Experiment: m.b. acetate 300 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2209 and B158DRAFT_2210 are separated by 205 nucleotides B158DRAFT_2210 and B158DRAFT_2211 are separated by 13 nucleotides B158DRAFT_2211 and B158DRAFT_2212 are separated by 2 nucleotides
B158DRAFT_2209: B158DRAFT_2209 - Bacterial virulence factor lipase N-terminal., at 355,347 to 357,488
_2209
B158DRAFT_2210: B158DRAFT_2210 - Periplasmic serine proteases (ClpP class), at 357,694 to 358,851
_2210
B158DRAFT_2211: B158DRAFT_2211 - thiopurine S-methyltransferase, Se/Te detoxification family, at 358,865 to 359,527
_2211
B158DRAFT_2212: B158DRAFT_2212 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 359,530 to 361,419
_2212
Position (kb) 357
358
359 Strain fitness (log2 ratio) -1
0
1 at 356.719 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.845 kb on - strand, within B158DRAFT_2209 at 356.869 kb on + strand, within B158DRAFT_2209 at 356.869 kb on + strand, within B158DRAFT_2209 at 356.923 kb on - strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.987 kb on - strand, within B158DRAFT_2209 at 356.992 kb on - strand, within B158DRAFT_2209 at 356.992 kb on - strand, within B158DRAFT_2209 at 357.140 kb on - strand, within B158DRAFT_2209 at 357.141 kb on + strand, within B158DRAFT_2209 at 357.149 kb on - strand, within B158DRAFT_2209 at 357.179 kb on + strand, within B158DRAFT_2209 at 357.179 kb on + strand, within B158DRAFT_2209 at 357.245 kb on + strand, within B158DRAFT_2209 at 357.280 kb on - strand at 357.288 kb on + strand at 357.369 kb on + strand at 357.371 kb on + strand at 357.377 kb on - strand at 357.379 kb on - strand at 357.443 kb on - strand at 357.460 kb on - strand at 357.490 kb on + strand at 357.490 kb on + strand at 357.498 kb on - strand at 357.584 kb on + strand at 357.584 kb on + strand at 357.591 kb on + strand at 357.591 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.777 kb on + strand at 357.777 kb on + strand at 357.793 kb on + strand at 357.826 kb on + strand, within B158DRAFT_2210 at 357.827 kb on - strand, within B158DRAFT_2210 at 357.827 kb on - strand, within B158DRAFT_2210 at 357.834 kb on - strand, within B158DRAFT_2210 at 357.862 kb on - strand, within B158DRAFT_2210 at 357.895 kb on + strand, within B158DRAFT_2210 at 358.011 kb on + strand, within B158DRAFT_2210 at 358.143 kb on + strand, within B158DRAFT_2210 at 358.149 kb on - strand, within B158DRAFT_2210 at 358.149 kb on - strand, within B158DRAFT_2210 at 358.204 kb on - strand, within B158DRAFT_2210 at 358.211 kb on - strand, within B158DRAFT_2210 at 358.231 kb on - strand, within B158DRAFT_2210 at 358.237 kb on + strand, within B158DRAFT_2210 at 358.239 kb on - strand, within B158DRAFT_2210 at 358.244 kb on + strand, within B158DRAFT_2210 at 358.244 kb on + strand, within B158DRAFT_2210 at 358.245 kb on - strand, within B158DRAFT_2210 at 358.252 kb on - strand, within B158DRAFT_2210 at 358.274 kb on - strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.354 kb on + strand, within B158DRAFT_2210 at 358.472 kb on - strand, within B158DRAFT_2210 at 358.512 kb on - strand, within B158DRAFT_2210 at 358.512 kb on - strand, within B158DRAFT_2210 at 358.517 kb on - strand, within B158DRAFT_2210 at 358.517 kb on - strand, within B158DRAFT_2210 at 358.517 kb on - strand, within B158DRAFT_2210 at 358.592 kb on + strand, within B158DRAFT_2210 at 358.605 kb on - strand, within B158DRAFT_2210 at 358.606 kb on - strand, within B158DRAFT_2210 at 358.614 kb on + strand, within B158DRAFT_2210 at 358.615 kb on + strand, within B158DRAFT_2210 at 358.622 kb on - strand, within B158DRAFT_2210 at 358.632 kb on + strand, within B158DRAFT_2210 at 358.632 kb on - strand, within B158DRAFT_2210 at 358.649 kb on - strand, within B158DRAFT_2210 at 358.715 kb on - strand, within B158DRAFT_2210 at 358.715 kb on - strand, within B158DRAFT_2210 at 358.723 kb on - strand, within B158DRAFT_2210 at 358.772 kb on + strand at 358.794 kb on + strand at 358.822 kb on - strand at 358.841 kb on - strand at 358.887 kb on + strand at 358.928 kb on + strand at 358.935 kb on - strand, within B158DRAFT_2211 at 359.038 kb on + strand, within B158DRAFT_2211 at 359.046 kb on - strand, within B158DRAFT_2211 at 359.051 kb on - strand, within B158DRAFT_2211 at 359.059 kb on + strand, within B158DRAFT_2211 at 359.065 kb on + strand, within B158DRAFT_2211 at 359.073 kb on - strand, within B158DRAFT_2211 at 359.095 kb on + strand, within B158DRAFT_2211 at 359.109 kb on - strand, within B158DRAFT_2211 at 359.128 kb on + strand, within B158DRAFT_2211 at 359.128 kb on - strand, within B158DRAFT_2211 at 359.128 kb on - strand, within B158DRAFT_2211 at 359.144 kb on - strand, within B158DRAFT_2211 at 359.224 kb on + strand, within B158DRAFT_2211 at 359.224 kb on + strand, within B158DRAFT_2211 at 359.224 kb on + strand, within B158DRAFT_2211 at 359.234 kb on + strand, within B158DRAFT_2211 at 359.242 kb on - strand, within B158DRAFT_2211 at 359.253 kb on + strand, within B158DRAFT_2211 at 359.259 kb on - strand, within B158DRAFT_2211 at 359.281 kb on + strand, within B158DRAFT_2211 at 359.302 kb on - strand, within B158DRAFT_2211 at 359.332 kb on - strand, within B158DRAFT_2211 at 359.333 kb on - strand, within B158DRAFT_2211 at 359.383 kb on + strand, within B158DRAFT_2211 at 359.425 kb on + strand, within B158DRAFT_2211 at 359.432 kb on + strand, within B158DRAFT_2211 at 359.455 kb on + strand, within B158DRAFT_2211 at 359.477 kb on + strand at 359.486 kb on - strand at 359.555 kb on + strand at 359.563 kb on - strand at 359.563 kb on - strand at 359.645 kb on + strand at 359.662 kb on + strand at 359.668 kb on - strand at 359.668 kb on - strand