Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2406

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,847,759	+		Echvi_2405	0.66	-1.1
2,847,760	-		Echvi_2405	0.66	+0.5
2,847,773	+		Echvi_2405	0.67	-0.1
2,847,853	-		Echvi_2405	0.73	+0.5
2,847,869	+		Echvi_2405	0.74	+2.3
2,847,960	+		Echvi_2405	0.80	+0.6
2,847,970	-		Echvi_2405	0.81	+0.8
2,847,996	-		Echvi_2405	0.83	-0.2
2,848,015	-		Echvi_2405	0.84	+0.4
2,848,057	+		Echvi_2405	0.87	-0.1
2,848,057	+		Echvi_2405	0.87	-2.1
2,848,106	-				+0.7
2,848,129	+				-1.1
2,848,194	-				-0.5
2,848,209	-				+0.4
2,848,209	-				+0.7
2,848,209	-				+0.2
2,848,209	-				-2.1
2,848,212	-				-1.3
2,848,220	+				+0.2
2,848,231	-				-0.4
2,848,231	-				-0.4
2,848,231	-				+1.1
2,848,269	+				+1.0
2,848,283	+				-0.4
2,848,284	-				+0.5
2,848,284	-				+1.2
2,848,303	+				-0.6
2,848,304	-				+0.0
2,848,304	-				+0.5
2,848,305	+				+0.9
2,848,305	+				+0.5
2,848,306	-				+0.6
2,848,313	-				+0.0
2,848,314	+				-1.3
2,848,314	+				+0.7
2,848,315	-				+0.0
2,848,321	-				+2.0
2,848,321	-				+0.7
2,848,325	+				+0.2
2,848,325	+				-1.5
2,848,326	-				+0.0
2,848,326	-				-1.2
2,848,326	-				+0.5
2,848,326	-				-2.5
2,848,329	-				+0.2
2,848,330	+				+1.5
2,848,330	+				-0.4
2,848,377	+				+0.7
2,848,380	+				-1.3
2,848,381	-				+0.2
2,848,381	-				+0.2
2,848,381	-				+0.0
2,848,391	-				+0.0
2,848,392	+				-1.0
2,848,473	+				-0.8
2,848,473	+				-0.1
2,848,473	+				+1.8
2,848,473	+				+1.3
2,848,474	-				+0.3
2,848,474	-				-0.3
2,848,474	-				-0.1
2,848,476	+				+1.7
2,848,508	+				-3.0
2,848,566	+				+0.3
2,848,567	-				-1.0
2,848,569	+				-1.0
2,848,569	+				+1.4
2,848,570	-				-0.4
2,848,570	-				+0.6
2,848,570	-				-1.2
2,848,589	-				-0.7
2,848,614	+				+0.6
2,848,675	+				-1.3
2,848,676	-				-0.8
2,848,676	-				+1.0
2,848,676	-				-1.2
2,848,676	-				-1.2
2,848,676	-				+0.4
2,848,692	+				+1.1
2,848,692	+				+0.4
2,848,696	+				-1.6
2,848,696	+				+0.8
2,848,697	-				-0.8
2,848,723	+				+0.2
2,848,724	-				-0.1
2,848,726	+				+0.3
2,848,727	-				+0.3
2,848,741	+				+0.2
2,848,741	+				+1.0
2,848,741	+				-0.2
2,848,741	+				+0.0
2,848,741	+				-2.6
2,848,742	-				-0.2
2,848,742	-				-0.5
2,848,743	+				+1.3
2,848,743	+				+0.5
2,848,743	+				-0.6
2,848,743	+				-0.3
2,848,744	-				-0.1
2,848,744	-				-0.8
2,848,787	+				+0.4
2,848,790	+				-0.4
2,848,807	-				+0.2
2,848,815	-				-1.8
2,848,815	-				+0.3
2,848,914	-		Echvi_2406	0.16	+0.3
2,848,914	-		Echvi_2406	0.16	+1.2
2,849,088	+		Echvi_2406	0.31	+0.0
2,849,124	-		Echvi_2406	0.34	-0.0
2,849,149	+		Echvi_2406	0.36	-0.2
2,849,150	-		Echvi_2406	0.36	+2.1
2,849,172	-		Echvi_2406	0.38	-0.4
2,849,172	-		Echvi_2406	0.38	-0.1
2,849,175	-		Echvi_2406	0.39	+0.6
2,849,175	-		Echvi_2406	0.39	-0.3
2,849,181	+		Echvi_2406	0.39	-1.8
