Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0932

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0931 and B158DRAFT_0932 are separated by 144 nucleotidesB158DRAFT_0932 and B158DRAFT_0933 are separated by 3 nucleotides B158DRAFT_0931: B158DRAFT_0931 - amidase, hydantoinase/carbamoylase family, at 959,221 to 960,471 _0931 B158DRAFT_0932: B158DRAFT_0932 - hypothetical protein, at 960,616 to 961,119 _0932 B158DRAFT_0933: B158DRAFT_0933 - Na+/proline symporter, at 961,123 to 962,544 _0933 Position (kb) 960 961 962Strain fitness (log2 ratio) -1 0 1at 959.620 kb on + strand, within B158DRAFT_0931at 959.659 kb on - strand, within B158DRAFT_0931at 959.692 kb on + strand, within B158DRAFT_0931at 959.715 kb on + strand, within B158DRAFT_0931at 959.760 kb on + strand, within B158DRAFT_0931at 959.784 kb on + strand, within B158DRAFT_0931at 959.792 kb on - strand, within B158DRAFT_0931at 959.797 kb on - strand, within B158DRAFT_0931at 959.886 kb on + strand, within B158DRAFT_0931at 959.886 kb on + strand, within B158DRAFT_0931at 959.888 kb on + strand, within B158DRAFT_0931at 959.888 kb on + strand, within B158DRAFT_0931at 959.888 kb on + strand, within B158DRAFT_0931at 959.896 kb on - strand, within B158DRAFT_0931at 959.896 kb on - strand, within B158DRAFT_0931at 959.896 kb on - strand, within B158DRAFT_0931at 959.920 kb on + strand, within B158DRAFT_0931at 959.921 kb on + strand, within B158DRAFT_0931at 959.921 kb on + strand, within B158DRAFT_0931at 959.929 kb on - strand, within B158DRAFT_0931at 959.945 kb on + strand, within B158DRAFT_0931at 959.950 kb on + strand, within B158DRAFT_0931at 959.958 kb on - strand, within B158DRAFT_0931at 960.137 kb on - strand, within B158DRAFT_0931at 960.159 kb on + strand, within B158DRAFT_0931at 960.167 kb on - strand, within B158DRAFT_0931at 960.169 kb on + strand, within B158DRAFT_0931at 960.177 kb on - strand, within B158DRAFT_0931at 960.188 kb on + strand, within B158DRAFT_0931at 960.196 kb on - strand, within B158DRAFT_0931at 960.196 kb on - strand, within B158DRAFT_0931at 960.205 kb on + strand, within B158DRAFT_0931at 960.213 kb on - strand, within B158DRAFT_0931at 960.214 kb on + strand, within B158DRAFT_0931at 960.224 kb on + strand, within B158DRAFT_0931at 960.232 kb on - strand, within B158DRAFT_0931at 960.318 kb on - strand, within B158DRAFT_0931at 960.331 kb on - strand, within B158DRAFT_0931at 960.370 kb on + strandat 960.378 kb on - strandat 960.379 kb on - strandat 960.430 kb on + strandat 960.514 kb on - strandat 960.603 kb on + strandat 960.750 kb on - strand, within B158DRAFT_0932at 960.798 kb on + strand, within B158DRAFT_0932at 960.856 kb on - strand, within B158DRAFT_0932at 960.858 kb on + strand, within B158DRAFT_0932at 960.864 kb on - strand, within B158DRAFT_0932at 960.882 kb on + strand, within B158DRAFT_0932at 960.905 kb on - strand, within B158DRAFT_0932at 960.905 kb on - strand, within B158DRAFT_0932at 960.916 kb on + strand, within B158DRAFT_0932at 960.958 kb on + strand, within B158DRAFT_0932at 960.967 kb on + strand, within B158DRAFT_0932at 960.967 kb on + strand, within B158DRAFT_0932at 960.968 kb on - strand, within B158DRAFT_0932at 960.975 kb on - strand, within B158DRAFT_0932at 960.975 kb on - strand, within B158DRAFT_0932at 960.992 kb on + strand, within B158DRAFT_0932at 961.120 kb on + strandat 961.172 kb on + strandat 961.235 kb on + strandat 961.243 kb on - strandat 961.243 kb on - strandat 961.250 kb on + strandat 961.258 kb on - strandat 961.373 kb on - strand, within B158DRAFT_0933at 961.385 kb on - strand, within B158DRAFT_0933at 961.385 kb on - strand, within B158DRAFT_0933at 961.388 kb on + strand, within B158DRAFT_0933at 961.388 kb on + strand, within B158DRAFT_0933at 961.388 kb on + strand, within B158DRAFT_0933at 961.388 kb on + strand, within B158DRAFT_0933at 961.410 kb on + strand, within B158DRAFT_0933at 961.435 kb on + strand, within B158DRAFT_0933at 961.441 kb on + strand, within B158DRAFT_0933at 961.441 kb on + strand, within B158DRAFT_0933at 961.441 kb on + strand, within B158DRAFT_0933at 961.441 kb on + strand, within B158DRAFT_0933at 961.441 kb on + strand, within B158DRAFT_0933at 961.443 kb on - strand, within B158DRAFT_0933at 961.446 kb on + strand, within B158DRAFT_0933at 961.449 kb on - strand, within B158DRAFT_0933at 961.449 kb on - strand, within B158DRAFT_0933at 961.449 kb on - strand, within B158DRAFT_0933at 961.449 kb on - strand, within B158DRAFT_0933at 961.449 kb on - strand, within B158DRAFT_0933at 961.517 kb on + strand, within B158DRAFT_0933at 961.517 kb on + strand, within B158DRAFT_0933at 961.517 kb on + strand, within B158DRAFT_0933at 961.517 kb on + strand, within B158DRAFT_0933at 961.522 kb on + strand, within B158DRAFT_0933at 961.525 kb on - strand, within B158DRAFT_0933at 961.525 kb on - strand, within B158DRAFT_0933at 961.525 kb on - strand, within B158DRAFT_0933at 961.525 kb on - strand, within B158DRAFT_0933at 961.525 kb on - strand, within B158DRAFT_0933at 961.525 kb on - strand, within B158DRAFT_0933at 961.535 kb on - strand, within B158DRAFT_0933at 961.541 kb on + strand, within B158DRAFT_0933at 961.545 kb on + strand, within B158DRAFT_0933at 961.545 kb on + strand, within B158DRAFT_0933at 961.545 kb on + strand, within B158DRAFT_0933at 961.545 kb on + strand, within B158DRAFT_0933at 961.545 kb on + strand, within B158DRAFT_0933at 961.545 kb on + strand, within B158DRAFT_0933at 961.545 kb on + strand, within B158DRAFT_0933at 961.551 kb on + strand, within B158DRAFT_0933at 