Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1732

Experiment: m.b. acetate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1731 and B158DRAFT_1732 are separated by 90 nucleotidesB158DRAFT_1732 and B158DRAFT_1733 are separated by 128 nucleotidesB158DRAFT_1733 and B158DRAFT_1734 are separated by 179 nucleotides B158DRAFT_1731: B158DRAFT_1731 - Small-conductance mechanosensitive channel, at 1,806,526 to 1,807,527 _1731 B158DRAFT_1732: B158DRAFT_1732 - C-terminal peptidase (prc), at 1,807,618 to 1,809,801 _1732 B158DRAFT_1733: B158DRAFT_1733 - hypothetical protein, at 1,809,930 to 1,810,226 _1733 B158DRAFT_1734: B158DRAFT_1734 - Acyl-CoA dehydrogenases, at 1,810,406 to 1,811,584 _1734 Position (kb) 1807 1808 1809 1810Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 1806.620 kb on - strandat 1806.736 kb on + strand, within B158DRAFT_1731at 1806.736 kb on + strand, within B158DRAFT_1731at 1806.736 kb on + strand, within B158DRAFT_1731at 1806.736 kb on + strand, within B158DRAFT_1731at 1806.744 kb on - strand, within B158DRAFT_1731at 1806.744 kb on - strand, within B158DRAFT_1731at 1806.744 kb on - strand, within B158DRAFT_1731at 1806.744 kb on - strand, within B158DRAFT_1731at 1806.744 kb on - strand, within B158DRAFT_1731at 1806.765 kb on + strand, within B158DRAFT_1731at 1806.773 kb on + strand, within B158DRAFT_1731at 1806.773 kb on + strand, within B158DRAFT_1731at 1806.773 kb on + strand, within B158DRAFT_1731at 1806.791 kb on - strand, within B158DRAFT_1731at 1806.836 kb on - strand, within B158DRAFT_1731at 1807.017 kb on - strand, within B158DRAFT_1731at 1807.159 kb on - strand, within B158DRAFT_1731at 1807.237 kb on - strand, within B158DRAFT_1731at 1807.249 kb on + strand, within B158DRAFT_1731at 1807.249 kb on + strand, within B158DRAFT_1731at 1807.257 kb on - strand, within B158DRAFT_1731at 1807.431 kb on + strandat 1807.431 kb on + strandat 1807.431 kb on + strandat 1807.529 kb on + strandat 1807.748 kb on - strandat 1807.803 kb on + strandat 1807.803 kb on - strandat 1807.811 kb on - strandat 1807.812 kb on + strandat 1807.981 kb on + strand, within B158DRAFT_1732at 1808.006 kb on - strand, within B158DRAFT_1732at 1808.371 kb on + strand, within B158DRAFT_1732at 1808.395 kb on - strand, within B158DRAFT_1732at 1808.426 kb on - strand, within B158DRAFT_1732at 1808.460 kb on + strand, within B158DRAFT_1732at 1808.475 kb on - strand, within B158DRAFT_1732at 1808.537 kb on + strand, within B158DRAFT_1732at 1808.550 kb on - strand, within B158DRAFT_1732at 1808.592 kb on + strand, within B158DRAFT_1732at 1808.689 kb on + strand, within B158DRAFT_1732at 1808.774 kb on + strand, within B158DRAFT_1732at 1808.774 kb on + strand, within B158DRAFT_1732at 1808.782 kb on - strand, within B158DRAFT_1732at 1808.823 kb on + strand, within B158DRAFT_1732at 1808.893 kb on + strand, within B158DRAFT_1732at 1808.893 