Experiment: m.b. acetate 300 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1732 and B158DRAFT_1733 are separated by 128 nucleotides B158DRAFT_1733 and B158DRAFT_1734 are separated by 179 nucleotides B158DRAFT_1734 and B158DRAFT_1735 are separated by 157 nucleotides
B158DRAFT_1732: B158DRAFT_1732 - C-terminal peptidase (prc), at 1,807,618 to 1,809,801
_1732
B158DRAFT_1733: B158DRAFT_1733 - hypothetical protein, at 1,809,930 to 1,810,226
_1733
B158DRAFT_1734: B158DRAFT_1734 - Acyl-CoA dehydrogenases, at 1,810,406 to 1,811,584
_1734
B158DRAFT_1735: B158DRAFT_1735 - Subtilisin-like serine proteases, at 1,811,742 to 1,814,204
_1735
Position (kb)
1810
1811
1812 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1809.428 kb on - strand, within B158DRAFT_1732 at 1809.463 kb on - strand, within B158DRAFT_1732 at 1809.463 kb on - strand, within B158DRAFT_1732 at 1809.501 kb on - strand, within B158DRAFT_1732 at 1809.587 kb on + strand at 1809.802 kb on + strand at 1809.802 kb on + strand at 1809.847 kb on + strand at 1809.882 kb on + strand at 1809.892 kb on + strand at 1809.892 kb on + strand at 1809.996 kb on - strand, within B158DRAFT_1733 at 1810.000 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.054 kb on + strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.062 kb on - strand, within B158DRAFT_1733 at 1810.082 kb on - strand, within B158DRAFT_1733 at 1810.151 kb on - strand, within B158DRAFT_1733 at 1810.180 kb on - strand, within B158DRAFT_1733 at 1810.212 kb on + strand at 1810.270 kb on - strand at 1810.307 kb on - strand at 1810.432 kb on + strand at 1810.488 kb on + strand at 1810.677 kb on + strand, within B158DRAFT_1734 at 1810.780 kb on + strand, within B158DRAFT_1734 at 1810.790 kb on + strand, within B158DRAFT_1734 at 1811.109 kb on + strand, within B158DRAFT_1734 at 1811.109 kb on + strand, within B158DRAFT_1734 at 1811.171 kb on - strand, within B158DRAFT_1734 at 1811.173 kb on + strand, within B158DRAFT_1734 at 1811.173 kb on + strand, within B158DRAFT_1734 at 1811.233 kb on + strand, within B158DRAFT_1734 at 1811.273 kb on + strand, within B158DRAFT_1734 at 1811.273 kb on + strand, within B158DRAFT_1734 at 1811.281 kb on - strand, within B158DRAFT_1734 at 1811.366 kb on + strand, within B158DRAFT_1734 at 1811.454 kb on - strand, within B158DRAFT_1734 at 1811.540 kb on + strand at 1811.553 kb on - strand at 1811.582 kb on - strand at 1811.669 kb on + strand at 1811.672 kb on - strand at 1811.672 kb on - strand at 1811.702 kb on + strand at 1811.713 kb on + strand at 1811.713 kb on + strand at 1811.713 kb on + strand at 1811.721 kb on - strand at 1811.733 kb on + strand at 1811.733 kb on + strand at 1811.733 kb on + strand at 1811.733 kb on + strand at 1811.733 kb on + strand at 1811.733 kb on + strand at 1811.733 kb on + strand at 1811.733 kb on + strand at 1811.741 kb on - strand at 1811.741 kb on - strand at 1811.741 kb on - strand at 1811.741 kb on - strand at 1811.741 kb on - strand at 1811.741 kb on - strand at 1811.741 kb on - strand at 1811.741 kb on - strand at 1811.741 kb on - strand at 1811.754 kb on + strand at 1811.754 kb on + strand at 1811.754 kb on + strand at 1811.766 kb on + strand at 1811.806 kb on + strand at 1811.806 kb on + strand at 1811.806 kb on + strand at 1811.806 kb on + strand at 1811.811 kb on + strand at 1811.814 kb on - strand at 1811.814 kb on - strand at 1811.814 kb on - strand at 1811.818 kb on + strand at 1811.850 kb on - strand at 1811.850 kb on - strand at 1811.850 kb on - strand at 1811.850 kb on - strand at 1811.850 kb on - strand at 1811.865 kb on - strand at 1811.885 kb on + strand at 1811.885 kb on + strand at 1811.885 kb on + strand at 1811.893 kb on - strand at 1811.893 kb on - strand at 1811.900 kb on + strand at 1811.908 kb on + strand at 1811.908 kb on + strand at 1811.908 kb on + strand at 1811.908 kb on + strand at 1811.908 kb on + strand at 1811.908 kb on - strand at 1811.908 kb on - strand at 1811.916 kb on - strand at 1811.916 kb on - strand at 1811.926 kb on - strand at 1811.926 kb on - strand at 1811.959 kb on + strand at 1811.991 kb on - strand, within B158DRAFT_1735 at 1812.041 kb on + strand, within B158DRAFT_1735 at 1812.067 kb on + strand, within B158DRAFT_1735 at 1812.075 kb on - strand, within B158DRAFT_1735 at 1812.128 kb on + strand, within B158DRAFT_1735 at 1812.128 kb on + strand, within B158DRAFT_1735 at 1812.128 kb on + strand, within B158DRAFT_1735 at 1812.128 kb on + strand, within B158DRAFT_1735 at 1812.128 kb on + strand, within B158DRAFT_1735 at 1812.128 kb on + strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.136 kb on - strand, within B158DRAFT_1735 at 1812.143 kb on + strand, within B158DRAFT_1735 at 1812.143 kb on + strand, within B158DRAFT_1735 at 1812.151 kb on - strand, within B158DRAFT_1735 at 1812.151 kb on - strand, within B158DRAFT_1735 at 1812.181 kb on + strand, within B158DRAFT_1735 at 1812.188 kb on + strand, within B158DRAFT_1735 at 1812.188 kb on + strand, within B158DRAFT_1735 at 1812.205 kb on + strand, within B158DRAFT_1735 at 1812.316 kb on - strand, within B158DRAFT_1735 at 1812.339 kb on - strand, within B158DRAFT_1735 at 1812.339 kb on - strand, within B158DRAFT_1735 at 1812.344 kb on - strand, within B158DRAFT_1735 at 1812.349 kb on - strand, within B158DRAFT_1735 at 1812.366 kb on - strand, within B158DRAFT_1735 at 1812.415 kb on - strand, within B158DRAFT_1735 at 1812.434 kb on - strand, within B158DRAFT_1735 at 1812.497 kb on + strand, within B158DRAFT_1735 at 1812.507 kb on - strand, within B158DRAFT_1735 at 1812.540 kb on - strand, within B158DRAFT_1735 at 1812.560 kb on - strand, within B158DRAFT_1735 at 1812.578 kb on - strand, within B158DRAFT_1735
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 300 mM remove 1,809,428 - B158DRAFT_1732 0.83 -4.9 1,809,463 - B158DRAFT_1732 0.84 -5.0 1,809,463 - B158DRAFT_1732 0.84 -3.8 1,809,501 - B158DRAFT_1732 0.86 -2.0 1,809,587 + -2.3 1,809,802 + -1.4 1,809,802 + -2.3 1,809,847 + -3.1 1,809,882 + -1.2 1,809,892 + -2.3 1,809,892 + -1.5 1,809,996 - B158DRAFT_1733 0.22 +0.1 1,810,000 + B158DRAFT_1733 0.24 -0.2 1,810,054 + B158DRAFT_1733 0.42 -0.8 1,810,054 + B158DRAFT_1733 0.42 -0.9 1,810,054 + B158DRAFT_1733 0.42 -0.2 1,810,054 + B158DRAFT_1733 0.42 -0.3 1,810,054 + B158DRAFT_1733 0.42 +0.0 1,810,054 + B158DRAFT_1733 0.42 -0.7 1,810,054 + B158DRAFT_1733 0.42 -0.5 1,810,054 + B158DRAFT_1733 0.42 -0.7 1,810,054 + B158DRAFT_1733 0.42 -0.7 1,810,054 + B158DRAFT_1733 0.42 -0.0 1,810,054 + B158DRAFT_1733 0.42 -1.1 1,810,054 + B158DRAFT_1733 0.42 -0.5 1,810,054 + B158DRAFT_1733 0.42 -0.5 1,810,054 + B158DRAFT_1733 0.42 -0.6 1,810,062 - B158DRAFT_1733 0.44 -1.5 1,810,062 - B158DRAFT_1733 0.44 +0.2 1,810,062 - B158DRAFT_1733 0.44 +0.1 1,810,062 - B158DRAFT_1733 0.44 +0.2 1,810,062 - B158DRAFT_1733 0.44 -0.5 1,810,062 - B158DRAFT_1733 0.44 -0.1 1,810,062 - B158DRAFT_1733 0.44 -0.4 1,810,062 - B158DRAFT_1733 0.44 -0.4 1,810,062 - B158DRAFT_1733 0.44 -0.2 1,810,062 - B158DRAFT_1733 0.44 -0.2 1,810,062 - B158DRAFT_1733 0.44 +0.2 1,810,062 - B158DRAFT_1733 0.44 -0.0 1,810,062 - B158DRAFT_1733 0.44 -0.2 1,810,082 - B158DRAFT_1733 0.51 -0.8 1,810,151 - B158DRAFT_1733 0.74 +0.1 1,810,180 - B158DRAFT_1733 0.84 -0.3 1,810,212 + -0.9 1,810,270 - -0.1 1,810,307 - +0.1 1,810,432 + -1.7 1,810,488 + -2.8 1,810,677 + B158DRAFT_1734 0.23 -1.6 1,810,780 + B158DRAFT_1734 0.32 -1.1 1,810,790 + B158DRAFT_1734 0.33 +0.2 1,811,109 + B158DRAFT_1734 0.60 -2.4 1,811,109 + B158DRAFT_1734 0.60 -0.7 1,811,171 - B158DRAFT_1734 0.65 -2.1 1,811,173 + B158DRAFT_1734 0.65 -2.0 1,811,173 + B158DRAFT_1734 0.65 -3.8 1,811,233 + B158DRAFT_1734 0.70 -1.0 1,811,273 + B158DRAFT_1734 0.74 -1.0 1,811,273 + B158DRAFT_1734 0.74 -2.3 1,811,281 - B158DRAFT_1734 0.74 -4.9 1,811,366 + B158DRAFT_1734 0.81 -0.1 1,811,454 - B158DRAFT_1734 0.89 -2.5 1,811,540 + -0.7 