Strain Fitness in Agrobacterium fabrum C58 around Atu6127

Experiment: L-Methionine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Methionine (N)
143,018	-		Atu6124	0.89	+0.0
143,068	+				+1.6
143,068	+				+2.6
143,068	+				+2.1
143,068	+				+0.2
143,068	+				+1.0
143,076	-				-0.9
143,076	-				+0.8
143,083	+				+1.7
143,099	+				+0.5
143,114	+				-0.6
143,243	-		Atu6125	0.13	-0.9
143,259	-		Atu6125	0.19	-0.9
143,338	+		Atu6125	0.51	+0.4
143,338	+		Atu6125	0.51	+0.6
143,343	+		Atu6125	0.53	+0.1
143,343	+		Atu6125	0.53	+1.5
143,346	-		Atu6125	0.54	+0.7
143,403	+		Atu6125	0.78	+1.0
143,430	+		Atu6125	0.89	-0.0
143,430	+		Atu6125	0.89	-1.0
143,440	+				+0.3
143,450	+				+0.4
143,458	-				+0.0
143,485	+		Atu6126	0.18	+1.7
143,485	+		Atu6126	0.18	+0.2
143,493	-		Atu6126	0.21	-0.3
143,493	-		Atu6126	0.21	+0.9
143,493	-		Atu6126	0.21	+1.5
143,493	-		Atu6126	0.21	+1.4
143,534	+		Atu6126	0.34	+1.1
143,567	+		Atu6126	0.45	+1.0
143,584	+		Atu6126	0.51	+2.3
143,585	-		Atu6126	0.52	+0.9
143,585	-		Atu6126	0.52	+0.3
143,598	+		Atu6126	0.56	+1.3
143,621	-		Atu6126	0.64	-0.7
143,621	-		Atu6126	0.64	-0.9
143,658	+		Atu6126	0.76	+2.9
143,670	+		Atu6126	0.80	-0.5
143,718	+				+2.6
143,732	+				+0.2
143,805	+				-0.8
143,805	+				-0.8
143,813	-				+0.2
143,835	+				+0.3
143,891	-				-0.1
143,916	+				+1.1
143,938	+				+1.1
144,001	+				-0.5
144,059	+				+1.9
144,059	+				-0.6
144,162	+				-0.9
144,185	+				+1.5
144,195	+				+2.3
144,218	+				-0.2
144,240	-				+3.0
144,301	+				+1.1
144,301	+				+0.4
144,306	+				-0.7
144,309	-				+0.8
144,309	-				+0.1
144,311	+				+3.3
144,318	+		Atu6127	0.10	-0.1
144,356	-		Atu6127	0.11	-0.8
144,356	-		Atu6127	0.11	+1.7
144,358	+		Atu6127	0.11	+0.0
144,372	-		Atu6127	0.12	+0.6
144,395	+		Atu6127	0.12	-0.2
144,484	-		Atu6127	0.15	-1.2
144,564	-		Atu6127	0.17	+1.4
144,597	-		Atu6127	0.18	-1.6
144,650	-		Atu6127	0.20	+0.1
144,671	-		Atu6127	0.21	+1.7
144,880	+		Atu6127	0.27	-0.4
144,951	-		Atu6127	0.29	-0.6
144,953	-		Atu6127	0.29	-0.7
144,992	-		Atu6127	0.30	-0.8
145,013	-		Atu6127	0.31	-1.4
145,094	+		Atu6127	0.34	-1.1
145,190	+		Atu6127	0.36	+0.3
145,216	+		Atu6127	0.37	+1.8
145,233	-		Atu6127	0.38	+2.1
145,245	+		Atu6127	0.38	+0.8
145,253	-		Atu6127	0.38	+1.5
145,342	+		Atu6127	0.41	+1.8
145,344	+		Atu6127	0.41	-0.6
145,347	+		Atu6127	0.41	+0.1
145,347	+		Atu6127	0.41	+0.1
145,358	+		Atu6127	0.42	+0.1
145,379	-		Atu6127	0.42	+0.4
145,428	+		Atu6127	0.44	+1.2