kb on + strand, within B158DRAFT_1732at 1808.944 kb on + strand, within B158DRAFT_1732at 1808.947 kb on - strand, within B158DRAFT_1732at 1808.949 kb on + strand, within B158DRAFT_1732at 1808.952 kb on - strand, within B158DRAFT_1732at 1809.024 kb on + strand, within B158DRAFT_1732at 1809.039 kb on + strand, within B158DRAFT_1732at 1809.075 kb on + strand, within B158DRAFT_1732at 1809.075 kb on + strand, within B158DRAFT_1732at 1809.075 kb on + strand, within B158DRAFT_1732at 1809.216 kb on + strand, within B158DRAFT_1732at 1809.237 kb on + strand, within B158DRAFT_1732at 1809.239 kb on - strand, within B158DRAFT_1732at 1809.300 kb on - strand, within B158DRAFT_1732at 1809.375 kb on + strand, within B158DRAFT_1732at 1809.383 kb on - strand, within B158DRAFT_1732at 1809.428 kb on - strand, within B158DRAFT_1732at 1809.463 kb on - strand, within B158DRAFT_1732at 1809.463 kb on - strand, within B158DRAFT_1732at 1809.501 kb on - strand, within B158DRAFT_1732at 1809.587 kb on + strandat 1809.802 kb on + strandat 1809.802 kb on + strandat 1809.847 kb on + strandat 1809.882 kb on + strandat 1809.892 kb on + strandat 1809.892 kb on + strandat 1809.996 kb on - strand, within B158DRAFT_1733at 1810.000 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.054 kb on + strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.062 kb on - strand, within B158DRAFT_1733at 1810.082 kb on - strand, within B158DRAFT_1733at 1810.151 kb on - strand, within B158DRAFT_1733at 1810.180 kb on - strand, within B158DRAFT_1733at 1810.212 kb on + strandat 1810.270 kb on - strandat 1810.307 kb on - strandat 1810.432 kb on + strandat 1810.488 kb on + strandat 1810.677 kb on + strand, within B158DRAFT_1734at 1810.780 kb on + strand, within B158DRAFT_1734at 1810.790 kb on + strand, within B158DRAFT_1734

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. acetate 150 mM
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1,806,620 - -0.5
1,806,736 + B158DRAFT_1731 0.21 -0.0
1,806,736 + B158DRAFT_1731 0.21 -0.4
1,806,736 + B158DRAFT_1731 0.21 -0.2
1,806,736 + B158DRAFT_1731 0.21 +0.6
1,806,744 - B158DRAFT_1731 0.22 -0.4
1,806,744 - B158DRAFT_1731 0.22 -0.1
1,806,744 - B158DRAFT_1731 0.22 +0.2
1,806,744 - B158DRAFT_1731 0.22 +0.0
1,806,744 - B158DRAFT_1731 0.22 -0.3
1,806,765 + B158DRAFT_1731 0.24 -0.0
1,806,773 + B158DRAFT_1731 0.25 -0.2
1,806,773 + B158DRAFT_1731 0.25 +0.2
1,806,773 + B158DRAFT_1731 0.25 -0.7
1,806,791 - B158DRAFT_1731 0.26 +0.1
1,806,836 - B158DRAFT_1731 0.31 +0.1
1,807,017 - B158DRAFT_1731 0.49 -0.2
1,807,159 - B158DRAFT_1731 0.63 -0.8
1,807,237 - B158DRAFT_1731 0.71 +0.2
1,807,249 + B158DRAFT_1731 0.72 -0.5
1,807,249 + B158DRAFT_1731 0.72 +0.2
1,807,257 - B158DRAFT_1731 0.73 -0.1
1,807,431 + -0.7
1,807,431 + +0.3
1,807,431 + -0.1
1,807,529 + +0.5
1,807,748 - -3.4
1,807,803 + -0.7
1,807,803 - -4.4
1,807,811 - -3.0
1,807,812 + -1.8