1,811,553 - -1.4 1,811,582 - -3.8 1,811,669 + -0.3 1,811,672 - -0.0 1,811,672 - -0.6 1,811,702 + -1.3 1,811,713 + -0.1 1,811,713 + +0.0 1,811,713 + +0.5 1,811,721 - -0.5 1,811,733 + +0.2 1,811,733 + +0.5 1,811,733 + -0.3 1,811,733 + +0.2 1,811,733 + -0.5 1,811,733 + -0.2 1,811,733 + +0.0 1,811,733 + -0.6 1,811,741 - +0.4 1,811,741 - +0.1 1,811,741 - -0.1 1,811,741 - +0.1 1,811,741 - +0.0 1,811,741 - +0.9 1,811,741 - -1.9 1,811,741 - -0.8 1,811,741 - +0.1 1,811,754 + +0.1 1,811,754 + +0.2 1,811,754 + +0.3 1,811,766 + -0.1 1,811,806 + -0.2 1,811,806 + -0.3 1,811,806 + -0.3 1,811,806 + +0.3 1,811,811 + -0.1 1,811,814 - +0.1 1,811,814 - -0.0 1,811,814 - -0.9 1,811,818 + +0.1 1,811,850 - -0.1 1,811,850 - +0.3 1,811,850 - -0.1 1,811,850 - -0.0 1,811,850 - -0.3 1,811,865 - +0.0 1,811,885 + -0.1 1,811,885 + +0.2 1,811,885 + +0.0 1,811,893 - -0.0 1,811,893 - -0.1 1,811,900 + -0.1 1,811,908 + +0.5 1,811,908 + -0.1 1,811,908 + -0.4 1,811,908 + -0.2 1,811,908 + +0.1 1,811,908 - -0.2 1,811,908 - -0.2 1,811,916 - -0.4 1,811,916 - +0.3 1,811,926 - -0.1 1,811,926 - -0.6 1,811,959 + +0.0 1,811,991 - B158DRAFT_1735 0.10 +0.3 1,812,041 + B158DRAFT_1735 0.12 +0.0 1,812,067 + B158DRAFT_1735 0.13 -0.3 1,812,075 - B158DRAFT_1735 0.14 -0.2 1,812,128 + B158DRAFT_1735 0.16 -0.2 1,812,128 + B158DRAFT_1735 0.16 +0.4 1,812,128 + B158DRAFT_1735 0.16 -0.1 1,812,128 + B158DRAFT_1735 0.16 -0.1 1,812,128 + B158DRAFT_1735 0.16 -0.5 1,812,128 + B158DRAFT_1735 0.16 +0.3 1,812,136 - B158DRAFT_1735 0.16 -0.1 1,812,136 - B158DRAFT_1735 0.16 +0.2 1,812,136 - B158DRAFT_1735 0.16 +0.1 1,812,136 - B158DRAFT_1735 0.16 -0.7 1,812,136 - B158DRAFT_1735 0.16 +0.1 1,812,136 - B158DRAFT_1735 0.16 -0.1 1,812,136 - B158DRAFT_1735 0.16 +0.0 1,812,136 - B158DRAFT_1735 0.16 -0.2 1,812,136 - B158DRAFT_1735 0.16 -0.6 1,812,143 + B158DRAFT_1735 0.16 -0.3 1,812,143 + B158DRAFT_1735 0.16 -0.1 1,812,151 - B158DRAFT_1735 0.17 -0.2 1,812,151 - B158DRAFT_1735 0.17 +0.3 1,812,181 + B158DRAFT_1735 0.18 -0.2 1,812,188 + B158DRAFT_1735 0.18 -0.7 1,812,188 + B158DRAFT_1735 0.18 +0.0 1,812,205 + B158DRAFT_1735 0.19 -0.5 1,812,316 - B158DRAFT_1735 0.23 -0.9 1,812,339 - B158DRAFT_1735 0.24 -0.0 1,812,339 - B158DRAFT_1735 0.24 -0.1 1,812,344 - B158DRAFT_1735 0.24 +0.4 1,812,349 - B158DRAFT_1735 0.25 +0.1 1,812,366 - B158DRAFT_1735 0.25 -0.2 1,812,415 - B158DRAFT_1735 0.27 -0.5 1,812,434 - B158DRAFT_1735 0.28 +0.1 1,812,497 + B158DRAFT_1735 0.31 -0.2 1,812,507 - B158DRAFT_1735 0.31 +0.1 1,812,540 - B158DRAFT_1735 0.32 +0.3 1,812,560 - B158DRAFT_1735 0.33 -0.1 1,812,578 - B158DRAFT_1735 0.34 -0.3
Or see this region's nucleotide sequence