Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2414

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,858,096	+		Echvi_2413	0.65	-2.8
2,858,096	+		Echvi_2413	0.65	+1.4
2,858,096	+		Echvi_2413	0.65	+0.6
2,858,096	+		Echvi_2413	0.65	-1.7
2,858,096	+		Echvi_2413	0.65	-2.9
2,858,096	+		Echvi_2413	0.65	-0.7
2,858,096	+				+0.4
2,858,097	-		Echvi_2413	0.65	+0.7
2,858,097	-		Echvi_2413	0.65	-1.4
2,858,097	-		Echvi_2413	0.65	+0.5
2,858,097	-		Echvi_2413	0.65	-0.5
2,858,097	-		Echvi_2413	0.65	+2.2
2,858,097	-		Echvi_2413	0.65	+0.1
2,858,097	-		Echvi_2413	0.65	-1.1
2,858,097	-		Echvi_2413	0.65	+0.8
2,858,097	-		Echvi_2413	0.65	+0.2
2,858,097	-		Echvi_2413	0.65	+1.1
2,858,130	+		Echvi_2413	0.67	+0.3
2,858,131	-		Echvi_2413	0.67	-0.6
2,858,160	-		Echvi_2413	0.68	+1.5
2,858,183	+		Echvi_2413	0.69	+0.4
2,858,183	+		Echvi_2413	0.69	-0.3
2,858,214	-		Echvi_2413	0.70	+0.4
2,858,312	+		Echvi_2413	0.75	-1.7
2,858,314	+		Echvi_2413	0.75	-2.2
2,858,314	+		Echvi_2413	0.75	-0.2
2,858,315	-		Echvi_2413	0.75	-0.5
2,858,315	-		Echvi_2413	0.75	-0.4
2,858,315	-		Echvi_2413	0.75	-2.7
2,858,353	-		Echvi_2413	0.76	+0.1
2,858,353	-		Echvi_2413	0.76	+0.9
2,858,383	+		Echvi_2413	0.78	-1.2
2,858,433	+		Echvi_2413	0.80	+0.9
2,858,433	+		Echvi_2413	0.80	+0.0
2,858,434	-		Echvi_2413	0.80	-0.1
2,858,436	-		Echvi_2413	0.80	-0.1
2,858,436	-		Echvi_2413	0.80	+0.7
2,858,436	-		Echvi_2413	0.80	+0.4
2,858,463	-		Echvi_2413	0.81	+0.2
2,858,519	-		Echvi_2413	0.83	-0.3
2,858,524	+		Echvi_2413	0.83	-0.1
2,858,557	+		Echvi_2413	0.85	-0.9
2,858,557	+		Echvi_2413	0.85	-2.0
2,858,557	+		Echvi_2413	0.85	+0.9
2,858,558	-		Echvi_2413	0.85	+0.3
2,858,558	-		Echvi_2413	0.85	-2.5
2,858,584	+		Echvi_2413	0.86	-1.1
2,858,593	+		Echvi_2413	0.86	-0.4
2,858,593	+		Echvi_2413	0.86	-0.1
2,858,644	+		Echvi_2413	0.89	-1.9
2,858,670	-		Echvi_2413	0.90	+1.9
2,858,728	-				+2.9
2,858,836	+				+0.6
2,858,837	-				-0.1
2,858,837	-				-2.1
2,858,837	-				-0.1
2,858,860	+				+0.9
2,858,902	-				-0.6
2,858,902	-				+3.5
2,858,905	-				-0.9
2,858,917	+				-0.9
2,858,918	-				+0.5
2,858,918	-				+1.2
2,858,931	+				+1.0
2,858,931	+				-1.5
2,858,933	+				+0.3
2,858,933	+				+0.8
2,858,934	-				-1.0
2,858,934	-				+2.2
2,859,058	+				-0.8
2,859,068	+				-1.3
2,859,068	+				-1.0
2,859,068	+				+0.8
2,859,069	-				+1.8
2,859,069	-				-2.4
2,859,069	-				-0.2
2,859,069	-				-1.1
2,859,069	-				-0.2
2,859,069	-				+0.9
2,859,072	+				-2.6
2,859,072	+				-1.0
2,859,078	+				-0.5
2,859,078	+				-0.0