at 359.668 kb on - strand at 359.668 kb on - strand at 359.672 kb on + strand at 359.678 kb on + strand at 359.680 kb on + strand at 359.680 kb on - strand at 359.714 kb on - strand at 359.727 kb on + strand, within B158DRAFT_2212 at 359.729 kb on + strand, within B158DRAFT_2212 at 359.729 kb on + strand, within B158DRAFT_2212 at 359.729 kb on + strand, within B158DRAFT_2212 at 359.729 kb on + strand, within B158DRAFT_2212 at 359.737 kb on - strand, within B158DRAFT_2212 at 359.737 kb on - strand, within B158DRAFT_2212 at 359.785 kb on + strand, within B158DRAFT_2212 at 359.791 kb on + strand, within B158DRAFT_2212
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 300 mM remove 356,719 + B158DRAFT_2209 0.64 +0.1 356,817 + B158DRAFT_2209 0.69 -0.3 356,817 + B158DRAFT_2209 0.69 -0.3 356,817 + B158DRAFT_2209 0.69 -0.3 356,817 + B158DRAFT_2209 0.69 -0.0 356,817 + B158DRAFT_2209 0.69 -0.1 356,817 + B158DRAFT_2209 0.69 -0.5 356,817 + B158DRAFT_2209 0.69 -0.0 356,817 + B158DRAFT_2209 0.69 -0.5 356,817 + B158DRAFT_2209 0.69 -0.3 356,817 + B158DRAFT_2209 0.69 -0.2 356,817 + B158DRAFT_2209 0.69 -0.0 356,817 + B158DRAFT_2209 0.69 +0.3 356,825 - B158DRAFT_2209 0.69 -0.2 356,825 - B158DRAFT_2209 0.69 +0.2 356,825 - B158DRAFT_2209 0.69 -0.3 356,825 - B158DRAFT_2209 0.69 -0.3 356,825 - B158DRAFT_2209 0.69 -0.6 356,845 - B158DRAFT_2209 0.70 +0.7 356,869 + B158DRAFT_2209 0.71 -0.4 356,869 + B158DRAFT_2209 0.71 -0.4 356,923 - B158DRAFT_2209 0.74 -0.2 356,984 + B158DRAFT_2209 0.76 +0.3 356,984 + B158DRAFT_2209 0.76 +0.1 356,984 + B158DRAFT_2209 0.76 -0.7 356,984 + B158DRAFT_2209 0.76 -0.3 356,984 + B158DRAFT_2209 0.76 +1.0 356,984 + B158DRAFT_2209 0.76 -0.4 356,984 + B158DRAFT_2209 0.76 +0.5 356,987 - B158DRAFT_2209 0.77 +0.2 356,992 - B158DRAFT_2209 0.77 -0.6 356,992 - B158DRAFT_2209 0.77 -0.5 357,140 - B158DRAFT_2209 0.84 +0.1 357,141 + B158DRAFT_2209 0.84 +0.2 357,149 - B158DRAFT_2209 0.84 -0.2 357,179 + B158DRAFT_2209 0.86 -0.2 357,179 + B158DRAFT_2209 0.86 -0.4 357,245 + B158DRAFT_2209 0.89 -0.4 357,280 - -0.2 357,288 + -0.3 357,369 + -0.1 357,371 + -0.1 357,377 - -0.4 357,379 - +0.4 357,443 - +0.1 357,460 - -0.2 357,490 + -0.5 357,490 + -0.2 357,498 - -0.3 357,584 + -0.1 357,584 + +0.5 357,591 + +0.2 357,591 + +0.1 357,648 + -0.4 357,648 + -1.2 357,648 + +0.2 357,648 + -0.4 357,648 + +0.1 357,648 + -0.2 357,648 + -0.6 357,656 - +0.0 357,656 - -0.7 357,656 - +0.4 357,656 - -0.1 357,656 - -0.8 357,656 - +0.2 357,656 - -0.1 357,656 - -0.0 357,777 + -0.1 357,777 + -0.2 357,793 + +0.3 357,826 + B158DRAFT_2210 0.11 +0.1 357,827 - B158DRAFT_2210 0.11 +0.1 357,827 - B158DRAFT_2210 0.11 +0.0 357,834 - B158DRAFT_2210 0.12 +0.5 357,862 - B158DRAFT_2210 0.15 +0.2 357,895 + B158DRAFT_2210 0.17 +0.1 358,011 + B158DRAFT_2210 0.27 -0.0 358,143 + B158DRAFT_2210 0.39 -0.1 358,149 - B158DRAFT_2210 0.39 -0.1 358,149 - B158DRAFT_2210 0.39 +0.6 358,204 - B158DRAFT_2210 0.44 -0.2 358,211 - B158DRAFT_2210 0.45 +0.4 358,231 - B158DRAFT_2210 0.46 -0.8 358,237 + B158DRAFT_2210 0.47 +0.4 358,239 - B158DRAFT_2210 0.47 -0.2 358,244 + B158DRAFT_2210 0.47 +0.0 358,244 + B158DRAFT_2210 0.47 -0.2 358,245 - B158DRAFT_2210 0.48 +0.3 358,252 - B158DRAFT_2210 0.48 -0.5 358,274 - B158DRAFT_2210 0.50 -0.1 358,333 + B158DRAFT_2210 0.55 +0.0 358,333 + B158DRAFT_2210 0.55 +0.1 358,333 + B158DRAFT_2210 0.55 +1.1 358,333 + B158DRAFT_2210 0.55 +0.5 358,354 + B158DRAFT_2210 0.57 -0.2 358,472 - B158DRAFT_2210 0.67 +0.0 358,512 - B158DRAFT_2210 0.71 -0.6 358,512 - B158DRAFT_2210 0.71 -0.1 358,517 - B158DRAFT_2210 0.71 -0.1 358,517 - B158DRAFT_2210 0.71 -0.2 358,517 - B158DRAFT_2210 0.71 +0.3 358,592 + B158DRAFT_2210 0.78 +0.1 358,605 - B158DRAFT_2210 0.79 -0.2 358,606 - B158DRAFT_2210 0.79 +0.2 358,614 + B158DRAFT_2210 0.79 -0.2 358,615 + B158DRAFT_2210 0.80 -0.0 358,622 - B158DRAFT_2210 0.80 +0.5 358,632 + B158DRAFT_2210 0.81 -0.7 358,632 - B158DRAFT_2210 0.81 -0.2 358,649 - B158DRAFT_2210 0.82 +0.1 358,715 - B158DRAFT_2210 0.88 +0.4 358,715 - B158DRAFT_2210 0.88 -0.3 358,723 - B158DRAFT_2210 0.89 -0.0 358,772 + +0.0 358,794 + -0.1 358,822 - -0.1 358,841 - +0.2 358,887 + -1.1 358,928 + -0.3 358,935 - B158DRAFT_2211 0.11 -0.3 359,038 + B158DRAFT_2211 0.26 +0.0 359,046 - B158DRAFT_2211 0.27 +0.1 359,051 - B158DRAFT_2211 0.28 -0.7 359,059 + B158DRAFT_2211 0.29 -0.8 359,065 + B158DRAFT_2211 0.30 +0.0 359,073 - B158DRAFT_2211 0.31 +0.5 359,095 + B158DRAFT_2211 0.35 +0.5 359,109 - B158DRAFT_2211 0.37 -0.0 359,128 + B158DRAFT_2211 0.40 -0.9 359,128 - B158DRAFT_2211 0.40 +0.1 359,128 - B158DRAFT_2211 0.40 -1.6 359,144 - B158DRAFT_2211 0.42 -0.0 359,224 + B158DRAFT_2211 0.54 -0.2 359,224 + B158DRAFT_2211 0.54 -0.2 359,224 + B158DRAFT_2211 0.54 +0.1 359,234 + B158DRAFT_2211 0.56 -0.4 359,242 - B158DRAFT_2211 0.57 +0.2 359,253 + B158DRAFT_2211 0.59 -0.2 359,259 - B158DRAFT_2211 0.59 +0.2 359,281 + B158DRAFT_2211 0.63 -0.1 359,302 - B158DRAFT_2211 0.66 +0.7 359,332 - B158DRAFT_2211 0.70 -0.3 359,333 - B158DRAFT_2211 0.71 +0.3 359,383 + B158DRAFT_2211 0.78 +0.1 359,425 + B158DRAFT_2211 0.84 -0.2 359,432 + B158DRAFT_2211 0.86 +0.1 359,455 + B158DRAFT_2211 0.89 -0.6 359,477 + -0.7 359,486 - -0.0 359,555 + -0.6 359,563 - -0.4 359,563 - -0.2 359,645 + -0.9 359,662 + -0.2 359,668 - -0.3 359,668 - -0.1 359,668 - +0.1 359,668 - +0.3 359,672 + -0.1 359,678 + +0.0 359,680 + -0.2 359,680 - -0.0 359,714 - -0.1 359,727 + B158DRAFT_2212 0.10 -0.2 359,729 + B158DRAFT_2212 0.11 -0.0 359,729 + B158DRAFT_2212 0.11 -0.1 359,729 + B158DRAFT_2212 0.11 +0.7 359,729 + B158DRAFT_2212 0.11 -0.0 359,737 - B158DRAFT_2212 0.11 -0.0 359,737 - B158DRAFT_2212 0.11 -0.3 359,785 + B158DRAFT_2212 0.13 -0.4 359,791 + B158DRAFT_2212 0.14 -0.4
Or see this region's nucleotide sequence