Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0877

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,001,589	+		Echvi_0876	0.71	+0.6
1,001,642	+		Echvi_0876	0.73	-1.8
1,001,642	+		Echvi_0876	0.73	+0.1
1,001,643	-		Echvi_0876	0.73	+3.3
1,001,643	-		Echvi_0876	0.73	+0.5
1,001,728	+		Echvi_0876	0.76	-0.4
1,001,729	-		Echvi_0876	0.76	-0.1
1,001,729	-		Echvi_0876	0.76	+1.0
1,001,825	+		Echvi_0876	0.79	-0.7
1,001,860	-		Echvi_0876	0.80	+1.0
1,001,951	+		Echvi_0876	0.83	-1.4
1,001,952	-		Echvi_0876	0.83	-0.4
1,001,996	+		Echvi_0876	0.84	-1.0
1,002,046	-		Echvi_0876	0.86	-0.4
1,002,127	+		Echvi_0876	0.88	-0.2
1,002,128	-		Echvi_0876	0.88	-0.4
1,002,128	-		Echvi_0876	0.88	+2.9
1,002,131	+		Echvi_0876	0.88	-1.5
1,002,131	+		Echvi_0876	0.88	+1.0
1,002,131	+		Echvi_0876	0.88	+0.4
1,002,132	-		Echvi_0876	0.89	-1.1
1,002,149	+		Echvi_0876	0.89	+0.1
1,002,150	-		Echvi_0876	0.89	+0.4
1,002,213	+				+0.3
1,002,214	-				+0.7
1,002,229	-				-0.4
1,002,290	+				-0.6
1,002,291	-				-1.6
1,002,490	-				+2.3
1,002,530	+				+0.6
1,002,531	-				-1.1
1,002,574	+				-0.1
1,002,575	-				+1.3
1,002,575	-				-0.3
1,002,575	-				+0.3
1,002,678	+				-0.1
1,002,678	+				+0.5
1,002,678	+				-1.3
1,002,678	+				+0.4
1,002,679	-				-0.7
1,002,697	+				+0.7
1,002,697	+				-1.1
1,002,727	+		Echvi_0877	0.12	-0.9
1,002,727	+		Echvi_0877	0.12	-1.3
1,002,728	-		Echvi_0877	0.12	-2.3
1,002,728	-		Echvi_0877	0.12	+2.1
1,002,728	-		Echvi_0877	0.12	-1.2
1,002,731	-		Echvi_0877	0.12	-0.6
1,002,731	-		Echvi_0877	0.12	+1.1
1,003,135	+		Echvi_0877	0.39	+0.7
1,003,136	-		Echvi_0877	0.39	+0.0
1,003,136	-		Echvi_0877	0.39	-1.7
1,003,137	+		Echvi_0877	0.39	+0.9
1,003,138	-		Echvi_0877	0.39	+0.7
1,003,181	+		Echvi_0877	0.42	+0.3
1,003,181	+		Echvi_0877	0.42	-0.9
1,003,181	+		Echvi_0877	0.42	+0.6
1,003,181	+		Echvi_0877	0.42	-1.3
1,003,181	+		Echvi_0877	0.42	+0.3
1,003,182	-		Echvi_0877	0.42	-0.6
1,003,182	-		Echvi_0877	0.42	-0.4
1,003,182	-		Echvi_0877	0.42	+0.4
1,003,182	-		Echvi_0877	0.42	-0.7
1,003,182	-		Echvi_0877	0.42	-0.6
1,003,182	-		Echvi_0877	0.42	-0.3
1,003,187	+		Echvi_0877	0.43	+1.8
1,003,195	-		Echvi_0877	0.43	+0.5
1,003,251	-				+2.3
1,003,251	-		Echvi_0877	0.47	-2.3
1,003,251	-		Echvi_0877	0.47	+2.3
1,003,278	+		Echvi_0877	0.49	-1.2
1,003,281	+		Echvi_0877	0.49	+1.9
1,003,282	-		Echvi_0877	0.49	-0.5
1,003,332	+		Echvi_0877	0.52	+0.5
1,003,371	+		Echvi_0877	0.55	-1.5
1,003,371	+		Echvi_0877	0.55	-1.4
1,003,372	-		Echvi_0877	0.55	-0.1
1,003,486	+		Echvi_0877	0.63	-1.7
1,003,486	+		Echvi_0877	0.63	+0.8
1,003,487	-		Echvi_0877	0.63	-0.7
1,003,487	-		Echvi_0877	0.63	-1.2
