Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_108 and PfGW456L13_109 are separated by 387 nucleotides PfGW456L13_109 and PfGW456L13_110 are separated by 172 nucleotides
PfGW456L13_108 - exported protein, conserved, at 125,397 to 127,466
_108
PfGW456L13_109 - FIG00963947: hypothetical protein, at 127,854 to 128,324
_109
PfGW456L13_110 - Unsaturated fatty acid biosythesis repressor FabR, TetR family, at 128,497 to 129,129
_110
Position (kb)
127
128
129 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 126.878 kb on + strand, within PfGW456L13_108 at 126.918 kb on + strand, within PfGW456L13_108 at 126.918 kb on + strand, within PfGW456L13_108 at 127.151 kb on + strand, within PfGW456L13_108 at 127.151 kb on + strand, within PfGW456L13_108 at 127.151 kb on + strand, within PfGW456L13_108 at 127.152 kb on - strand, within PfGW456L13_108 at 127.152 kb on - strand, within PfGW456L13_108 at 127.152 kb on - strand, within PfGW456L13_108 at 127.398 kb on + strand at 127.398 kb on + strand at 127.398 kb on + strand at 127.398 kb on + strand at 127.399 kb on - strand at 127.399 kb on - strand at 127.418 kb on + strand at 127.418 kb on + strand at 127.483 kb on + strand at 127.551 kb on + strand at 127.551 kb on + strand at 127.551 kb on + strand at 127.551 kb on + strand at 127.552 kb on - strand at 127.552 kb on - strand at 127.552 kb on - strand at 127.560 kb on + strand at 127.560 kb on + strand at 127.578 kb on - strand at 127.616 kb on + strand at 127.760 kb on - strand at 127.760 kb on - strand at 127.760 kb on - strand at 127.760 kb on - strand at 127.760 kb on - strand at 127.763 kb on - strand at 127.825 kb on + strand at 127.826 kb on - strand at 127.826 kb on - strand at 127.826 kb on - strand at 127.867 kb on + strand at 127.867 kb on + strand at 127.867 kb on + strand at 127.867 kb on + strand at 127.867 kb on + strand at 127.867 kb on + strand at 127.867 kb on + strand at 127.868 kb on - strand at 127.868 kb on - strand at 127.868 kb on - strand at 127.868 kb on - strand at 127.868 kb on - strand at 127.868 kb on - strand at 127.874 kb on + strand at 127.880 kb on + strand at 127.880 kb on + strand at 127.881 kb on - strand at 127.881 kb on - strand at 127.881 kb on - strand at 128.084 kb on + strand, within PfGW456L13_109 at 128.084 kb on + strand, within PfGW456L13_109 at 128.210 kb on + strand, within PfGW456L13_109 at 128.211 kb on - strand, within PfGW456L13_109 at 128.322 kb on + strand at 128.322 kb on + strand at 128.322 kb on + strand at 128.322 kb on + strand at 128.322 kb on + strand at 128.322 kb on + strand at 128.322 kb on + strand at 128.322 kb on + strand at 128.322 kb on + strand at 128.323 kb on - strand at 128.323 kb on - strand at 128.323 kb on - strand at 128.323 kb on - strand at 128.323 kb on - strand at 128.323 kb on - strand at 128.396 kb on - strand at 128.396 kb on - strand at 128.396 kb on - strand at 128.458 kb on + strand at 128.458 kb on + strand at 128.459 kb on - strand at 128.459 kb on - strand at 128.627 kb on + strand, within PfGW456L13_110 at 128.628 kb on - strand, within PfGW456L13_110 at 128.679 kb on - strand, within PfGW456L13_110 at 128.726 kb on + strand, within PfGW456L13_110 at 128.726 kb on + strand, within PfGW456L13_110 at 128.727 kb on - strand, within PfGW456L13_110 at 128.745 kb on - strand, within PfGW456L13_110 at 129.081 kb on + strand at 129.081 kb on + strand at 129.081 kb on + strand at 129.081 kb on + strand at 129.082 kb on - strand at 129.082 kb on - strand at 129.127 kb on + strand at 129.128 kb on - strand at 129.255 kb on + strand at 129.256 kb on - strand at 129.256 kb on - strand at 129.256 kb on - strand at 129.301 kb on + strand at 129.302 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 126,878 + PfGW456L13_108 0.72 -0.7 126,918 + PfGW456L13_108 0.73 +0.2 126,918 + PfGW456L13_108 0.73 +0.1 127,151 + PfGW456L13_108 0.85 -0.5 127,151 + PfGW456L13_108 0.85 -0.1 127,151 + PfGW456L13_108 0.85 +0.3 127,152 - PfGW456L13_108 0.85 +0.6 127,152 - PfGW456L13_108 0.85 -1.4 127,152 - PfGW456L13_108 0.85 -0.5 127,398 + +0.3 127,398 + +0.5 127,398 + +0.9 127,398 + +0.1 127,399 - +0.8 127,399 - +0.3 127,418 + -0.4 127,418 + -1.4 127,483 + +1.4 127,551 + -0.2 127,551 + -0.8 127,551 + +0.0 127,551 + -0.2 127,552 - +0.3 127,552 - +1.5 127,552 - +1.2 127,560 + -0.2 127,560 + +1.5 127,578 - +0.6 127,616 + +0.5 127,760 - -0.1 127,760 - +1.8 127,760 - -1.3 127,760 - +1.1 127,760 - -0.1 127,763 - -0.0 127,825 + -0.7 127,826 - +0.2 127,826 - +0.6 127,826 - +0.6 127,867 + +0.1 127,867 + +0.3 127,867 + +0.5 127,867 + -1.0 127,867 + +0.6 127,867 + +0.6 127,867 + -0.1 127,868 - +0.5 127,868 - -0.4 127,868 - +0.3 127,868 - -2.2 127,868 - +0.5 127,868 - +1.0 127,874 + -0.5 127,880 + +0.9 127,880 + -1.0 127,881 - +0.3 127,881 - +0.1 127,881 - -0.1 128,084 + PfGW456L13_109 0.49 +0.1 128,084 + PfGW456L13_109 0.49 -0.3 128,210 + PfGW456L13_109 0.76 -0.1 128,211 - PfGW456L13_109 0.76 -0.3 128,322 + +1.9 128,322 + -1.1 128,322 + -0.9 128,322 + +0.6 128,322 + +0.1 128,322 + -1.1 128,322 + -0.9 128,322 + +0.7 128,322 + +0.4 128,323 - -0.1 128,323 - +0.6 128,323 - -2.0 128,323 - +0.0 128,323 - +0.6 128,323 - +0.3 128,396 - +0.1 128,396 - +0.7 128,396 - +0.4 128,458 + +1.1 128,458 + -0.0 128,459 - -0.4 128,459 - -1.2 128,627 + PfGW456L13_110 0.21 -0.8 128,628 - PfGW456L13_110 0.21 +0.4 128,679 - PfGW456L13_110 0.29 +0.5 128,726 + PfGW456L13_110 0.36 -0.1 128,726 + PfGW456L13_110 0.36 -1.5 128,727 - PfGW456L13_110 0.36 +0.4 128,745 - PfGW456L13_110 0.39 -0.2 129,081 + +1.7 129,081 + +1.0 129,081 + -0.5 129,081 + -0.2 129,082 - +1.2 129,082 - -0.5 129,127 + -1.5 129,128 - +0.1 129,255 + -0.1 129,256 - +0.4 129,256 - -0.1 129,256 - +0.6 129,301 + -1.2 129,302 - -0.4
Or see this region's nucleotide sequence