2,859,078	+				+0.7
2,859,079	-				-0.0
2,859,092	+				-1.6
2,859,135	+				-0.4
2,859,196	+				-0.9
2,859,197	-				-0.4
2,859,197	-				+0.1
2,859,197	-				+0.1
2,859,197	-				+1.8
2,859,200	+				+1.5
2,859,209	-				+1.2
2,859,210	+				+0.3
2,859,211	-				+1.4
2,859,344	+		Echvi_2414	0.11	+2.0
2,859,344	+		Echvi_2414	0.11	-1.4
2,859,345	-		Echvi_2414	0.11	+0.8
2,859,345	-		Echvi_2414	0.11	+0.2
2,859,466	+		Echvi_2414	0.17	+0.9
2,859,467	-		Echvi_2414	0.17	-1.0
2,859,467	-		Echvi_2414	0.17	+0.1
2,859,467	-		Echvi_2414	0.17	-2.3
2,859,476	-		Echvi_2414	0.17	+0.7
2,859,515	-		Echvi_2414	0.19	+1.0
2,859,535	+		Echvi_2414	0.20	+0.9
2,859,536	-		Echvi_2414	0.20	+0.9
2,859,542	+		Echvi_2414	0.20	+0.2
2,859,542	+		Echvi_2414	0.20	-0.9
2,859,542	+		Echvi_2414	0.20	+0.1
2,859,543	-		Echvi_2414	0.20	-0.3
2,859,543	-		Echvi_2414	0.20	+0.3
2,859,543	-		Echvi_2414	0.20	-1.5
2,859,543	-		Echvi_2414	0.20	-0.1
2,859,543	-		Echvi_2414	0.20	+1.1
2,859,544	+		Echvi_2414	0.20	-1.0
2,859,544	+		Echvi_2414	0.20	+0.5
2,859,544	+		Echvi_2414	0.20	+0.9
2,859,545	-		Echvi_2414	0.20	-1.7
2,859,545	-		Echvi_2414	0.20	-1.3
2,859,545	-		Echvi_2414	0.20	-0.0
2,859,545	-		Echvi_2414	0.20	+0.7
2,859,545	-		Echvi_2414	0.20	+0.1
2,859,545	-		Echvi_2414	0.20	+0.7
2,859,586	+		Echvi_2414	0.22	+0.9
2,859,588	+		Echvi_2414	0.22	-0.5
2,859,588	+		Echvi_2414	0.22	-0.4
2,859,589	-		Echvi_2414	0.22	+0.1
2,859,589	-		Echvi_2414	0.22	-1.2
2,859,671	+		Echvi_2414	0.26	+0.8
2,859,671	+		Echvi_2414	0.26	+1.2
2,859,672	-		Echvi_2414	0.26	+1.6
2,859,688	-		Echvi_2414	0.27	-1.7
2,859,688	-		Echvi_2414	0.27	-0.3
2,859,688	-		Echvi_2414	0.27	+0.0
2,859,688	-		Echvi_2414	0.27	-1.7
2,859,688	-		Echvi_2414	0.27	-2.8
2,859,690	+		Echvi_2414	0.27	-1.0
2,859,690	+		Echvi_2414	0.27	+0.7
2,859,740	+		Echvi_2414	0.29	+0.3
2,859,773	+		Echvi_2414	0.30	-2.3
2,859,773	+		Echvi_2414	0.30	+1.6
2,859,774	-		Echvi_2414	0.30	-1.8
2,860,054	+		Echvi_2414	0.43	+1.6
2,860,071	+		Echvi_2414	0.44	-0.7
2,860,071	+		Echvi_2414	0.44	-1.0
2,860,071	+		Echvi_2414	0.44	+0.5
2,860,072	-		Echvi_2414	0.44	+0.1
2,860,185	+		Echvi_2414	0.49	+0.6
2,860,186	-		Echvi_2414	0.49	+1.5
2,860,231	-		Echvi_2414	0.51	-0.3
2,860,231	-		Echvi_2414	0.51	-1.7
2,860,267	+		Echvi_2414	0.52	-0.2
2,860,267	+		Echvi_2414	0.52	-2.6
2,860,304	+		Echvi_2414	0.54	-0.4
2,860,304	+		Echvi_2414	0.54	+0.0
2,860,320	+		Echvi_2414	0.55	-0.9
2,860,320	+		Echvi_2414	0.55	-0.2
2,860,321	-		Echvi_2414	0.55	+0.3
2,860,355	+		Echvi_2414	0.56	+0.1
