Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1136

Experiment: m.b. acetate 300 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1135 and B158DRAFT_1136 are separated by 110 nucleotidesB158DRAFT_1136 and B158DRAFT_1137 are separated by 106 nucleotidesB158DRAFT_1137 and B158DRAFT_1138 overlap by 14 nucleotides B158DRAFT_1135: B158DRAFT_1135 - ATPase components of ABC transporters with duplicated ATPase domains, at 1,173,234 to 1,175,189 _1135 B158DRAFT_1136: B158DRAFT_1136 - Holliday junction DNA helicase subunit RuvB, at 1,175,300 to 1,176,319 _1136 B158DRAFT_1137: B158DRAFT_1137 - tol-pal system-associated acyl-CoA thioesterase, at 1,176,426 to 1,176,845 _1137 B158DRAFT_1138: B158DRAFT_1138 - Cell division and transport-associated protein TolQ (TC 2.C.1.2.1), at 1,176,832 to 1,177,545 _1138 Position (kb) 1175 1176 1177Strain fitness (log2 ratio) -3 -2 -1 0 1at 1174.307 kb on + strand, within B158DRAFT_1135at 1174.310 kb on - strand, within B158DRAFT_1135at 1174.348 kb on - strand, within B158DRAFT_1135at 1174.376 kb on + strand, within B158DRAFT_1135at 1174.376 kb on - strand, within B158DRAFT_1135at 1174.428 kb on - strand, within B158DRAFT_1135at 1174.475 kb on + strand, within B158DRAFT_1135at 1174.482 kb on - strand, within B158DRAFT_1135at 1174.482 kb on - strand, within B158DRAFT_1135at 1174.490 kb on + strand, within B158DRAFT_1135at 1174.497 kb on - strand, within B158DRAFT_1135at 1174.531 kb on - strand, within B158DRAFT_1135at 1174.531 kb on - strand, within B158DRAFT_1135at 1174.587 kb on + strand, within B158DRAFT_1135at 1174.594 kb on - strand, within B158DRAFT_1135at 1174.625 kb on + strand, within B158DRAFT_1135at 1174.715 kb on + strand, within B158DRAFT_1135at 1174.723 kb on - strand, within B158DRAFT_1135at 1174.736 kb on + strand, within B158DRAFT_1135at 1174.744 kb on - strand, within B158DRAFT_1135at 1174.744 kb on - strand, within B158DRAFT_1135at 1174.775 kb on + strand, within B158DRAFT_1135at 1174.783 kb on - strand, within B158DRAFT_1135at 1174.783 kb on - strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.822 kb on + strand, within B158DRAFT_1135at 1174.926 kb on + strand, within B158DRAFT_1135at 1174.926 kb on + strand, within B158DRAFT_1135at 1174.934 kb on - strand, within B158DRAFT_1135at 1174.934 kb on - strand, within B158DRAFT_1135at 1174.934 kb on - strand, within B158DRAFT_1135at 1174.968 kb on + strand, within B158DRAFT_1135at 1174.969 kb on - strand, within B158DRAFT_1135at 1174.969 kb on - strand, within B158DRAFT_1135at 1174.969 kb on - strand, within B158DRAFT_1135at 1175.026 kb on + strandat 1175.026 kb on + strandat 1175.034 kb on - strandat 1175.035 kb on - strandat 1175.047 kb on + strandat 1175.062 kb on + strandat 1175.091 kb on + strandat 1175.103 kb on + strandat 1175.103 