961.551 kb on + strand, within B158DRAFT_0933at 961.553 kb on - strand, within B158DRAFT_0933at 961.566 kb on + strand, within B158DRAFT_0933at 961.589 kb on + strand, within B158DRAFT_0933at 961.597 kb on - strand, within B158DRAFT_0933at 961.597 kb on - strand, within B158DRAFT_0933at 961.599 kb on + strand, within B158DRAFT_0933at 961.629 kb on + strand, within B158DRAFT_0933at 961.631 kb on + strand, within B158DRAFT_0933at 961.631 kb on + strand, within B158DRAFT_0933at 961.631 kb on + strand, within B158DRAFT_0933at 961.637 kb on - strand, within B158DRAFT_0933at 961.637 kb on - strand, within B158DRAFT_0933at 961.639 kb on - strand, within B158DRAFT_0933at 961.660 kb on + strand, within B158DRAFT_0933at 961.705 kb on + strand, within B158DRAFT_0933at 961.785 kb on - strand, within B158DRAFT_0933at 961.785 kb on - strand, within B158DRAFT_0933at 962.017 kb on + strand, within B158DRAFT_0933at 962.025 kb on - strand, within B158DRAFT_0933at 962.066 kb on - strand, within B158DRAFT_0933

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 1-ethyl-3-methylimidazolium acetate 2.5 mM
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959,620 + B158DRAFT_0931 0.32 +0.8
959,659 - B158DRAFT_0931 0.35 -0.4
959,692 + B158DRAFT_0931 0.38 -0.0
959,715 + B158DRAFT_0931 0.39 -0.5
959,760 + B158DRAFT_0931 0.43 -0.3
959,784 + B158DRAFT_0931 0.45 -0.2
959,792 - B158DRAFT_0931 0.46 -0.0
959,797 - B158DRAFT_0931 0.46 -0.5
959,886 + B158DRAFT_0931 0.53 -0.2
959,886 + B158DRAFT_0931 0.53 -0.0
959,888 + B158DRAFT_0931 0.53 -1.1
959,888 + B158DRAFT_0931 0.53 -0.1
959,888 + B158DRAFT_0931 0.53 +0.4
959,896 - B158DRAFT_0931 0.54 -0.5
959,896 - B158DRAFT_0931 0.54 -0.1
959,896 - B158DRAFT_0931 0.54 +0.3
959,920 + B158DRAFT_0931 0.56 -0.2
959,921 + B158DRAFT_0931 0.56 -0.5
959,921 + B158DRAFT_0931 0.56 +0.1
959,929 - B158DRAFT_0931 0.57 -0.5
959,945 + B158DRAFT_0931 0.58 -0.2
959,950 + B158DRAFT_0931 0.58 -0.5
959,958 - B158DRAFT_0931 0.59 -0.3
960,137 - B158DRAFT_0931 0.73 -0.4
960,159 + B158DRAFT_0931 0.75 -1.5
960,167 - B158DRAFT_0931 0.76 -0.8
960,169 + B158DRAFT_0931 0.76 -0.3
960,177 - B158DRAFT_0931 0.76 -0.1
960,188 + B158DRAFT_0931 0.77 -0.1
960,196 - B158DRAFT_0931 0.78 +0.2
960,196 - B158DRAFT_0931 0.78 -0.1
960,205 + B158DRAFT_0931 0.79 -0.4
960,213 - B158DRAFT_0931 0.79 -0.2
960,214 + B158DRAFT_0931 0.79 -0.5
960,224 + B158DRAFT_0931 0.80 -0.0
960,232 - B158DRAFT_0931 0.81 -0.1
960,318 - B158DRAFT_0931 0.88 +0.1
960,331 - B158DRAFT_0931 0.89 -0.5
960,370 + -0.1
960,378 - -0.6
960,379 - -0.2
960,430 + -0.4
960,514 - -0.3
960,603 + +0.0
960,750 - B158DRAFT_0932 0.27 -0.5
960,798 + B158DRAFT_0932 0.36 -0.6
960,856 - B158DRAFT_0932 0.48 -0.1
960,858 + B158DRAFT_0932 0.48 -0.5
960,864 - B158DRAFT_0932 0.49 -0.5
