Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1360 and PfGW456L13_1361 overlap by 8 nucleotides PfGW456L13_1361 and PfGW456L13_1362 are separated by 17 nucleotides
PfGW456L13_1360 - Penicillin-binding protein 2 (PBP-2), at 1,503,710 to 1,505,605
_1360
PfGW456L13_1361 - Rod shape-determining protein RodA, at 1,505,598 to 1,506,740
_1361
PfGW456L13_1362 - Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-), at 1,506,758 to 1,507,768
_1362
Position (kb)
1505
1506
1507 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1505.561 kb on + strand at 1505.572 kb on + strand at 1505.572 kb on + strand at 1505.603 kb on + strand at 1505.603 kb on + strand at 1506.742 kb on + strand at 1506.743 kb on - strand at 1506.743 kb on - strand at 1506.743 kb on - strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.765 kb on + strand at 1506.766 kb on - strand at 1506.766 kb on - strand at 1506.766 kb on - strand at 1506.766 kb on - strand at 1506.810 kb on + strand at 1506.811 kb on - strand at 1506.811 kb on - strand at 1506.851 kb on + strand at 1507.045 kb on - strand, within PfGW456L13_1362 at 1507.106 kb on + strand, within PfGW456L13_1362 at 1507.106 kb on + strand, within PfGW456L13_1362 at 1507.165 kb on + strand, within PfGW456L13_1362 at 1507.166 kb on - strand, within PfGW456L13_1362 at 1507.313 kb on + strand, within PfGW456L13_1362 at 1507.313 kb on + strand, within PfGW456L13_1362 at 1507.313 kb on + strand, within PfGW456L13_1362 at 1507.313 kb on + strand, within PfGW456L13_1362 at 1507.313 kb on + strand, within PfGW456L13_1362 at 1507.314 kb on - strand, within PfGW456L13_1362 at 1507.364 kb on + strand, within PfGW456L13_1362 at 1507.365 kb on - strand, within PfGW456L13_1362 at 1507.394 kb on - strand, within PfGW456L13_1362 at 1507.443 kb on - strand, within PfGW456L13_1362 at 1507.443 kb on - strand, within PfGW456L13_1362 at 1507.479 kb on + strand, within PfGW456L13_1362 at 1507.606 kb on + strand, within PfGW456L13_1362 at 1507.606 kb on + strand, within PfGW456L13_1362 at 1507.606 kb on + strand, within PfGW456L13_1362 at 1507.606 kb on + strand, within PfGW456L13_1362 at 1507.606 kb on + strand, within PfGW456L13_1362 at 1507.606 kb on + strand, within PfGW456L13_1362 at 1507.606 kb on + strand, within PfGW456L13_1362 at 1507.606 kb on + strand, within PfGW456L13_1362 at 1507.693 kb on + strand at 1507.693 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.709 kb on + strand at 1507.722 kb on + strand at 1507.722 kb on + strand at 1507.722 kb on + strand at 1507.722 kb on + strand at 1507.722 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,505,561 + -1.0 1,505,572 + -2.7 1,505,572 + -0.1 1,505,603 + +1.9 1,505,603 + -1.0 1,506,742 + +0.0 1,506,743 - +0.9 1,506,743 - -1.9 1,506,743 - +0.4 1,506,765 + -0.5 1,506,765 + -0.0 1,506,765 + -0.2 1,506,765 + +0.5 1,506,765 + -0.2 1,506,765 + -0.3 1,506,765 + -0.2 1,506,765 + +0.2 1,506,765 + -1.1 1,506,765 + -0.9 1,506,766 - -0.5 1,506,766 - +0.0 1,506,766 - -0.1 1,506,766 - +1.4 1,506,810 + +0.3 1,506,811 - -0.3 1,506,811 - +0.2 1,506,851 + -1.9 1,507,045 - PfGW456L13_1362 0.28 -2.4 1,507,106 + PfGW456L13_1362 0.34 -1.9 1,507,106 + PfGW456L13_1362 0.34 -0.1 1,507,165 + PfGW456L13_1362 0.40 -0.2 1,507,166 - PfGW456L13_1362 0.40 +0.3 1,507,313 + PfGW456L13_1362 0.55 -1.1 1,507,313 + PfGW456L13_1362 0.55 -0.2 1,507,313 + PfGW456L13_1362 0.55 -1.7 1,507,313 + PfGW456L13_1362 0.55 +0.7 1,507,313 + PfGW456L13_1362 0.55 +0.1 1,507,314 - PfGW456L13_1362 0.55 -1.1 1,507,364 + PfGW456L13_1362 0.60 +0.5 1,507,365 - PfGW456L13_1362 0.60 -0.6 1,507,394 - PfGW456L13_1362 0.63 -0.1 1,507,443 - PfGW456L13_1362 0.68 +0.9 1,507,443 - PfGW456L13_1362 0.68 -1.1 1,507,479 + PfGW456L13_1362 0.71 -0.4 1,507,606 + PfGW456L13_1362 0.84 -0.0 1,507,606 + PfGW456L13_1362 0.84 -0.5 1,507,606 + PfGW456L13_1362 0.84 +1.0 1,507,606 + PfGW456L13_1362 0.84 -0.5 1,507,606 + PfGW456L13_1362 0.84 -0.5 1,507,606 + PfGW456L13_1362 0.84 +1.0 1,507,606 + PfGW456L13_1362 0.84 -0.5 1,507,606 + PfGW456L13_1362 0.84 -0.7 1,507,693 + +0.3 1,507,693 + +0.0 1,507,709 + +0.0 1,507,709 + -0.5 1,507,709 + -0.5 1,507,709 + -0.3 1,507,709 + +0.3 1,507,709 + +0.6 1,507,709 + +0.6 1,507,709 + +0.1 1,507,709 + +0.2 1,507,709 + -0.1 1,507,709 + -0.8 1,507,709 + -0.1 1,507,722 + -1.0 1,507,722 + +0.7 1,507,722 + -0.3 1,507,722 + +0.7 1,507,722 + -0.7
Or see this region's nucleotide sequence