Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3923

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,698,398	+		Echvi_3921	0.79	+1.3
4,698,399	-		Echvi_3921	0.79	-0.7
4,698,405	+		Echvi_3921	0.79	+1.0
4,698,434	+		Echvi_3921	0.80	-1.1
4,698,434	+		Echvi_3921	0.80	-0.1
4,698,435	-		Echvi_3921	0.80	-0.5
4,698,453	-		Echvi_3921	0.80	-1.1
4,698,467	+		Echvi_3921	0.81	+0.8
4,698,468	-		Echvi_3921	0.81	+0.4
4,698,546	+		Echvi_3921	0.83	-0.8
4,698,546	+		Echvi_3921	0.83	-0.2
4,698,546	+		Echvi_3921	0.83	+0.3
4,698,547	-		Echvi_3921	0.83	+1.2
4,698,547	-		Echvi_3921	0.83	+0.5
4,698,547	-		Echvi_3921	0.83	-1.0
4,698,587	-		Echvi_3921	0.84	-2.3
4,698,603	+		Echvi_3921	0.84	-2.0
4,698,604	-		Echvi_3921	0.84	-1.1
4,698,662	+		Echvi_3921	0.86	+0.5
4,698,744	+		Echvi_3921	0.88	-2.2
4,698,744	+		Echvi_3921	0.88	+2.1
4,698,744	+		Echvi_3921	0.88	+0.3
4,698,744	+		Echvi_3921	0.88	-0.7
4,698,745	-		Echvi_3921	0.88	-0.2
4,698,745	-		Echvi_3921	0.88	-0.2
4,698,758	-		Echvi_3921	0.89	-0.0
4,698,805	+				-0.3
4,698,805	+				-1.7
4,698,806	-				+0.3
4,698,806	-				+0.2
4,698,806	-				+1.8
4,698,806	-				-1.0
4,698,809	+				+0.5
4,698,922	-				+0.5
4,698,922	-				-0.1
4,698,942	-				-0.5
4,698,975	-				+0.0
4,699,018	+				-0.5
4,699,018	+				+0.5
4,699,018	+				+1.7
4,699,018	+				-0.2
4,699,018	+				-0.9
4,699,018	+				-0.5
4,699,019	-				+3.7
4,699,019	-				-0.4
4,699,019	-				+1.1
4,699,019	-				-1.1
4,699,019	-				-1.1
4,699,019	-				+0.1
4,699,062	+				-1.9
4,699,108	+				+0.1
4,699,108	+				-1.3
4,699,152	-				-0.7
4,699,155	+				+1.2
4,699,156	-				+0.8
4,699,156	-				-0.2
4,699,171	-				+0.8
4,699,174	+				-0.1
4,699,230	-		Echvi_3922	0.13	+0.7
4,699,308	+				+0.5
4,699,308	+				+0.0
4,699,327	+				-1.4
4,699,378	+				-1.0
4,699,435	+		Echvi_3923	0.13	+1.3
4,699,436	-		Echvi_3923	0.13	+1.9
4,699,454	+		Echvi_3923	0.15	-0.2
4,699,468	+		Echvi_3923	0.16	-0.6
4,699,500	+		Echvi_3923	0.19	+0.1
4,699,509	+		Echvi_3923	0.20	-3.1
4,699,512	+		Echvi_3923	0.20	-0.2
4,699,512	+		Echvi_3923	0.20	+1.2
4,699,512	+		Echvi_3923	0.20	+0.6
4,699,512	+		Echvi_3923	0.20	-0.2
4,699,513	-		Echvi_3923	0.21	+2.3
4,699,513	-		Echvi_3923	0.21	+1.3
4,699,513	-		Echvi_3923	0.21	+1.3
4,699,542	-		Echvi_3923	0.23	+2.0
4,699,563	+		Echvi_3923	0.25	+0.2
4,699,563	+		Echvi_3923	0.25	-0.0
4,699,563	+		Echvi_3923	0.25	+0.2
4,699,563	+		Echvi_3923	0.25	+0.7
4,699,566	+		Echvi_3923	0.26	-1.3
4,699,577	+		Echvi_3923	0.27	-0.2
4,699,577	+		Echvi_3923	0.27	-1.3
4,699,578	-		Echvi_3923	0.27	+2.7
4,699,599	+		Echvi_3923	0.29	+1.4
4,699,599	+		Echvi_3923	0.29	-0.1
4,699,599	+		Echvi_3923	0.29	+0.2
4,699,599	+		Echvi_3923	0.29	-0.6
4,699,600	-		Echvi_3923	0.29	+1.5
4,699,603	+		Echvi_3923	0.29	+0.0
4,699,604	-		Echvi_3923	0.29	+1.5
