,777,574 + -1.1 1,777,574 + -0.3 1,777,574 + -0.5 1,777,574 + +0.5 1,777,575 - +0.3 1,777,575 - +0.2 1,777,575 - +0.6 1,777,575 - -0.1 1,777,577 + -1.3 1,777,577 + +0.1 1,777,577 + -0.6 1,777,577 + -1.1 1,777,577 + -1.2 1,777,577 + +0.1 1,777,577 + -0.5 1,777,577 + -0.6 1,777,578 - +0.7 1,777,578 - -0.4 1,777,578 - -1.3 1,777,578 - +0.2 1,777,578 - -0.6 1,777,578 - -0.6 1,777,578 - -1.0
Or see this region's nucleotide sequence