Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3251

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
3,855,833	+				+0.1
3,855,834	-				-2.5
3,855,839	+				+0.2
3,855,840	-				-0.3
3,855,961	-		Echvi_3250	0.21	-0.9
3,856,025	-		Echvi_3250	0.27	-0.3
3,856,028	+		Echvi_3250	0.28	-0.5
3,856,028	+		Echvi_3250	0.28	-1.6
3,856,028	+		Echvi_3250	0.28	+1.1
3,856,028	+		Echvi_3250	0.28	+0.4
3,856,028	+		Echvi_3250	0.28	-0.3
3,856,028	+		Echvi_3250	0.28	+0.2
3,856,028	+		Echvi_3250	0.28	+0.3
3,856,029	-		Echvi_3250	0.28	-0.3
3,856,030	+		Echvi_3250	0.28	+2.0
3,856,043	+		Echvi_3250	0.29	-0.8
3,856,044	-		Echvi_3250	0.29	-0.7
3,856,073	+		Echvi_3250	0.32	-0.4
3,856,076	+		Echvi_3250	0.32	+0.5
3,856,185	+		Echvi_3250	0.43	-2.3
3,856,185	+		Echvi_3250	0.43	+0.7
3,856,186	-		Echvi_3250	0.43	-0.3
3,856,196	+		Echvi_3250	0.44	-1.5
3,856,227	+		Echvi_3250	0.47	-1.9
3,856,227	+		Echvi_3250	0.47	-0.9
3,856,227	+		Echvi_3250	0.47	-0.6
3,856,227	+		Echvi_3250	0.47	-0.9
3,856,228	-		Echvi_3250	0.47	+0.3
3,856,228	-		Echvi_3250	0.47	+1.1
3,856,244	-		Echvi_3250	0.48	+1.4
3,856,248	-		Echvi_3250	0.49	+0.0
3,856,362	+		Echvi_3250	0.60	+0.2
3,856,420	-		Echvi_3250	0.65	+0.3
3,856,442	+		Echvi_3250	0.67	-0.5
3,856,442	+		Echvi_3250	0.67	+0.9
3,856,442	+		Echvi_3250	0.67	-0.1
3,856,442	+		Echvi_3250	0.67	-0.4
3,856,443	-		Echvi_3250	0.67	+0.5
3,856,444	+		Echvi_3250	0.68	+0.2
3,856,505	+		Echvi_3250	0.73	+1.6
3,856,505	+		Echvi_3250	0.73	-0.3
3,856,528	-		Echvi_3250	0.76	+0.7
3,856,529	+		Echvi_3250	0.76	-1.0
3,856,529	+		Echvi_3250	0.76	-0.9
3,856,530	-		Echvi_3250	0.76	+1.3
3,856,530	-		Echvi_3250	0.76	+1.3
3,856,564	+		Echvi_3250	0.79	+1.1
3,856,575	+		Echvi_3250	0.80	-0.5
3,856,576	-		Echvi_3250	0.80	-1.2
3,856,576	-		Echvi_3250	0.80	-0.1
3,856,576	-		Echvi_3250	0.80	-0.4
3,856,576	-		Echvi_3250	0.80	+0.0
3,856,610	+		Echvi_3250	0.83	-1.6
3,856,610	+		Echvi_3250	0.83	-1.0
3,856,611	-		Echvi_3250	0.84	-1.3
3,856,614	+		Echvi_3250	0.84	+1.5
3,856,641	-		Echvi_3250	0.86	-1.1
3,856,641	-		Echvi_3250	0.86	-0.7
3,856,641	-		Echvi_3250	0.86	+0.2
3,856,641	-		Echvi_3250	0.86	-0.5
3,856,642	+		Echvi_3250	0.87	+0.7
3,856,682	+				-0.6
3,856,682	+				-0.2
3,856,682	+				-0.2
3,856,682	+				-0.2
3,856,682	+				+0.7
3,856,682	+				+0.4
3,856,682	+				+0.7
3,856,683	-				+1.2
3,856,683	-				-0.8
3,856,684	+				-0.6
3,856,684	+				-1.2
3,856,684	+				+0.0
3,856,684	+				+0.1
3,856,685	-				-0.5
3,856,685	-				-0.1
3,856,740	+				-0.0
3,856,755	-				-1.2
3,856,816	-				-0.5
3,856,816	-				+1.1
3,856,867	+				+1.2
3,856,868	-				+0.0
3,856,880	+		Echvi_3251	0.11	-0.9
3,856,883	-		Echvi_3251	0.11	+0.3
3,856,883	-		Echvi_3251	0.11	-0.0
3,856,883	-		Echvi_3251	0.11	-0.3
3,856,910	+		Echvi_3251	0.15	+0.5
3,856,914	+		Echvi_3251	0.15	+1.4
3,856,915	-		Echvi_3251	0.16	-0.7
3,856,927	+		Echvi_3251	0.17	-0.5
3,856,928	-		Echvi_3251	0.17	-0.4
3,856,928	-		Echvi_3251	0.17	-0.4
3,856,930	+		Echvi_3251	0.18	-0.5