145,462	+		Atu6127	0.45	+1.3
145,507	+		Atu6127	0.46	+2.7
145,555	+		Atu6127	0.47	+0.9
145,623	+		Atu6127	0.50	+0.5
145,640	+		Atu6127	0.50	+0.3
145,668	-		Atu6127	0.51	+2.1
145,793	+		Atu6127	0.55	+1.2
145,798	+		Atu6127	0.55	+1.4
145,858	+		Atu6127	0.57	+2.5
145,918	+		Atu6127	0.58	+0.2
145,929	+		Atu6127	0.59	+0.1
145,961	+		Atu6127	0.60	+0.2
145,963	+		Atu6127	0.60	+0.8
146,072	-		Atu6127	0.63	+0.3
146,095	-		Atu6127	0.64	+0.8
146,099	+		Atu6127	0.64	+1.1
146,099	+		Atu6127	0.64	-0.4
146,109	+		Atu6127	0.64	+0.2
146,110	+		Atu6127	0.64	-0.3
146,110	+		Atu6127	0.64	-0.1
146,117	-		Atu6127	0.64	+0.0
146,117	-		Atu6127	0.64	+4.3
146,118	-		Atu6127	0.65	+1.8
146,118	-		Atu6127	0.65	-0.7
146,154	+		Atu6127	0.66	+0.0
146,180	+		Atu6127	0.66	-1.3
146,180	+		Atu6127	0.66	+0.7
146,199	-		Atu6127	0.67	-0.0
146,230	+		Atu6127	0.68	-0.2
146,376	+		Atu6127	0.72	+1.1
146,382	-		Atu6127	0.73	+0.1
146,421	+		Atu6127	0.74	+0.2
146,429	-		Atu6127	0.74	+1.3
146,456	-		Atu6127	0.75	-0.8
146,531	-		Atu6127	0.77	-0.3
146,677	-		Atu6127	0.81	+2.0
146,677	-		Atu6127	0.81	+0.3
146,716	+		Atu6127	0.83	+2.5
146,755	+		Atu6127	0.84	+2.7
146,794	+		Atu6127	0.85	+1.4
146,794	+		Atu6127	0.85	+0.8
146,794	+		Atu6127	0.85	+0.6
146,794	+		Atu6127	0.85	-0.1
146,941	+		Atu6127	0.89	+1.5
146,941	+		Atu6127	0.89	-0.0
146,947	-		Atu6127	0.90	+0.0
147,050	-				-0.4
147,077	+				+1.3
147,077	+				-0.3
147,082	+				-0.6
147,141	+				+0.2
147,164	+				-0.3
147,212	-				-0.0
147,236	-				+1.7
147,288	+				+0.7
147,301	+				-0.4
147,301	+				+1.3
147,331	+				-0.4
147,339	-		Atu6128	0.10	+2.7
147,339	-		Atu6128	0.10	+0.3
147,469	+		Atu6128	0.34	+0.0
147,515	+		Atu6128	0.43	+1.5
147,525	+		Atu6128	0.45	-0.5
147,535	-		Atu6128	0.47	+0.7
147,535	-		Atu6128	0.47	+1.3
147,536	+		Atu6128	0.47	-0.9
147,627	+		Atu6128	0.64	+0.6
147,651	+		Atu6128	0.69	+1.5
147,673	+		Atu6128	0.73	+0.5
147,749	+		Atu6128	0.87	+1.5
147,757	-		Atu6128	0.89	-0.8
147,768	-				+1.5
147,768	-				-0.6
147,783	-				-0.6
147,796	+				+0.1
147,803	+				+0.6
147,804	-				+1.5
147,806	-				-0.5
147,806	-				+2.0
147,835	+				+0.6
147,902	+				+1.0
148,005	-				+0.5
148,023	-		Atu6129	0.11	+0.5
148,049	-		Atu6129	0.13	+0.2
148,101	-		Atu6129	0.18	+1.6
148,101	-		Atu6129	0.18	+1.0
148,141	+		Atu6129	0.21	-0.2
148,141	+		Atu6129	0.21	+0.6
148,149	-		Atu6129	0.22	-0.4
148,198	-		Atu6129	0.27	+0.1
148,223	+		Atu6129	0.29	-0.0
148,274	+		Atu6129	0.34	+1.2