kb on + strandat 1175.110 kb on + strandat 1175.110 kb on + strandat 1175.110 kb on + strandat 1175.111 kb on - strandat 1175.118 kb on - strandat 1175.118 kb on - strandat 1175.118 kb on - strandat 1175.118 kb on - strandat 1175.142 kb on + strandat 1175.148 kb on - strandat 1175.259 kb on + strandat 1175.283 kb on + strandat 1175.459 kb on + strand, within B158DRAFT_1136at 1175.479 kb on - strand, within B158DRAFT_1136at 1175.564 kb on - strand, within B158DRAFT_1136at 1175.564 kb on - strand, within B158DRAFT_1136at 1175.564 kb on - strand, within B158DRAFT_1136at 1175.564 kb on - strand, within B158DRAFT_1136at 1175.565 kb on - strand, within B158DRAFT_1136at 1175.607 kb on + strand, within B158DRAFT_1136at 1175.607 kb on + strand, within B158DRAFT_1136at 1175.607 kb on + strand, within B158DRAFT_1136at 1175.610 kb on - strand, within B158DRAFT_1136at 1175.615 kb on - strand, within B158DRAFT_1136at 1175.615 kb on - strand, within B158DRAFT_1136at 1175.615 kb on - strand, within B158DRAFT_1136at 1175.615 kb on - strand, within B158DRAFT_1136at 1175.627 kb on - strand, within B158DRAFT_1136at 1175.649 kb on + strand, within B158DRAFT_1136at 1175.657 kb on - strand, within B158DRAFT_1136at 1175.682 kb on - strand, within B158DRAFT_1136at 1175.795 kb on + strand, within B158DRAFT_1136at 1175.795 kb on + strand, within B158DRAFT_1136at 1175.795 kb on + strand, within B158DRAFT_1136at 1175.795 kb on + strand, within B158DRAFT_1136at 1175.831 kb on + strand, within B158DRAFT_1136at 1175.831 kb on + strand, within B158DRAFT_1136at 1175.839 kb on - strand, within B158DRAFT_1136at 1175.839 kb on - strand, within B158DRAFT_1136at 1176.060 kb on - strand, within B158DRAFT_1136at 1176.077 kb on + strand, within B158DRAFT_1136at 1176.085 kb on - strand, within B158DRAFT_1136at 1176.116 kb on + strand, within B158DRAFT_1136at 1176.134 kb on + strand, within B158DRAFT_1136at 1176.134 kb on + strand, within B158DRAFT_1136at 1176.142 kb on - strand, within B158DRAFT_1136at 1176.246 kb on - strandat 1176.428 kb on - strandat 1176.623 kb on + strand, within B158DRAFT_1137

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. acetate 300 mM
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1,174,307 + B158DRAFT_1135 0.55 -0.1
1,174,310 - B158DRAFT_1135 0.55 -0.6
1,174,348 - B158DRAFT_1135 0.57 +0.2
1,174,376 + B158DRAFT_1135 0.58 -0.2
1,174,376 - B158DRAFT_1135 0.58 -0.2
1,174,428 - B158DRAFT_1135 0.61 +0.2
1,174,475 + B158DRAFT_1135 0.63 +0.1
1,174,482 - B158DRAFT_1135 0.64 +0.1
1,174,482 - B158DRAFT_1135 0.64 +0.1
1,174,490 + B158DRAFT_1135 0.64 -0.2
1,174,497 - B158DRAFT_1135 0.65 -0.4
1,174,531 - B158DRAFT_1135 0.66 -0.4
1,174,531 - B158DRAFT_1135 0.66 +0.5
1,174,587 + B158DRAFT_1135 0.69 -0.0
1,174,594 - B158DRAFT_1135 0.70 -0.2
