Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3651

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,338,449	-				-1.2
4,338,474	-				+0.4
4,338,501	+				-0.7
4,338,537	-				-1.8
4,338,551	+				+1.1
4,338,552	-				+1.4
4,338,557	+				+1.1
4,338,557	+				+0.2
4,338,557	+				+0.5
4,338,557	+				-0.2
4,338,558	-				+0.4
4,338,558	-				-0.7
4,338,582	+				+0.5
4,338,589	+				-0.5
4,338,589	+				+2.5
4,338,597	+				-2.5
4,338,603	-				-1.0
4,338,603	-				-3.2
4,338,605	+				-0.5
4,338,606	-				-2.9
4,338,678	+		Echvi_3650	0.12	-1.8
4,338,686	-		Echvi_3650	0.14	-2.9
4,338,742	-		Echvi_3650	0.21	-2.3
4,338,742	-		Echvi_3650	0.21	-4.8
4,338,779	+		Echvi_3650	0.26	-0.5
4,338,779	+		Echvi_3650	0.26	-2.3
4,338,797	-		Echvi_3650	0.28	+0.3
4,338,821	+		Echvi_3650	0.31	-1.3
4,338,822	-		Echvi_3650	0.31	+0.5
4,338,822	-		Echvi_3650	0.31	+0.0
4,338,839	+		Echvi_3650	0.34	-2.8
4,338,875	+		Echvi_3650	0.38	-3.8
4,338,875	+		Echvi_3650	0.38	-2.7
4,338,876	-		Echvi_3650	0.38	-1.8
4,338,876	-		Echvi_3650	0.38	-0.7
4,338,878	-		Echvi_3650	0.39	+0.1
4,338,964	-		Echvi_3650	0.50	-1.9
4,338,964	-		Echvi_3650	0.50	-1.0
4,338,969	+		Echvi_3650	0.51	-1.5
4,338,970	-		Echvi_3650	0.51	+0.2
4,339,093	+		Echvi_3650	0.67	-3.5
4,339,094	-		Echvi_3650	0.67	-0.2
4,339,094	-		Echvi_3650	0.67	-2.0
4,339,095	+		Echvi_3650	0.67	-2.0
4,339,095	+		Echvi_3650	0.67	-3.2
4,339,095	+		Echvi_3650	0.67	-1.9
4,339,095	+		Echvi_3650	0.67	-3.6
4,339,095	+		Echvi_3650	0.67	-2.6
4,339,096	-		Echvi_3650	0.67	-2.7
4,339,096	-		Echvi_3650	0.67	+0.3
4,339,096	-		Echvi_3650	0.67	-1.2
4,339,096	-		Echvi_3650	0.67	-3.0
4,339,100	+		Echvi_3650	0.68	-2.6
4,339,125	+		Echvi_3650	0.71	-2.1
4,339,126	-		Echvi_3650	0.71	-3.4
4,339,201	-		Echvi_3650	0.81	-1.8
4,339,224	-		Echvi_3650	0.84	-2.0
4,339,224	-		Echvi_3650	0.84	-1.6
4,339,271	-				-1.5
4,339,316	-				-2.8
4,339,316	-				-1.6
4,339,346	-				-0.0
4,339,346	-				+0.0
4,339,385	-				-0.6
4,339,405	+				+0.5
4,339,405	+				-1.1
4,339,406	-				-2.9
4,339,418	-				-2.9
4,339,449	+		Echvi_3651	0.16	+0.5
4,339,450	-		Echvi_3651	0.16	-2.5
4,339,450	-		Echvi_3651	0.16	-0.2
4,339,471	+		Echvi_3651	0.21	-1.3
4,339,486	+		Echvi_3651	0.25	-0.2
4,339,498	+		Echvi_3651	0.28	+1.5
4,339,498	+		Echvi_3651	0.28	-0.2
4,339,498	+		Echvi_3651	0.28	-1.1
4,339,501	+		Echvi_3651	0.29	-2.1
4,339,502	-		Echvi_3651	0.29	-2.3
4,339,511	+		Echvi_3651	0.31	-0.7
4,339,511	+		Echvi_3651	0.31	-1.7
4,339,565	-		Echvi_3651	0.44	+1.1
4,339,567	-		Echvi_3651	0.45	-2.3
