Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1170

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
1,299,947	+		PfGW456L13_1169	0.63	-0.9
1,299,947	+		PfGW456L13_1169	0.63	-1.2
1,299,948	-		PfGW456L13_1169	0.63	-0.5
1,300,003	+		PfGW456L13_1169	0.65	-0.9
1,300,124	+		PfGW456L13_1169	0.70	-0.8
1,300,124	+		PfGW456L13_1169	0.70	-1.0
1,300,124	+		PfGW456L13_1169	0.70	+0.1
1,300,124	+		PfGW456L13_1169	0.70	-1.5
1,300,125	-		PfGW456L13_1169	0.70	-1.4
1,300,125	-		PfGW456L13_1169	0.70	-0.1
1,300,125	-		PfGW456L13_1169	0.70	+1.2
1,300,125	-		PfGW456L13_1169	0.70	-1.6
1,300,125	-		PfGW456L13_1169	0.70	+0.2
1,300,366	+		PfGW456L13_1169	0.80	-2.1
1,300,491	+		PfGW456L13_1169	0.85	-0.3
1,300,491	+		PfGW456L13_1169	0.85	-0.7
1,300,491	+		PfGW456L13_1169	0.85	-0.9
1,300,491	+		PfGW456L13_1169	0.85	-1.8
1,300,491	+		PfGW456L13_1169	0.85	-0.4
1,300,491	+		PfGW456L13_1169	0.85	-1.1
1,300,492	-		PfGW456L13_1169	0.85	-1.6
1,300,492	-		PfGW456L13_1169	0.85	-1.1
1,300,492	-		PfGW456L13_1169	0.85	-1.4
1,300,565	+		PfGW456L13_1169	0.88	-0.1
1,300,565	+		PfGW456L13_1169	0.88	-2.2
1,300,565	+		PfGW456L13_1169	0.88	-1.9
1,300,566	-		PfGW456L13_1169	0.88	-0.4
1,300,566	-		PfGW456L13_1169	0.88	-0.5
1,300,566	-		PfGW456L13_1169	0.88	-0.6
1,300,598	-		PfGW456L13_1169	0.90	-1.4
1,300,598	-		PfGW456L13_1169	0.90	-1.0
1,300,622	+				-1.3
1,300,622	+				-0.5
1,300,622	+				-2.3
1,300,622	+				-0.6
1,300,622	+				-1.8
1,300,623	-				-1.1
1,300,762	+				-0.3
1,300,763	-				-1.7
1,300,907	-				+0.8
1,300,934	-				-0.6
1,301,086	+		PfGW456L13_1170	0.25	-1.3
1,301,086	+		PfGW456L13_1170	0.25	-2.9
1,301,087	-		PfGW456L13_1170	0.26	-3.4
1,301,087	-		PfGW456L13_1170	0.26	-0.9
1,301,087	-		PfGW456L13_1170	0.26	-3.1
1,301,087	-		PfGW456L13_1170	0.26	-1.4
1,301,087	-		PfGW456L13_1170	0.26	-2.1
1,301,087	-		PfGW456L13_1170	0.26	-3.0
1,301,087	-		PfGW456L13_1170	0.26	-1.2
1,301,095	+		PfGW456L13_1170	0.27	-2.7
1,301,095	+		PfGW456L13_1170	0.27	-1.5
1,301,095	+		PfGW456L13_1170	0.27	-1.9
1,301,096	-		PfGW456L13_1170	0.27	-0.8
1,301,096	-		PfGW456L13_1170	0.27	-2.8
1,301,096	-		PfGW456L13_1170	0.27	-2.7
1,301,096	-		PfGW456L13_1170	0.27	-3.6
1,301,104	+		PfGW456L13_1170	0.28	-1.4
1,301,104	+		PfGW456L13_1170	0.28	-2.4
1,301,104	+		PfGW456L13_1170	0.28	-0.4
1,301,104	+		PfGW456L13_1170	0.28	-1.6
1,301,104	+		PfGW456L13_1170	0.28	-3.3
1,301,105	-		PfGW456L13_1170	0.28	-0.5
1,301,105	-		PfGW456L13_1170	0.28	-2.3
1,301,105	-		PfGW456L13_1170	0.28	-1.3
1,301,105	-		PfGW456L13_1170	0.28	-0.6
1,301,105	-		PfGW456L13_1170	0.28	-3.1
1,301,105	-		PfGW456L13_1170	0.28	-2.3
1,301,105	-		PfGW456L13_1170	0.28	+0.4
1,301,246	-		PfGW456L13_1170	0.46	-0.8
