Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2021

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,376,274	-				-0.9
2,376,274	-				-0.2
2,376,274	-				+1.7
2,376,274	-				-1.7
2,376,276	-				+0.2
2,376,318	-				+2.2
2,376,318	-				+0.8
2,376,398	+				-0.8
2,376,411	-				-2.0
2,376,423	+				+1.2
2,376,465	+				+0.7
2,376,465	+				+0.4
2,376,466	-				+0.2
2,376,466	-				-0.2
2,376,467	+				+0.5
2,376,467	+				+0.7
2,376,468	-				-0.2
2,376,468	-				+2.1
2,376,468	-				-1.5
2,376,468	-				+1.2
2,376,522	+				+0.7
2,376,523	-				+0.9
2,376,636	-				+1.0
2,376,650	-				-1.6
2,376,658	-				-0.6
2,376,690	-				-1.5
2,376,690	-				+0.0
2,376,691	+				+1.5
2,376,692	-				+0.5
2,376,901	-				+0.6
2,376,928	+				-2.2
2,376,971	+				-0.7
2,376,971	+				+0.2
2,376,972	-				-1.2
2,376,973	+				-1.8
2,376,974	-				-0.8
2,376,974	-				-0.3
2,376,988	+				+1.3
2,376,989	-				-2.6
2,376,989	-				-1.2
2,376,989	-				-0.4
2,376,989	-				-0.5
2,376,990	+				-1.3
2,376,990	+				+0.6
2,377,045	+				+0.9
2,377,113	-		Echvi_2021	0.12	-1.9
2,377,123	+		Echvi_2021	0.12	-1.3
2,377,175	+		Echvi_2021	0.15	+1.1
2,377,175	+		Echvi_2021	0.15	-0.3
2,377,175	+		Echvi_2021	0.15	-0.4
2,377,175	+		Echvi_2021	0.15	-0.8
2,377,176	-		Echvi_2021	0.15	-0.6
2,377,199	+		Echvi_2021	0.16	-0.3
2,377,199	+		Echvi_2021	0.16	-0.8
2,377,199	+		Echvi_2021	0.16	+0.4
2,377,199	+		Echvi_2021	0.16	-0.8
2,377,199	+		Echvi_2021	0.16	+0.4
2,377,199	+		Echvi_2021	0.16	+0.2
2,377,199	+		Echvi_2021	0.16	-0.5
2,377,200	-		Echvi_2021	0.16	-0.3
2,377,200	-		Echvi_2021	0.16	-0.8
2,377,277	+		Echvi_2021	0.19	-0.9
2,377,364	+		Echvi_2021	0.23	-0.8
2,377,445	+		Echvi_2021	0.27	-1.8
2,377,445	+		Echvi_2021	0.27	+0.5
2,377,445	+		Echvi_2021	0.27	-0.1
2,377,446	-		Echvi_2021	0.27	-0.9
2,377,446	-		Echvi_2021	0.27	-2.1
2,377,512	-		Echvi_2021	0.30	-0.8
2,377,513	+		Echvi_2021	0.30	+1.2
2,377,568	+		Echvi_2021	0.33	-2.6
2,377,574	-		Echvi_2021	0.33	+1.0
2,377,679	+		Echvi_2021	0.38	+1.2
2,377,703	-		Echvi_2021	0.39	-0.6
2,377,703	-		Echvi_2021	0.39	-0.4
2,377,703	-		Echvi_2021	0.39	-3.2
2,377,703	-		Echvi_2021	0.39	-0.7
2,377,803	-		Echvi_2021	0.44	-1.3
2,377,845	+		Echvi_2021	0.46	-0.7
2,377,856	+		Echvi_2021	0.46	+0.4
2,377,887	-		Echvi_2021	0.47	-0.6
2,377,892	+		Echvi_2021	0.48	+1.7
2,377,892	+		Echvi_2021	0.48	-0.1
2,378,014	+		Echvi_2021	0.53	+0.4
2,378,095	+		Echvi_2021	0.57	-0.8
2,378,237	+		Echvi_2021	0.64	+0.1
2,378,237	+		Echvi_2021	0.64	+0.4
2,378,301	+		Echvi_2021	0.67	+1.2
2,378,516	-		Echvi_2021	0.76	-0.9
2,378,570	+		Echvi_2021	0.79	-1.6
2,378,621	+		Echvi_2021	0.81	+0.2