3,857,028	-		Echvi_3251	0.31	-1.6
3,857,028	-		Echvi_3251	0.31	-0.9
3,857,035	+		Echvi_3251	0.32	+0.0
3,857,036	-		Echvi_3251	0.32	-0.2
3,857,040	+		Echvi_3251	0.33	-0.8
3,857,041	-		Echvi_3251	0.33	+0.2
3,857,056	-		Echvi_3251	0.35	-1.1
3,857,058	+		Echvi_3251	0.35	-0.4
3,857,058	+		Echvi_3251	0.35	-0.6
3,857,059	-		Echvi_3251	0.35	+0.0
3,857,060	+		Echvi_3251	0.35	-1.8
3,857,060	+		Echvi_3251	0.35	-0.1
3,857,060	+		Echvi_3251	0.35	+0.0
3,857,060	+		Echvi_3251	0.35	+0.0
3,857,060	+		Echvi_3251	0.35	+1.0
3,857,061	-		Echvi_3251	0.35	+1.3
3,857,061	-		Echvi_3251	0.35	-2.1
3,857,061	-		Echvi_3251	0.35	+0.4
3,857,061	-		Echvi_3251	0.35	+0.2
3,857,061	-		Echvi_3251	0.35	-0.7
3,857,118	+		Echvi_3251	0.43	-0.7
3,857,118	+		Echvi_3251	0.43	-1.4
3,857,118	+		Echvi_3251	0.43	+0.9
3,857,118	+		Echvi_3251	0.43	-0.2
3,857,157	+		Echvi_3251	0.48	+0.2
3,857,158	-		Echvi_3251	0.49	-0.2
3,857,158	-		Echvi_3251	0.49	-0.8
3,857,159	+		Echvi_3251	0.49	+0.9
3,857,160	-		Echvi_3251	0.49	+0.4
3,857,160	-		Echvi_3251	0.49	+0.8
3,857,191	-		Echvi_3251	0.53	-1.5
3,857,202	-		Echvi_3251	0.54	-0.3
3,857,232	+		Echvi_3251	0.59	+0.1
3,857,232	+		Echvi_3251	0.59	-0.2
3,857,233	-		Echvi_3251	0.59	-1.3
3,857,239	+		Echvi_3251	0.59	-0.5
3,857,240	-		Echvi_3251	0.60	-1.9
3,857,292	+		Echvi_3251	0.67	-1.3
3,857,292	+		Echvi_3251	0.67	+0.2
3,857,293	-		Echvi_3251	0.67	+0.1
3,857,293	-		Echvi_3251	0.67	+0.4
3,857,293	-		Echvi_3251	0.67	-0.3
3,857,293	-		Echvi_3251	0.67	-1.0
3,857,293	-		Echvi_3251	0.67	-0.9
3,857,298	+		Echvi_3251	0.67	-1.5
3,857,299	-		Echvi_3251	0.68	-0.1
3,857,327	-		Echvi_3251	0.71	-2.5
3,857,364	-		Echvi_3251	0.76	+1.7
3,857,457	-		Echvi_3251	0.89	-0.7
3,857,457	-		Echvi_3251	0.89	-1.9
3,857,461	-		Echvi_3251	0.90	-0.3
3,857,478	-				+2.6
3,857,484	+				-0.9
3,857,485	-				-0.8
3,857,485	-				-0.3
3,857,523	+				-0.5
3,857,549	+				-2.2
3,857,600	-				-0.3
3,857,604	+				-0.5
3,857,613	-				-0.5
3,857,620	-				+0.3
3,857,622	-				-0.6
3,857,665	-				+0.5
3,857,743	-		Echvi_3252	0.19	-0.8
3,857,860	+		Echvi_3252	0.37	+1.6
3,857,861	-		Echvi_3252	0.37	+0.2
3,857,861	-		Echvi_3252	0.37	+0.9
3,857,873	+		Echvi_3252	0.39	+0.5
3,857,917	+		Echvi_3252	0.46	+0.1
3,857,935	-		Echvi_3252	0.49	-1.7
3,857,935	-		Echvi_3252	0.49	-1.9
3,857,935	-		Echvi_3252	0.49	-0.2
3,857,935	-		Echvi_3252	0.49	+0.7
3,857,938	+		Echvi_3252	0.49	-0.5
3,857,966	-		Echvi_3252	0.53	+0.2
3,857,978	-		Echvi_3252	0.55	-1.1
3,857,990	-		Echvi_3252	0.57	+1.0
3,858,120	-		Echvi_3252	0.77	-0.1
3,858,244	+				+0.4
3,858,282	+				-1.5
3,858,282	+				-2.1
3,858,287	-				-0.2
3,858,327	-				-0.7
3,858,327	-				+0.5
3,858,333	-				-0.1
3,858,333	-				+1.1
3,858,440	+		Echvi_3253	0.18	+0.5
3,858,462	+		Echvi_3253	0.20	-0.1
3,858,462	+		Echvi_3253	0.20	-2.6
3,858,481	+		Echvi_3253	0.23	-0.5
3,858,482	-		Echvi_3253	0.23	+0.1
3,858,523	+		Echvi_3253	0.28	+0.9
3,858,532	+		Echvi_3253	0.29	-1.7
3,858,533	-		Echvi_3253	0.29	+0.5