2,849,181	+		Echvi_2406	0.39	-0.3
2,849,181	+		Echvi_2406	0.39	-1.5
2,849,181	+		Echvi_2406	0.39	-0.3
2,849,182	-		Echvi_2406	0.39	+0.1
2,849,220	-		Echvi_2406	0.43	-0.4
2,849,287	-		Echvi_2406	0.48	-0.5
2,849,291	-		Echvi_2406	0.49	-0.1
2,849,291	-		Echvi_2406	0.49	+0.7
2,849,334	+		Echvi_2406	0.53	-0.2
2,849,335	-		Echvi_2406	0.53	+0.6
2,849,335	-		Echvi_2406	0.53	+0.4
2,849,339	+		Echvi_2406	0.53	-0.4
2,849,340	-		Echvi_2406	0.53	+0.3
2,849,342	-		Echvi_2406	0.53	+1.9
2,849,342	-		Echvi_2406	0.53	-2.0
2,849,342	-				+3.0
2,849,343	+		Echvi_2406	0.53	-1.3
2,849,343	+		Echvi_2406	0.53	-0.2
2,849,343	+		Echvi_2406	0.53	-2.0
2,849,344	-		Echvi_2406	0.53	-0.3
2,849,344	-		Echvi_2406	0.53	-0.3
2,849,344	-		Echvi_2406	0.53	-0.6
2,849,344	-		Echvi_2406	0.53	-2.3
2,849,344	-		Echvi_2406	0.53	+0.2
2,849,400	+		Echvi_2406	0.58	-0.2
2,849,400	+		Echvi_2406	0.58	-0.3
2,849,403	-		Echvi_2406	0.59	-0.9
2,849,405	+		Echvi_2406	0.59	-1.5
2,849,467	-		Echvi_2406	0.64	-1.7
2,849,594	+		Echvi_2406	0.75	-0.8
2,849,594	+		Echvi_2406	0.75	-0.8
2,849,594	+		Echvi_2406	0.75	-0.1
2,849,595	-		Echvi_2406	0.76	+1.7
2,849,595	-		Echvi_2406	0.76	-0.1
2,849,595	-		Echvi_2406	0.76	-0.4
2,849,610	-		Echvi_2406	0.77	-0.4
2,849,636	+		Echvi_2406	0.79	+0.3
2,849,636	+		Echvi_2406	0.79	-1.0
2,849,636	+		Echvi_2406	0.79	-0.6
2,849,658	+		Echvi_2406	0.81	+1.1
2,849,672	+		Echvi_2406	0.82	-1.7
2,849,739	-		Echvi_2406	0.88	+0.5
2,849,739	-		Echvi_2406	0.88	+0.4
2,849,813	+				+1.2
2,849,870	-				-1.1
2,849,939	+				+0.7
2,849,940	-				+0.6
2,849,983	+				-0.3
2,849,984	-				+0.8
2,850,004	+				-2.2
2,850,005	-				+0.6
2,850,005	-				+0.0
2,850,005	-				-1.0
2,850,005	-				-0.7
2,850,007	+				+0.1
2,850,007	+				-0.6
2,850,007	+				-2.0
2,850,008	-				-1.1
2,850,008	-				+0.0
2,850,046	+				-0.4
2,850,098	+				-0.2
2,850,099	-				-0.1
2,850,103	+				-0.2
2,850,276	+		Echvi_2407	0.23	+1.6
2,850,276	+		Echvi_2407	0.23	-2.7
2,850,291	-		Echvi_2407	0.25	-0.8
2,850,291	-		Echvi_2407	0.25	+1.5
2,850,291	-		Echvi_2407	0.25	-1.9
2,850,293	+		Echvi_2407	0.25	+0.9
2,850,463	+		Echvi_2407	0.47	-1.9
2,850,463	+		Echvi_2407	0.47	+0.4
2,850,464	-		Echvi_2407	0.47	+1.3
2,850,546	+		Echvi_2407	0.57	-1.0
2,850,546	+		Echvi_2407	0.57	-0.1
2,850,579	-		Echvi_2407	0.62	+0.3
2,850,616	+		Echvi_2407	0.66	-3.4
2,850,616	+		Echvi_2407	0.66	-0.9
2,850,638	-		Echvi_2407	0.69	-1.9
2,850,705	+		Echvi_2407	0.78	-0.9
2,850,706	-		Echvi_2407	0.78	+1.4
2,850,738	+		Echvi_2407	0.82	+0.2
2,850,791	-		Echvi_2407	0.89	-1.5
2,850,799	+		Echvi_2407	0.90	+0.3
2,850,799	+				+1.2
2,850,799	+		Echvi_2407	0.90	+0.2
2,850,800	-		Echvi_2407	0.90	+0.1
2,850,810	-				-0.3
2,850,811	+				-1.6
2,850,811	+				+1.2
2,850,831	+				-1.1
2,850,831	+				-0.2
2,850,831	+				+0.2
2,850,832	-				+1.1
2,850,869	-				+0.6