Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2099 and PfGW456L13_2100 are separated by 54 nucleotides PfGW456L13_2100 and PfGW456L13_2101 are separated by 105 nucleotides PfGW456L13_2101 and PfGW456L13_2102 are separated by 13 nucleotides PfGW456L13_2102 and PfGW456L13_2103 are separated by 34 nucleotides
PfGW456L13_2099 - Periplasmic serine proteases (ClpP class), at 2,306,127 to 2,307,116
_2099
PfGW456L13_2100 - FIG146278: Maf/YceF/YhdE family protein, at 2,307,171 to 2,307,749
_2100
PfGW456L13_2101 - COG1399 protein, clustered with ribosomal protein L32p, at 2,307,855 to 2,308,382
_2101
PfGW456L13_2102 - LSU ribosomal protein L32p, at 2,308,396 to 2,308,578
_2102
PfGW456L13_2103 - Phosphate:acyl-ACP acyltransferase PlsX, at 2,308,613 to 2,309,593
_2103
Position (kb)
2307
2308
2309 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2307.095 kb on + strand at 2307.163 kb on - strand at 2307.317 kb on - strand, within PfGW456L13_2100 at 2307.337 kb on + strand, within PfGW456L13_2100 at 2307.337 kb on + strand, within PfGW456L13_2100 at 2307.375 kb on + strand, within PfGW456L13_2100 at 2307.375 kb on + strand, within PfGW456L13_2100 at 2307.375 kb on + strand, within PfGW456L13_2100 at 2307.376 kb on - strand, within PfGW456L13_2100 at 2307.376 kb on - strand, within PfGW456L13_2100 at 2307.555 kb on + strand, within PfGW456L13_2100 at 2307.738 kb on + strand at 2307.738 kb on + strand at 2307.761 kb on + strand at 2307.779 kb on + strand at 2307.780 kb on - strand at 2308.576 kb on + strand at 2309.100 kb on + strand, within PfGW456L13_2103 at 2309.207 kb on + strand, within PfGW456L13_2103 at 2309.207 kb on + strand, within PfGW456L13_2103 at 2309.207 kb on + strand, within PfGW456L13_2103 at 2309.207 kb on + strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.238 kb on - strand, within PfGW456L13_2103
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,307,095 + -0.5 2,307,163 - +0.1 2,307,317 - PfGW456L13_2100 0.25 +0.2 2,307,337 + PfGW456L13_2100 0.29 +0.8 2,307,337 + PfGW456L13_2100 0.29 -0.2 2,307,375 + PfGW456L13_2100 0.35 -0.9 2,307,375 + PfGW456L13_2100 0.35 -0.2 2,307,375 + PfGW456L13_2100 0.35 +0.9 2,307,376 - PfGW456L13_2100 0.35 +0.7 2,307,376 - PfGW456L13_2100 0.35 +0.2 2,307,555 + PfGW456L13_2100 0.66 +0.2 2,307,738 + +0.2 2,307,738 + -1.1 2,307,761 + +0.5 2,307,779 + +0.4 2,307,780 - -1.3 2,308,576 + +0.5 2,309,100 + PfGW456L13_2103 0.50 -3.6 2,309,207 + PfGW456L13_2103 0.61 -2.2 2,309,207 + PfGW456L13_2103 0.61 -1.1 2,309,207 + PfGW456L13_2103 0.61 -4.9 2,309,207 + PfGW456L13_2103 0.61 -3.8 2,309,208 - PfGW456L13_2103 0.61 -4.1 2,309,208 - PfGW456L13_2103 0.61 +0.8 2,309,208 - PfGW456L13_2103 0.61 -3.2 2,309,208 - PfGW456L13_2103 0.61 -2.2 2,309,208 - PfGW456L13_2103 0.61 -4.1 2,309,208 - PfGW456L13_2103 0.61 -0.8 2,309,238 - PfGW456L13_2103 0.64 -3.0
Or see this region's nucleotide sequence