1,003,527	-		Echvi_0877	0.66	-1.4
1,003,571	-		Echvi_0877	0.68	+2.3
1,003,572	+		Echvi_0877	0.69	+0.2
1,003,648	+		Echvi_0877	0.74	+1.1
1,003,648	+		Echvi_0877	0.74	+0.4
1,003,649	-		Echvi_0877	0.74	-1.0
1,003,737	+		Echvi_0877	0.80	+0.3
1,003,738	-		Echvi_0877	0.80	+0.4
1,003,756	-		Echvi_0877	0.81	+0.0
1,003,816	+		Echvi_0877	0.85	+0.1
1,003,821	+		Echvi_0877	0.85	-0.2
1,003,821	+		Echvi_0877	0.85	+0.1
1,003,821	+		Echvi_0877	0.85	+0.6
1,003,822	-		Echvi_0877	0.85	+0.3
1,003,822	-		Echvi_0877	0.85	-1.6
1,003,822	-		Echvi_0877	0.85	-0.3
1,003,822	-		Echvi_0877	0.85	+0.0
1,003,822	-		Echvi_0877	0.85	-0.2
1,003,825	+		Echvi_0877	0.85	-0.6
1,003,825	+		Echvi_0877	0.85	-0.4
1,003,825	+		Echvi_0877	0.85	+0.4
1,003,826	-		Echvi_0877	0.86	-0.6
1,003,826	-		Echvi_0877	0.86	-2.2
1,003,826	-		Echvi_0877	0.86	-0.6
1,003,826	-		Echvi_0877	0.86	-0.0
1,003,826	-		Echvi_0877	0.86	-0.8
1,003,829	-		Echvi_0877	0.86	-0.7
1,003,856	-		Echvi_0877	0.88	-1.9
1,003,857	+		Echvi_0877	0.88	-0.1
1,003,858	-		Echvi_0877	0.88	-0.6
1,003,858	-		Echvi_0877	0.88	+0.5
1,003,858	-		Echvi_0877	0.88	+0.1
1,003,858	-		Echvi_0877	0.88	-1.5
1,003,866	+		Echvi_0877	0.88	+0.6
1,003,866	+		Echvi_0877	0.88	+0.1
1,003,944	+				-0.7
1,003,944	+				+0.4
1,003,945	-				-2.5
1,003,945	-				-0.7
1,003,945	-				-0.3
1,003,978	-				+0.7
1,004,047	+				+0.7
1,004,047	+				+0.7
1,004,132	-		Echvi_0878	0.13	-1.3
1,004,155	+		Echvi_0878	0.17	-2.2
1,004,156	-		Echvi_0878	0.17	+0.5
1,004,161	-		Echvi_0878	0.18	-1.1
1,004,306	+		Echvi_0878	0.40	-0.6
1,004,386	+		Echvi_0878	0.52	-0.2
1,004,386	+		Echvi_0878	0.52	-1.3
1,004,386	+		Echvi_0878	0.52	+0.9
1,004,497	+		Echvi_0878	0.69	+0.5
1,004,497	+		Echvi_0878	0.69	+1.8
1,004,497	+		Echvi_0878	0.69	-0.7
1,004,497	+		Echvi_0878	0.69	-0.9
1,004,498	-		Echvi_0878	0.69	-0.1
1,004,551	+		Echvi_0878	0.78	+0.7
1,004,564	+		Echvi_0878	0.80	+0.9
1,004,581	+		Echvi_0878	0.82	-1.7
1,004,581	+		Echvi_0878	0.82	-1.2
1,004,582	-		Echvi_0878	0.82	+0.2
1,004,582	-		Echvi_0878	0.82	-2.6
1,004,762	+				-0.5
1,004,762	+				+0.5
1,004,763	-				-0.6
1,004,764	+				-1.4
1,004,784	-				-0.4
1,004,840	+				-0.9
1,004,849	-				-0.4
1,004,849	-				-2.5
1,004,849	-				-0.6
1,004,893	+				-0.8
1,004,893	+				+1.4
1,004,894	-				+2.1
1,004,906	-				-2.3
1,004,908	-				-0.5
1,004,938	+				-0.2
1,005,014	-				-0.4
1,005,014	-				-0.1
1,005,015	+				+0.9
1,005,015	+				+0.0
1,005,015	+				-1.7
1,005,015	+				-1.9
1,005,015	+				-1.1
1,005,016	-				-0.8
1,005,016	-				-0.5
1,005,016	-				+1.7
1,005,016	-				-0.1
1,005,016	-				-0.5
1,005,016	-				+0.5
1,005,016	-				-0.3
1,005,016	-				+0.3
1,005,016	-				+1.2