Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1875

Experiment: L-Glutamic (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamic (N)
2,062,544	+		PfGW456L13_1874	0.53	+0.6
2,062,545	-		PfGW456L13_1874	0.53	+0.1
2,062,589	+		PfGW456L13_1874	0.57	-0.1
2,062,589	+		PfGW456L13_1874	0.57	-0.7
2,062,589	+		PfGW456L13_1874	0.57	-1.4
2,062,589	+		PfGW456L13_1874	0.57	-0.8
2,062,589	+		PfGW456L13_1874	0.57	+0.2
2,062,590	-		PfGW456L13_1874	0.57	+0.0
2,062,590	-		PfGW456L13_1874	0.57	+0.5
2,062,590	-		PfGW456L13_1874	0.57	-0.7
2,062,590	-		PfGW456L13_1874	0.57	+0.9
2,062,590	-		PfGW456L13_1874	0.57	-0.4
2,062,616	+		PfGW456L13_1874	0.59	-0.4
2,063,109	-				-1.2
2,063,109	-				-0.1
2,063,131	+				-0.1
2,063,131	+				+0.1
2,063,131	+				+0.4
2,063,132	-				-0.9
2,063,132	-				+0.1
2,063,132	-				+0.4
2,063,132	-				+0.1
2,063,132	-				+1.0
2,063,166	+				-1.7
2,063,166	+				-1.0
2,063,167	-				-0.4
2,063,167	-				+0.1
2,063,187	+				-0.6
2,063,187	+				-0.3
2,063,187	+				-0.5
2,063,187	+				+0.9
2,063,188	-				-0.4
2,063,188	-				-0.4
2,063,188	-				-0.1
2,063,188	-				-0.0
2,063,196	+				-0.5
2,063,313	+		PfGW456L13_1875	0.10	-0.4
2,063,313	+		PfGW456L13_1875	0.10	+0.1
2,063,338	-		PfGW456L13_1875	0.12	-0.3
2,063,355	+		PfGW456L13_1875	0.13	-0.3
2,063,355	+		PfGW456L13_1875	0.13	-0.5
2,063,356	-		PfGW456L13_1875	0.13	+1.4
2,063,373	+		PfGW456L13_1875	0.15	+0.1
2,063,373	+		PfGW456L13_1875	0.15	-1.5
2,063,374	-		PfGW456L13_1875	0.15	+0.6
2,063,434	-		PfGW456L13_1875	0.19	-0.7
2,063,467	-		PfGW456L13_1875	0.21	+0.2
2,063,467	-		PfGW456L13_1875	0.21	-0.7
2,063,484	+		PfGW456L13_1875	0.22	+2.2
2,063,484	+		PfGW456L13_1875	0.22	+0.3
2,063,484	+		PfGW456L13_1875	0.22	+1.8
2,063,485	-		PfGW456L13_1875	0.22	+1.6
2,063,485	-		PfGW456L13_1875	0.22	+0.1
2,063,485	-		PfGW456L13_1875	0.22	-0.2
2,063,485	-		PfGW456L13_1875	0.22	-0.2
2,063,514	+		PfGW456L13_1875	0.24	+2.2
2,063,514	+		PfGW456L13_1875	0.24	+1.1
2,063,514	+		PfGW456L13_1875	0.24	-0.9
2,063,514	+		PfGW456L13_1875	0.24	+1.5
2,063,515	-		PfGW456L13_1875	0.25	+0.1
2,063,515	-		PfGW456L13_1875	0.25	-0.4
2,063,529	+		PfGW456L13_1875	0.25	+0.4
2,063,529	+		PfGW456L13_1875	0.25	+0.5
2,063,529	+		PfGW456L13_1875	0.25	-0.0
2,063,529	+		PfGW456L13_1875	0.25	+0.6
2,063,529	+		PfGW456L13_1875	0.25	+0.1
2,063,530	-		PfGW456L13_1875	0.26	+0.4
2,063,530	-		PfGW456L13_1875	0.26	+0.2
2,063,530	-		PfGW456L13_1875	0.26	+0.3
2,063,530	-		PfGW456L13_1875	0.26	+0.1
2,063,530	-		PfGW456L13_1875	0.26	+1.0
2,063,606	+		PfGW456L13_1875	0.31	+0.7
2,063,607	-		PfGW456L13_1875	0.31	-0.4
2,064,152	+		PfGW456L13_1875	0.69	+0.1