4,339,567	-		Echvi_3651	0.45	-0.2
4,339,606	+		Echvi_3651	0.55	+0.1
4,339,618	+		Echvi_3651	0.58	+1.1
4,339,619	-		Echvi_3651	0.58	-1.3
4,339,620	+		Echvi_3651	0.58	-1.4
4,339,620	+		Echvi_3651	0.58	-1.0
4,339,620	+		Echvi_3651	0.58	+1.0
4,339,620	+		Echvi_3651	0.58	+0.8
4,339,621	-		Echvi_3651	0.58	-2.7
4,339,621	-		Echvi_3651	0.58	+0.5
4,339,621	-		Echvi_3651	0.58	-1.7
4,339,621	-		Echvi_3651	0.58	-1.2
4,339,621	-		Echvi_3651	0.58	-2.7
4,339,651	+		Echvi_3651	0.66	-1.5
4,339,680	+		Echvi_3651	0.73	+0.3
4,339,776	+				+0.3
4,339,776	+				-0.5
4,339,776	+				+0.9
4,339,805	+				-0.9
4,339,806	-				-0.3
4,339,815	-				-2.5
4,339,853	+				-2.4
4,339,854	-		Echvi_3652	0.10	-1.6
4,339,854	-		Echvi_3652	0.10	-0.5
4,339,870	+		Echvi_3652	0.12	-2.2
4,339,871	-		Echvi_3652	0.13	-4.3
4,339,964	-		Echvi_3652	0.26	-1.5
4,340,036	+		Echvi_3652	0.37	-3.1
4,340,040	+		Echvi_3652	0.38	-2.3
4,340,060	+		Echvi_3652	0.41	-1.9
4,340,074	+		Echvi_3652	0.43	-0.6
4,340,075	-		Echvi_3652	0.43	+1.1
4,340,076	+		Echvi_3652	0.43	-2.9
4,340,076	+		Echvi_3652	0.43	-1.0
4,340,076	+		Echvi_3652	0.43	+2.1
4,340,122	-		Echvi_3652	0.50	-2.5
4,340,128	-		Echvi_3652	0.51	-3.6
4,340,161	-		Echvi_3652	0.56	-2.2
4,340,190	-		Echvi_3652	0.60	-0.7
4,340,202	+		Echvi_3652	0.62	-1.3
4,340,203	-		Echvi_3652	0.62	-0.1
4,340,203	-		Echvi_3652	0.62	-2.9
4,340,203	-		Echvi_3652	0.62	-2.3
4,340,204	+		Echvi_3652	0.62	-2.7
4,340,204	+		Echvi_3652	0.62	-3.1
4,340,204	+		Echvi_3652	0.62	-0.7
4,340,205	-		Echvi_3652	0.62	-2.3
4,340,205	-		Echvi_3652	0.62	-0.9
4,340,205	-		Echvi_3652	0.62	-0.7
4,340,205	-		Echvi_3652	0.62	-2.7
4,340,205	-		Echvi_3652	0.62	-3.7
4,340,247	+		Echvi_3652	0.69	-1.9
4,340,248	-		Echvi_3652	0.69	-0.2
4,340,267	+		Echvi_3652	0.72	-1.8
4,340,267	+		Echvi_3652	0.72	+0.5
4,340,268	-		Echvi_3652	0.72	-2.3
4,340,268	-		Echvi_3652	0.72	-4.5
4,340,350	+		Echvi_3652	0.84	-0.9
4,340,350	+		Echvi_3652	0.84	-0.6
4,340,351	-		Echvi_3652	0.84	+0.5
4,340,368	+		Echvi_3652	0.87	-1.7
4,340,369	-		Echvi_3652	0.87	-2.3
4,340,374	-		Echvi_3652	0.88	-1.8
4,340,374	-		Echvi_3652	0.88	-2.0
4,340,381	+		Echvi_3652	0.89	-0.6
4,340,398	-				+0.5
4,340,434	+				-2.3
4,340,435	-				-2.4
4,340,435	-				-2.7
4,340,463	-				-2.5
4,340,463	-				-2.0
4,340,463	-				-1.7
4,340,464	+				-3.0
4,340,464	+				-1.5
4,340,465	-				+0.1
4,340,465	-				-0.8
4,340,465	-				-3.0
4,340,465	-				-1.4
4,340,465	-				-0.2
4,340,482	+				-4.5
4,340,703	+		Echvi_3653	0.29	-2.6
4,340,719	-		Echvi_3653	0.30	-1.5
4,340,783	+		Echvi_3653	0.38	-2.3