2,378,621	+		Echvi_2021	0.81	+0.5
2,378,621	+		Echvi_2021	0.81	-1.1
2,378,622	-		Echvi_2021	0.81	-0.1
2,378,622	-		Echvi_2021	0.81	-2.8
2,378,624	+		Echvi_2021	0.81	+0.1
2,378,624	+		Echvi_2021	0.81	-1.1
2,378,624	+		Echvi_2021	0.81	-1.0
2,378,625	-		Echvi_2021	0.82	+1.2
2,378,625	-		Echvi_2021	0.82	-1.2
2,378,625	-		Echvi_2021	0.82	-0.3
2,378,625	-		Echvi_2021	0.82	-1.1
2,378,625	-		Echvi_2021	0.82	-0.2
2,378,734	+		Echvi_2021	0.87	+0.7
2,378,747	+		Echvi_2021	0.87	+0.3
2,378,747	+		Echvi_2021	0.87	+0.2
2,378,861	+				+0.5
2,378,861	+				-0.9
2,378,957	+				-1.6
2,378,957	+				-0.3
2,378,957	+				-1.5
2,378,958	-				+1.2
2,378,958	-				-2.1
2,379,002	+				-2.9
2,379,030	-				-1.1
2,379,030	-				+0.0
2,379,032	-				-0.7
2,379,032	-				+0.1
2,379,032	-				-0.6
2,379,032	-				+1.8
2,379,039	-				+0.1
2,379,039	-				-1.3
2,379,039	-				+1.2
2,379,050	+				-0.1
2,379,051	-				-0.1
2,379,051	-				+0.5
2,379,094	+				+0.2
2,379,095	-				+0.9
2,379,123	+				-0.9
2,379,123	+				+0.4
2,379,124	-				-0.4
2,379,152	+				-0.1
2,379,158	+				+0.8
2,379,158	+				+2.2
2,379,159	-				-0.1
2,379,246	-				-0.1
2,379,248	-				+1.2
2,379,312	+		Echvi_2022	0.14	+0.2
2,379,312	+		Echvi_2022	0.14	-0.7
2,379,312	+		Echvi_2022	0.14	-1.4
2,379,313	-		Echvi_2022	0.14	-1.2
2,379,313	-		Echvi_2022	0.14	-0.3
2,379,344	+		Echvi_2022	0.17	+0.6
2,379,344	+		Echvi_2022	0.17	-0.9
2,379,344	+		Echvi_2022	0.17	+0.8
2,379,344	+		Echvi_2022	0.17	+1.2
2,379,344	+		Echvi_2022	0.17	+1.0
2,379,345	-		Echvi_2022	0.17	+0.7
2,379,347	+		Echvi_2022	0.17	-0.9
2,379,353	+		Echvi_2022	0.17	-1.3
2,379,357	+		Echvi_2022	0.18	+0.1
2,379,368	+		Echvi_2022	0.19	+0.4
2,379,368	+		Echvi_2022	0.19	-1.1
2,379,394	-		Echvi_2022	0.21	-0.8
2,379,394	-		Echvi_2022	0.21	-0.1
2,379,441	-		Echvi_2022	0.25	+1.2
2,379,446	+		Echvi_2022	0.26	+0.2
2,379,447	-		Echvi_2022	0.26	+0.1
2,379,450	-		Echvi_2022	0.26	+0.4
2,379,474	-		Echvi_2022	0.29	+0.2
2,379,516	-		Echvi_2022	0.32	-0.3
2,379,570	-		Echvi_2022	0.37	-0.2
2,379,592	+		Echvi_2022	0.39	+0.2
2,379,662	-		Echvi_2022	0.46	+1.2
2,379,722	+		Echvi_2022	0.51	-1.7
2,379,729	-		Echvi_2022	0.52	-1.4
2,379,731	+		Echvi_2022	0.52	-0.4
2,379,757	+		Echvi_2022	0.55	+0.5
2,379,763	+		Echvi_2022	0.55	+1.8
2,379,773	-		Echvi_2022	0.56	-1.0
2,379,821	-		Echvi_2022	0.61	-0.7
2,379,834	+		Echvi_2022	0.62	-1.2
2,379,865	+		Echvi_2022	0.65	-0.4
2,379,866	-		Echvi_2022	0.65	-0.1
2,379,886	-		Echvi_2022	0.67	-1.0
2,379,886	-		Echvi_2022	0.67	-0.0
2,379,915	+		Echvi_2022	0.69	-0.2
2,379,916	-		Echvi_2022	0.69	+0.0
2,379,916	-		Echvi_2022	0.69	+0.2
2,380,010	+		Echvi_2022	0.78	+0.2