2,064,152	+		PfGW456L13_1875	0.69	-0.1
2,064,152	+		PfGW456L13_1875	0.69	-0.8
2,064,153	-		PfGW456L13_1875	0.69	-1.8
2,064,153	-		PfGW456L13_1875	0.69	+0.6
2,064,165	-		PfGW456L13_1875	0.70	-0.0
2,064,176	+		PfGW456L13_1875	0.71	+0.1
2,064,176	+		PfGW456L13_1875	0.71	+0.5
2,064,177	-		PfGW456L13_1875	0.71	+0.7
2,064,250	-		PfGW456L13_1875	0.76	-0.5
2,064,272	+		PfGW456L13_1875	0.78	-0.1
2,064,272	+		PfGW456L13_1875	0.78	+1.0
2,064,272	+		PfGW456L13_1875	0.78	-0.1
2,064,273	-		PfGW456L13_1875	0.78	-0.4
2,064,273	-		PfGW456L13_1875	0.78	+1.0
2,064,273	-		PfGW456L13_1875	0.78	+0.9
2,064,279	+		PfGW456L13_1875	0.78	-0.9
2,064,279	+		PfGW456L13_1875	0.78	-0.0
2,064,279	+		PfGW456L13_1875	0.78	+1.6
2,064,280	-		PfGW456L13_1875	0.78	-1.1
2,064,339	+		PfGW456L13_1875	0.82	+0.2
2,064,339	+		PfGW456L13_1875	0.82	+0.6
2,064,339	+		PfGW456L13_1875	0.82	+0.0
2,064,339	+		PfGW456L13_1875	0.82	+0.5
2,064,339	+		PfGW456L13_1875	0.82	+0.4
2,064,339	+		PfGW456L13_1875	0.82	+0.4
2,064,339	+		PfGW456L13_1875	0.82	-0.3
2,064,339	+		PfGW456L13_1875	0.82	-1.1
2,064,340	-		PfGW456L13_1875	0.82	+1.2
2,064,340	-		PfGW456L13_1875	0.82	+0.1
2,064,340	-		PfGW456L13_1875	0.82	-0.4
2,064,340	-		PfGW456L13_1875	0.82	-0.1
2,064,340	-		PfGW456L13_1875	0.82	-0.0
2,064,340	-		PfGW456L13_1875	0.82	+0.1
2,064,340	-		PfGW456L13_1875	0.82	+1.5
2,064,363	+		PfGW456L13_1875	0.84	-0.7
2,064,364	-		PfGW456L13_1875	0.84	+0.3
2,064,630	+				+1.0
2,064,631	-				-0.9
2,064,660	+				-0.4
2,064,661	-				+0.2
2,064,661	-				-0.8
2,064,669	-				+0.2
2,064,727	+				-0.5
2,064,728	-				-0.3
2,064,728	-				-0.1
2,064,739	+				-0.5
2,064,856	+				-0.1
2,064,883	+				+0.4
2,064,884	-				+0.3
2,064,950	+				-0.4
2,064,951	-				+0.1
2,064,951	-				+0.4
2,064,953	+				+0.1
2,064,953	+				+0.7
2,064,954	-				-1.5
2,064,954	-				+0.2
2,064,954	-				+0.1
2,064,969	-				+0.4
2,064,969	-				-0.4
2,064,969	-				+0.6
2,065,259	+		PfGW456L13_1876	0.16	+0.1
2,065,260	-		PfGW456L13_1876	0.16	-0.0
2,065,260	-		PfGW456L13_1876	0.16	+1.3
2,065,260	-		PfGW456L13_1876	0.16	+0.4
2,065,260	-		PfGW456L13_1876	0.16	+1.3
2,065,260	-		PfGW456L13_1876	0.16	-1.1
2,065,260	-		PfGW456L13_1876	0.16	+1.2
2,065,265	+		PfGW456L13_1876	0.16	+0.3
2,065,265	+		PfGW456L13_1876	0.16	-0.1
2,065,265	+		PfGW456L13_1876	0.16	+0.0
2,065,289	+		PfGW456L13_1876	0.18	-0.4
2,065,290	-		PfGW456L13_1876	0.18	+0.4
2,065,317	-		PfGW456L13_1876	0.20	-0.8
2,065,349	+		PfGW456L13_1876	0.22	-0.3
2,065,349	+		PfGW456L13_1876	0.22	+0.1
2,065,380	-		PfGW456L13_1876	0.24	-0.8
2,065,387	-		PfGW456L13_1876	0.25	+0.1
2,065,574	-				+0.6