1,807,981 + B158DRAFT_1732 0.17 -6.2
1,808,006 - B158DRAFT_1732 0.18 -3.5
1,808,371 + B158DRAFT_1732 0.34 -4.3
1,808,395 - B158DRAFT_1732 0.36 -2.3
1,808,426 - B158DRAFT_1732 0.37 -2.2
1,808,460 + B158DRAFT_1732 0.39 -3.1
1,808,475 - B158DRAFT_1732 0.39 -3.7
1,808,537 + B158DRAFT_1732 0.42 -0.9
1,808,550 - B158DRAFT_1732 0.43 -3.4
1,808,592 + B158DRAFT_1732 0.45 -0.9
1,808,689 + B158DRAFT_1732 0.49 -2.1
1,808,774 + B158DRAFT_1732 0.53 -3.4
1,808,774 + B158DRAFT_1732 0.53 -4.1
1,808,782 - B158DRAFT_1732 0.53 -3.6
1,808,823 + B158DRAFT_1732 0.55 -2.6
1,808,893 + B158DRAFT_1732 0.58 -2.9
1,808,893 + B158DRAFT_1732 0.58 -3.0
1,808,944 + B158DRAFT_1732 0.61 -3.0
1,808,947 - B158DRAFT_1732 0.61 -5.2
1,808,949 + B158DRAFT_1732 0.61 -5.2
1,808,952 - B158DRAFT_1732 0.61 -2.9
1,809,024 + B158DRAFT_1732 0.64 -3.1
1,809,039 + B158DRAFT_1732 0.65 -2.4
1,809,075 + B158DRAFT_1732 0.67 -2.5
1,809,075 + B158DRAFT_1732 0.67 -0.9
1,809,075 + B158DRAFT_1732 0.67 -1.9
1,809,216 + B158DRAFT_1732 0.73 -4.4
1,809,237 + B158DRAFT_1732 0.74 -4.1
1,809,239 - B158DRAFT_1732 0.74 -0.7
1,809,300 - B158DRAFT_1732 0.77 -2.4
1,809,375 + B158DRAFT_1732 0.80 -4.1
1,809,383 - B158DRAFT_1732 0.81 -2.4
1,809,428 - B158DRAFT_1732 0.83 -4.9
1,809,463 - B158DRAFT_1732 0.84 -5.0
1,809,463 - B158DRAFT_1732 0.84 -3.8
1,809,501 - B158DRAFT_1732 0.86 -3.0
1,809,587 + -3.9
1,809,802 + -1.4
1,809,802 + -3.4
1,809,847 + -2.1
1,809,882 + -3.2
1,809,892 + -2.3
1,809,892 + -2.7
1,809,996 - B158DRAFT_1733 0.22 -0.3
1,810,000 + B158DRAFT_1733 0.24 +0.6
1,810,054 + B158DRAFT_1733 0.42 -0.7
1,810,054 + B158DRAFT_1733 0.42 -0.4
1,810,054 + B158DRAFT_1733 0.42 -0.5
1,810,054 + B158DRAFT_1733 0.42 -0.8
1,810,054 + B158DRAFT_1733 0.42 +0.1
1,810,054 + B158DRAFT_1733 0.42 -0.5
1,810,054 + B158DRAFT_1733 0.42 -0.4
1,810,054 + B158DRAFT_1733 0.42 -1.6
1,810,054 + B158DRAFT_1733 0.42 -0.1
1,810,054 + B158DRAFT_1733 0.42 -0.7
1,810,054 + B158DRAFT_1733 0.42 -0.5
1,810,054 + B158DRAFT_1733 0.42 -0.5
1,810,054 + B158DRAFT_1733 0.42 -0.5
1,810,054 + B158DRAFT_1733 0.42 -0.0
1,810,062 - B158DRAFT_1733 0.44 -2.1
1,810,062 - B158DRAFT_1733 0.44 -0.1
1,810,062 - B158DRAFT_1733 0.44 -0.5
1,810,062 - B158DRAFT_1733 0.44 -0.3
1,810,062 - B158DRAFT_1733 0.44 +0.4
1,810,062 - B158DRAFT_1733 0.44 -0.3
1,810,062 - B158DRAFT_1733 0.44 -0.4
1,810,062 - B158DRAFT_1733 0.44 -0.1
1,810,062 - B158DRAFT_1733 0.44 -0.4
1,810,062 - B158DRAFT_1733 0.44 -0.6
1,810,062 - B158DRAFT_1733 0.44 -0.2
1,810,062 - B158DRAFT_1733 0.44 +0.0
1,810,062 - B158DRAFT_1733 0.44 -0.2
1,810,082 - B158DRAFT_1733 0.51 +0.2
1,810,151 - B158DRAFT_1733 0.74 +0.6
1,810,180 - B158DRAFT_1733 0.84 -0.0
1,810,212 + -0.1
1,810,270 - -0.1
1,810,307 - +0.7
1,810,432 + -1.7
1,810,488 + -2.8
1,810,677 + B158DRAFT_1734 0.23 -2.2
1,810,780 + B158DRAFT_1734 0.32 -1.7
1,810,790 + B158DRAFT_1734 0.33 -0.9

Or see this region's nucleotide sequence