2,860,355	+		Echvi_2414	0.56	+0.1
2,860,355	+		Echvi_2414	0.56	+0.0
2,860,364	-		Echvi_2414	0.57	-1.0
2,860,386	+		Echvi_2414	0.58	-0.1
2,860,400	-		Echvi_2414	0.58	+2.2
2,860,465	+		Echvi_2414	0.61	+0.2
2,860,465	+		Echvi_2414	0.61	-0.6
2,860,466	-		Echvi_2414	0.61	-1.5
2,860,466	-		Echvi_2414	0.61	+0.1
2,860,468	-		Echvi_2414	0.61	-2.1
2,860,534	-		Echvi_2414	0.64	-0.1
2,860,534	-		Echvi_2414	0.64	-0.6
2,860,580	-		Echvi_2414	0.66	+0.5
2,860,600	+		Echvi_2414	0.67	-1.3
2,860,600	+		Echvi_2414	0.67	+1.1
2,860,601	-		Echvi_2414	0.67	+2.7
2,860,601	-		Echvi_2414	0.67	-0.1
2,860,612	+		Echvi_2414	0.68	+0.5
2,860,623	+		Echvi_2414	0.68	-1.0
2,860,624	-		Echvi_2414	0.68	+0.7
2,860,624	-		Echvi_2414	0.68	+1.4
2,860,677	+		Echvi_2414	0.71	+0.9
2,860,693	-		Echvi_2414	0.72	+0.1
2,860,713	+		Echvi_2414	0.72	+1.2
2,860,736	-		Echvi_2414	0.73	-0.3
2,860,737	+		Echvi_2414	0.74	-1.0
2,860,737	+		Echvi_2414	0.74	-0.3
2,860,760	+		Echvi_2414	0.75	-1.0
2,860,820	+		Echvi_2414	0.77	+0.6
2,860,885	+		Echvi_2414	0.80	+1.3
2,860,886	-		Echvi_2414	0.80	-0.5
2,860,886	-		Echvi_2414	0.80	+0.9
2,860,921	+		Echvi_2414	0.82	-1.9
2,860,922	-		Echvi_2414	0.82	+1.2
2,860,933	+		Echvi_2414	0.82	+0.8
2,860,933	+		Echvi_2414	0.82	+1.6
2,860,937	+		Echvi_2414	0.82	+0.3
2,860,937	+		Echvi_2414	0.82	+0.3
2,860,937	+		Echvi_2414	0.82	-0.3
2,860,938	-		Echvi_2414	0.83	+0.3
2,860,973	-		Echvi_2414	0.84	-1.6
2,860,973	-		Echvi_2414	0.84	-0.1
2,860,975	-		Echvi_2414	0.84	+0.6
2,860,975	-		Echvi_2414	0.84	-0.0
2,860,989	-		Echvi_2414	0.85	-1.3
2,861,013	-		Echvi_2414	0.86	-1.7
2,861,102	-		Echvi_2414	0.90	-0.8
2,861,102	-		Echvi_2414	0.90	+0.3
2,861,123	+				+0.7
2,861,124	-				-0.8
2,861,200	+				+0.4
2,861,201	-				+1.5
2,861,201	-				-1.5
2,861,201	-				-1.9
2,861,201	-				-0.1
2,861,234	-				-3.6
2,861,283	-				+1.4
2,861,316	+				+0.3
2,861,316	+				-0.4
2,861,336	+				-1.5
2,861,352	+				-1.6
2,861,359	+				+1.3
2,861,359	+				+0.6
2,861,630	+				-1.3
2,861,744	-				+0.6
2,861,791	+				+0.4
2,861,969	+				-0.4
2,861,970	-				-1.7
2,862,011	+		Echvi_2415	0.11	+2.7
2,862,012	-		Echvi_2415	0.11	+1.0
2,862,053	+		Echvi_2415	0.12	-0.1
2,862,107	+		Echvi_2415	0.14	+0.5
2,862,180	-		Echvi_2415	0.17	+0.9
2,862,227	+		Echvi_2415	0.18	-0.9
2,862,253	+		Echvi_2415	0.19	+0.6
2,862,255	+		Echvi_2415	0.19	-0.3
2,862,256	-		Echvi_2415	0.19	+0.6
2,862,256	-		Echvi_2415	0.19	+0.1
2,862,285	-		Echvi_2415	0.20	+0.8
2,862,314	+		Echvi_2415	0.21	-0.9
2,862,314	+		Echvi_2415	0.21	-2.4