1,174,625 + B158DRAFT_1135 0.71 +0.3
1,174,715 + B158DRAFT_1135 0.76 -0.8
1,174,723 - B158DRAFT_1135 0.76 -0.2
1,174,736 + B158DRAFT_1135 0.77 -0.0
1,174,744 - B158DRAFT_1135 0.77 -0.1
1,174,744 - B158DRAFT_1135 0.77 +0.2
1,174,775 + B158DRAFT_1135 0.79 +0.0
1,174,783 - B158DRAFT_1135 0.79 +0.2
1,174,783 - B158DRAFT_1135 0.79 -0.4
1,174,790 + B158DRAFT_1135 0.80 +0.1
1,174,790 + B158DRAFT_1135 0.80 -0.3
1,174,790 + B158DRAFT_1135 0.80 -0.5
1,174,790 + B158DRAFT_1135 0.80 -0.2
1,174,790 + B158DRAFT_1135 0.80 -0.2
1,174,798 - B158DRAFT_1135 0.80 -0.3
1,174,798 - B158DRAFT_1135 0.80 +0.0
1,174,798 - B158DRAFT_1135 0.80 +1.0
1,174,798 - B158DRAFT_1135 0.80 -0.0
1,174,798 - B158DRAFT_1135 0.80 -0.1
1,174,822 + B158DRAFT_1135 0.81 -0.1
1,174,926 + B158DRAFT_1135 0.87 -0.0
1,174,926 + B158DRAFT_1135 0.87 -0.2
1,174,934 - B158DRAFT_1135 0.87 -0.5
1,174,934 - B158DRAFT_1135 0.87 +0.1
1,174,934 - B158DRAFT_1135 0.87 -0.0
1,174,968 + B158DRAFT_1135 0.89 +0.1
1,174,969 - B158DRAFT_1135 0.89 -0.6
1,174,969 - B158DRAFT_1135 0.89 -0.1
1,174,969 - B158DRAFT_1135 0.89 +0.5
1,175,026 + +0.1
1,175,026 + -0.1
1,175,034 - -0.3
1,175,035 - -0.2
1,175,047 + +0.7
1,175,062 + -0.2
1,175,091 + -0.0
1,175,103 + -0.4
1,175,103 + +0.3
1,175,110 + -0.2
1,175,110 + -0.5
1,175,110 + +0.1
1,175,111 - -0.3
1,175,118 - +0.5
1,175,118 - -0.9
1,175,118 - -0.0
1,175,118 - -0.3
1,175,142 + +0.2
1,175,148 - +0.1
1,175,259 + -2.0
1,175,283 + -1.5
1,175,459 + B158DRAFT_1136 0.16 -1.0
1,175,479 - B158DRAFT_1136 0.18 -1.4
1,175,564 - B158DRAFT_1136 0.26 -2.8
1,175,564 - B158DRAFT_1136 0.26 -2.0
1,175,564 - B158DRAFT_1136 0.26 -2.9
1,175,564 - B158DRAFT_1136 0.26 +1.5
1,175,565 - B158DRAFT_1136 0.26 -1.1
1,175,607 + B158DRAFT_1136 0.30 -2.0
1,175,607 + B158DRAFT_1136 0.30 -2.1
1,175,607 + B158DRAFT_1136 0.30 -1.9
1,175,610 - B158DRAFT_1136 0.30 -2.7
1,175,615 - B158DRAFT_1136 0.31 -0.2
1,175,615 - B158DRAFT_1136 0.31 -0.7
1,175,615 - B158DRAFT_1136 0.31 -3.0
1,175,615 - B158DRAFT_1136 0.31 -0.7
1,175,627 - B158DRAFT_1136 0.32 -0.8
1,175,649 + B158DRAFT_1136 0.34 -2.3
1,175,657 - B158DRAFT_1136 0.35 -1.4
1,175,682 - B158DRAFT_1136 0.37 -2.0
1,175,795 + B158DRAFT_1136 0.49 -3.1
1,175,795 + B158DRAFT_1136 0.49 +0.7
1,175,795 + B158DRAFT_1136 0.49 -0.8
1,175,795 + B158DRAFT_1136 0.49 -2.2
1,175,831 + B158DRAFT_1136 0.52 -2.6
1,175,831 + B158DRAFT_1136 0.52 +0.3
1,175,839 - B158DRAFT_1136 0.53 -0.9
1,175,839 - B158DRAFT_1136 0.53 -2.2
1,176,060 - B158DRAFT_1136 0.75 -2.0
1,176,077 + B158DRAFT_1136 0.76 -2.5
1,176,085 - B158DRAFT_1136 0.77 -1.7
1,176,116 + B158DRAFT_1136 0.80 -3.0
1,176,134 + B158DRAFT_1136 0.82 +0.1
1,176,134 + B158DRAFT_1136 0.82 -2.0
1,176,142 - B158DRAFT_1136 0.83 +0.0
1,176,246 - -0.2
1,176,428 - -0.5
1,176,623 + B158DRAFT_1137 0.47 -1.8

Or see this region's nucleotide sequence