Experiment: m.b. acetate 300 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2261 and B158DRAFT_2262 are separated by 37 nucleotides B158DRAFT_2262 and B158DRAFT_2263 are separated by 19 nucleotides B158DRAFT_2263 and B158DRAFT_2264 are separated by 54 nucleotides B158DRAFT_2264 and B158DRAFT_2265 are separated by 104 nucleotides
B158DRAFT_2261: B158DRAFT_2261 - ribosomal protein S16, at 425,594 to 425,839
_2261
B158DRAFT_2262: B158DRAFT_2262 - 16S rRNA processing protein RimM, at 425,877 to 426,398
_2262
B158DRAFT_2263: B158DRAFT_2263 - tRNA (guanine-N1)-methyltransferase, at 426,418 to 427,185
_2263
B158DRAFT_2264: B158DRAFT_2264 - ribosomal protein L19, bacterial type, at 427,240 to 427,596
_2264
B158DRAFT_2265: B158DRAFT_2265 - tyrosine recombinase XerD, at 427,701 to 428,588
_2265
Position (kb) 426
427
428 Strain fitness (log2 ratio) -2
-1
0
1 at 427.736 kb on + strand at 427.744 kb on - strand at 427.744 kb on - strand at 427.744 kb on - strand at 427.754 kb on - strand at 427.759 kb on - strand at 427.759 kb on - strand at 427.989 kb on - strand, within B158DRAFT_2265 at 428.053 kb on - strand, within B158DRAFT_2265 at 428.082 kb on + strand, within B158DRAFT_2265 at 428.138 kb on - strand, within B158DRAFT_2265
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 300 mM remove 427,736 + -2.4 427,744 - -1.7 427,744 - -1.0 427,744 - -1.2 427,754 - -1.6 427,759 - -0.6 427,759 - -1.1 427,989 - B158DRAFT_2265 0.32 -0.2 428,053 - B158DRAFT_2265 0.40 -1.6 428,082 + B158DRAFT_2265 0.43 -0.9 428,138 - B158DRAFT_2265 0.49 -0.9
Or see this region's nucleotide sequence