1,301,357	-		PfGW456L13_1170	0.59	-3.4
1,301,404	+		PfGW456L13_1170	0.65	-0.3
1,301,404	+		PfGW456L13_1170	0.65	-1.8
1,301,404	+		PfGW456L13_1170	0.65	-2.4
1,301,404	+		PfGW456L13_1170	0.65	-1.1
1,301,405	-		PfGW456L13_1170	0.66	-2.8
1,301,405	-		PfGW456L13_1170	0.66	-4.2
1,301,405	-		PfGW456L13_1170	0.66	-1.5
1,301,405	-		PfGW456L13_1170	0.66	-1.6
1,301,441	-		PfGW456L13_1170	0.70	-4.8
1,301,441	-		PfGW456L13_1170	0.70	-2.6
1,301,503	+		PfGW456L13_1170	0.78	-3.0
1,301,503	+		PfGW456L13_1170	0.78	-1.1
1,301,503	+		PfGW456L13_1170	0.78	-2.1
1,301,503	+		PfGW456L13_1170	0.78	-3.7
1,301,503	+		PfGW456L13_1170	0.78	-2.8
1,301,503	+		PfGW456L13_1170	0.78	-1.5
1,301,504	-		PfGW456L13_1170	0.78	-0.6
1,301,504	-		PfGW456L13_1170	0.78	-2.4
1,301,545	+		PfGW456L13_1170	0.83	-2.2
1,301,545	+		PfGW456L13_1170	0.83	-2.1
1,301,546	-		PfGW456L13_1170	0.83	-1.0
1,301,546	-		PfGW456L13_1170	0.83	-2.5
1,301,671	-				-0.8
1,301,692	+				-1.9
1,301,692	+				-2.5
1,301,693	-				-1.1
1,301,693	-				+0.5
1,301,911	+		PfGW456L13_1171	0.13	-4.4
1,301,911	+		PfGW456L13_1171	0.13	-3.4
1,301,911	+		PfGW456L13_1171	0.13	-3.5
1,301,911	+		PfGW456L13_1171	0.13	-0.4
1,301,911	+		PfGW456L13_1171	0.13	-2.9
1,301,911	+		PfGW456L13_1171	0.13	-2.2
1,301,911	+		PfGW456L13_1171	0.13	-0.6
1,301,911	+		PfGW456L13_1171	0.13	-3.5
1,301,911	+		PfGW456L13_1171	0.13	-2.8
1,301,911	+		PfGW456L13_1171	0.13	-2.4
1,301,912	-		PfGW456L13_1171	0.13	-3.8
1,301,912	-		PfGW456L13_1171	0.13	-3.3
1,301,912	-		PfGW456L13_1171	0.13	-2.8
1,301,912	-		PfGW456L13_1171	0.13	-2.3
1,301,912	-		PfGW456L13_1171	0.13	-3.5
1,301,912	-		PfGW456L13_1171	0.13	-2.3
1,301,926	+		PfGW456L13_1171	0.14	-3.3
1,301,927	-		PfGW456L13_1171	0.14	-2.6
1,302,040	+		PfGW456L13_1171	0.21	-3.1
1,302,127	+		PfGW456L13_1171	0.26	-3.3
1,302,128	-		PfGW456L13_1171	0.26	-2.9
1,302,175	+		PfGW456L13_1171	0.29	-2.4
1,302,175	+		PfGW456L13_1171	0.29	-3.1
1,302,175	+		PfGW456L13_1171	0.29	-2.1
1,302,175	+		PfGW456L13_1171	0.29	-4.6
1,302,175	+		PfGW456L13_1171	0.29	-2.5
1,302,175	+		PfGW456L13_1171	0.29	-1.8
1,302,175	+		PfGW456L13_1171	0.29	-1.5
1,302,175	+		PfGW456L13_1171	0.29	-3.2
1,302,176	-		PfGW456L13_1171	0.29	-3.8
1,302,176	-		PfGW456L13_1171	0.29	-0.6
1,302,176	-		PfGW456L13_1171	0.29	-3.3
1,302,176	-		PfGW456L13_1171	0.29	-0.4
1,302,176	-		PfGW456L13_1171	0.29	-2.2
1,302,176	-		PfGW456L13_1171	0.29	-3.6
1,302,295	+		PfGW456L13_1171	0.36	-3.8
1,302,295	+		PfGW456L13_1171	0.36	-3.2
1,302,295	+		PfGW456L13_1171	0.36	-0.4
1,302,295	+		PfGW456L13_1171	0.36	-3.8
1,302,296	-		PfGW456L13_1171	0.36	-3.5
1,302,296	-		PfGW456L13_1171	0.36	-3.4
1,302,296	-		PfGW456L13_1171	0.36	-2.7
1,302,296	-		PfGW456L13_1171	0.36	-3.3