960,882 + B158DRAFT_0932 0.53 -0.1
960,905 - B158DRAFT_0932 0.57 -0.4
960,905 - B158DRAFT_0932 0.57 -0.2
960,916 + B158DRAFT_0932 0.60 -0.6
960,958 + B158DRAFT_0932 0.68 -1.3
960,967 + B158DRAFT_0932 0.70 -0.0
960,967 + B158DRAFT_0932 0.70 +0.1
960,968 - B158DRAFT_0932 0.70 -0.7
960,975 - B158DRAFT_0932 0.71 -0.3
960,975 - B158DRAFT_0932 0.71 -0.2
960,992 + B158DRAFT_0932 0.75 +0.3
961,120 + +0.1
961,172 + -0.2
961,235 + -0.8
961,243 - -0.3
961,243 - +0.5
961,250 + -0.4
961,258 - -0.1
961,373 - B158DRAFT_0933 0.18 +0.1
961,385 - B158DRAFT_0933 0.18 -0.7
961,385 - B158DRAFT_0933 0.18 -1.0
961,388 + B158DRAFT_0933 0.19 -0.0
961,388 + B158DRAFT_0933 0.19 -0.3
961,388 + B158DRAFT_0933 0.19 -0.3
961,388 + B158DRAFT_0933 0.19 -0.2
961,410 + B158DRAFT_0933 0.20 +0.1
961,435 + B158DRAFT_0933 0.22 +0.1
961,441 + B158DRAFT_0933 0.22 -0.3
961,441 + B158DRAFT_0933 0.22 +0.6
961,441 + B158DRAFT_0933 0.22 +0.2
961,441 + B158DRAFT_0933 0.22 -0.4
961,441 + B158DRAFT_0933 0.22 -0.4
961,443 - B158DRAFT_0933 0.23 -0.2
961,446 + B158DRAFT_0933 0.23 -0.4
961,449 - B158DRAFT_0933 0.23 -0.5
961,449 - B158DRAFT_0933 0.23 -0.2
961,449 - B158DRAFT_0933 0.23 -0.2
961,449 - B158DRAFT_0933 0.23 -0.3
961,449 - B158DRAFT_0933 0.23 -0.2
961,517 + B158DRAFT_0933 0.28 +0.7
961,517 + B158DRAFT_0933 0.28 -0.1
961,517 + B158DRAFT_0933 0.28 -0.1
961,517 + B158DRAFT_0933 0.28 +0.6
961,522 + B158DRAFT_0933 0.28 +0.3
961,525 - B158DRAFT_0933 0.28 -0.7
961,525 - B158DRAFT_0933 0.28 -0.1
961,525 - B158DRAFT_0933 0.28 +0.2
961,525 - B158DRAFT_0933 0.28 -0.3
961,525 - B158DRAFT_0933 0.28 -0.5
961,525 - B158DRAFT_0933 0.28 -0.1
961,535 - B158DRAFT_0933 0.29 +0.4
961,541 + B158DRAFT_0933 0.29 -0.1
961,545 + B158DRAFT_0933 0.30 -0.2
961,545 + B158DRAFT_0933 0.30 -0.1
961,545 + B158DRAFT_0933 0.30 -0.1
961,545 + B158DRAFT_0933 0.30 -0.1
961,545 + B158DRAFT_0933 0.30 +0.2
961,545 + B158DRAFT_0933 0.30 +0.5
961,545 + B158DRAFT_0933 0.30 -0.4
961,551 + B158DRAFT_0933 0.30 -0.8
961,551 + B158DRAFT_0933 0.30 +0.6
961,553 - B158DRAFT_0933 0.30 -0.9
961,566 + B158DRAFT_0933 0.31 +0.2
961,589 + B158DRAFT_0933 0.33 -0.1
961,597 - B158DRAFT_0933 0.33 -0.4
961,597 - B158DRAFT_0933 0.33 -0.2
961,599 + B158DRAFT_0933 0.33 -0.1
961,629 + B158DRAFT_0933 0.36 -0.1
961,631 + B158DRAFT_0933 0.36 +0.1
961,631 + B158DRAFT_0933 0.36 -0.2
961,631 + B158DRAFT_0933 0.36 -0.3
961,637 - B158DRAFT_0933 0.36 -0.6
961,637 - B158DRAFT_0933 0.36 -0.4
961,639 - B158DRAFT_0933 0.36 -0.5
961,660 + B158DRAFT_0933 0.38 -0.4
961,705 + B158DRAFT_0933 0.41 -0.4
961,785 - B158DRAFT_0933 0.47 +0.2
961,785 - B158DRAFT_0933 0.47 -0.4
962,017 + B158DRAFT_0933 0.63 -0.1
962,025 - B158DRAFT_0933 0.63 -1.4
962,066 - B158DRAFT_0933 0.66 +0.1

Or see this region's nucleotide sequence