4,699,604	-		Echvi_3923	0.29	+2.2
4,699,611	+		Echvi_3923	0.30	+0.4
4,699,612	-		Echvi_3923	0.30	+1.2
4,699,633	-		Echvi_3923	0.32	+1.4
4,699,651	-		Echvi_3923	0.34	+1.5
4,699,663	+		Echvi_3923	0.35	+1.0
4,699,752	+		Echvi_3923	0.44	-0.2
4,699,753	-		Echvi_3923	0.44	+1.9
4,699,753	-		Echvi_3923	0.44	+1.7
4,699,770	+		Echvi_3923	0.45	-1.2
4,699,869	+		Echvi_3923	0.55	-0.9
4,699,870	-		Echvi_3923	0.55	+1.8
4,699,870	-		Echvi_3923	0.55	+1.0
4,699,886	+		Echvi_3923	0.57	-2.0
4,699,888	+		Echvi_3923	0.57	+3.7
4,699,889	-		Echvi_3923	0.57	+2.7
4,699,904	-		Echvi_3923	0.58	+2.7
4,699,998	+		Echvi_3923	0.67	-0.6
4,699,998	+		Echvi_3923	0.67	+0.5
4,699,998	+		Echvi_3923	0.67	+0.9
4,699,998	+		Echvi_3923	0.67	+0.6
4,699,999	-		Echvi_3923	0.68	+1.2
4,699,999	-		Echvi_3923	0.68	+1.4
4,699,999	-		Echvi_3923	0.68	-0.2
4,699,999	-		Echvi_3923	0.68	+0.5
4,700,051	+		Echvi_3923	0.73	-0.0
4,700,135	-		Echvi_3923	0.81	+0.8
4,700,135	-		Echvi_3923	0.81	+1.7
4,700,135	-		Echvi_3923	0.81	+1.2
4,700,210	+		Echvi_3923	0.88	-1.0
4,700,210	+		Echvi_3923	0.88	-0.6
4,700,210	+				+0.5
4,700,211	-		Echvi_3923	0.88	+2.1
4,700,270	-				+0.9
4,700,270	-				-1.0
4,700,317	+				+0.3
4,700,319	+				+0.7
4,700,320	-				-0.3
4,700,320	-				+1.3
4,700,353	-				+1.4
4,700,353	-				+1.1
4,700,359	-				+1.6
4,700,359	-				+1.2
4,700,374	-				+1.6
4,700,490	+				+0.5
4,700,544	+				-0.6
4,700,569	+				+0.1
4,700,594	+				+0.1
4,700,616	+		Echvi_3924	0.12	+0.2
4,700,623	+		Echvi_3924	0.13	+0.1
4,700,623	+		Echvi_3924	0.13	+0.2
4,700,659	-		Echvi_3924	0.19	+3.2
4,700,795	+		Echvi_3924	0.43	+0.6
4,700,796	-		Echvi_3924	0.43	+1.5
4,700,861	-		Echvi_3924	0.55	+2.1
4,700,861	-		Echvi_3924	0.55	+1.0
4,700,864	+		Echvi_3924	0.55	-0.2
4,700,864	+		Echvi_3924	0.55	+0.9
4,700,865	-		Echvi_3924	0.55	+1.3
4,700,867	+		Echvi_3924	0.56	-0.7
4,700,887	-		Echvi_3924	0.59	-0.3
4,701,038	+		Echvi_3924	0.85	+0.6
4,701,038	+		Echvi_3924	0.85	+1.3
4,701,038	+		Echvi_3924	0.85	-0.3
4,701,038	+		Echvi_3924	0.85	-0.3
4,701,038	+		Echvi_3924	0.85	-0.2
4,701,038	+		Echvi_3924	0.85	-1.0
4,701,039	-		Echvi_3924	0.85	+1.3
4,701,039	-		Echvi_3924	0.85	+0.4
4,701,044	-		Echvi_3924	0.86	+1.9
4,701,044	-		Echvi_3924	0.86	-0.3
4,701,068	-				+1.5
4,701,092	+				+0.1
4,701,093	-				-0.2
4,701,093	-				+0.4
4,701,100	+				-1.6
4,701,155	+				-1.8
4,701,159	-				+1.9
4,701,159	-				+0.0
4,701,169	+				-0.8
4,701,176	-				+0.7
4,701,199	-				+0.5
4,701,201	+				-0.6
4,701,201	+				+0.4
4,701,202	-				+1.5
4,701,224	-				+2.1
4,701,244	+				+0.0
4,701,245	-				+0.1
4,701,271	+				-0.7
4,701,272	-				+1.7
4,701,274	+				-1.2
4,701,274	+				-0.1
4,701,275	-				+1.4
4,701,275	-				-1.3
4,701,275	-				-0.3
4,701,294	+				-1.7
4,701,326	+				-0.3