Experiment: m.b. acetate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1290 and B158DRAFT_1291 are separated by 64 nucleotides B158DRAFT_1291 and B158DRAFT_1292 are separated by 47 nucleotides
B158DRAFT_1290: B158DRAFT_1290 - Predicted protease with the C-terminal PDZ domain, at 1,334,095 to 1,335,924
_1290
B158DRAFT_1291: B158DRAFT_1291 - exodeoxyribonuclease III, at 1,335,989 to 1,336,804
_1291
B158DRAFT_1292: B158DRAFT_1292 - hypothetical protein, at 1,336,852 to 1,340,016
_1292
Position (kb)
1335
1336
1337 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1335.009 kb on + strand, within B158DRAFT_1290 at 1335.015 kb on + strand, within B158DRAFT_1290 at 1335.015 kb on + strand, within B158DRAFT_1290 at 1335.015 kb on + strand, within B158DRAFT_1290 at 1335.015 kb on + strand, within B158DRAFT_1290 at 1335.020 kb on + strand, within B158DRAFT_1290 at 1335.023 kb on - strand, within B158DRAFT_1290 at 1335.025 kb on + strand, within B158DRAFT_1290 at 1335.030 kb on + strand, within B158DRAFT_1290 at 1335.030 kb on + strand, within B158DRAFT_1290 at 1335.030 kb on + strand, within B158DRAFT_1290 at 1335.033 kb on - strand, within B158DRAFT_1290 at 1335.038 kb on - strand, within B158DRAFT_1290 at 1335.046 kb on + strand, within B158DRAFT_1290 at 1335.078 kb on + strand, within B158DRAFT_1290 at 1335.137 kb on + strand, within B158DRAFT_1290 at 1335.140 kb on + strand, within B158DRAFT_1290 at 1335.142 kb on + strand, within B158DRAFT_1290 at 1335.219 kb on + strand, within B158DRAFT_1290 at 1335.255 kb on + strand, within B158DRAFT_1290 at 1335.255 kb on + strand, within B158DRAFT_1290 at 1335.263 kb on - strand, within B158DRAFT_1290 at 1335.286 kb on + strand, within B158DRAFT_1290 at 1335.356 kb on + strand, within B158DRAFT_1290 at 1335.365 kb on + strand, within B158DRAFT_1290 at 1335.366 kb on + strand, within B158DRAFT_1290 at 1335.374 kb on - strand, within B158DRAFT_1290 at 1335.374 kb on - strand, within B158DRAFT_1290 at 1335.468 kb on + strand, within B158DRAFT_1290 at 1335.494 kb on - strand, within B158DRAFT_1290 at 1335.494 kb on - strand, within B158DRAFT_1290 at 1335.564 kb on + strand, within B158DRAFT_1290 at 1335.567 kb on - strand, within B158DRAFT_1290 at 1335.631 kb on - strand, within B158DRAFT_1290 at 1335.837 kb on + strand at 1336.034 kb on + strand at 1336.042 kb on - strand at 1336.116 kb on + strand, within B158DRAFT_1291 at 1336.116 kb on + strand, within B158DRAFT_1291 at 1336.198 kb on + strand, within B158DRAFT_1291 at 1336.449 kb on + strand, within B158DRAFT_1291 at 1336.449 kb on + strand, within B158DRAFT_1291 at 1336.596 kb on - strand, within B158DRAFT_1291 at 1336.620 kb on + strand, within B158DRAFT_1291 at 1336.696 kb on - strand, within B158DRAFT_1291 at 1336.705 kb on + strand, within B158DRAFT_1291 at 1336.706 kb on - strand, within B158DRAFT_1291 at 1336.713 kb on - strand, within B158DRAFT_1291 at 1336.810 kb on + strand at 1336.880 kb on - strand at 1336.892 kb on - strand at 1337.000 kb on + strand at 1337.008 kb on - strand at 1337.093 kb on + strand at 1337.101 kb on - strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.133 kb on + strand at 1337.141 kb on - strand at 1337.141 kb on - strand at 1337.228 kb on + strand, within B158DRAFT_1292 at 1337.231 kb on - strand, within B158DRAFT_1292 at 1337.231 kb on - strand, within B158DRAFT_1292 at 1337.510 kb on + strand, within B158DRAFT_1292 at 1337.518 kb on - strand, within B158DRAFT_1292 at 1337.544 kb on + strand, within B158DRAFT_1292 at 1337.601 kb on - strand, within B158DRAFT_1292 at 1337.603 kb on + strand, within B158DRAFT_1292 at 1337.685 kb on + strand, within B158DRAFT_1292 at 1337.716 kb on + strand, within B158DRAFT_1292
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 150 mM remove 1,335,009 + B158DRAFT_1290 0.50 -1.8 1,335,015 + B158DRAFT_1290 0.50 +0.1 1,335,015 + B158DRAFT_1290 0.50 -0.3 1,335,015 + B158DRAFT_1290 0.50 -0.3 1,335,015 + B158DRAFT_1290 0.50 -0.5 1,335,020 + B158DRAFT_1290 0.51 +0.4 1,335,023 - B158DRAFT_1290 0.51 -0.3 1,335,025 + B158DRAFT_1290 0.51 -0.1 1,335,030 + B158DRAFT_1290 0.51 -0.5 1,335,030 + B158DRAFT_1290 0.51 -0.6 1,335,030 + B158DRAFT_1290 0.51 -0.2 1,335,033 - B158DRAFT_1290 0.51 +0.0 1,335,038 - B158DRAFT_1290 0.52 -0.5 1,335,046 + B158DRAFT_1290 0.52 +0.4 1,335,078 + B158DRAFT_1290 0.54 -0.6 1,335,137 + B158DRAFT_1290 0.57 +0.0 1,335,140 + B158DRAFT_1290 0.57 -0.3 1,335,142 + B158DRAFT_1290 0.57 +0.0 1,335,219 + B158DRAFT_1290 0.61 -0.8 1,335,255 + B158DRAFT_1290 0.63 -0.2 1,335,255 + B158DRAFT_1290 0.63 -0.1 1,335,263 - B158DRAFT_1290 0.64 -0.2 1,335,286 + B158DRAFT_1290 0.65 -0.5 1,335,356 + B158DRAFT_1290 0.69 -0.1 1,335,365 + B158DRAFT_1290 0.69 +0.4 1,335,366 + B158DRAFT_1290 0.69 +0.1 1,335,374 - B158DRAFT_1290 0.70 -0.7 1,335,374 - B158DRAFT_1290 0.70 -0.1 1,335,468 + B158DRAFT_1290 0.75 +0.1 1,335,494 - B158DRAFT_1290 0.76 +0.3 1,335,494 - B158DRAFT_1290 0.76 +0.1 1,335,564 + B158DRAFT_1290 0.80 +0.0 1,335,567 - B158DRAFT_1290 0.80 -0.4 1,335,631 - B158DRAFT_1290 0.84 -0.6 1,335,837 + -0.6 1,336,034 + +0.5 1,336,042 - +0.1 1,336,116 + B158DRAFT_1291 0.16 +0.5 1,336,116 + B158DRAFT_1291 0.16 -0.5 1,336,198 + B158DRAFT_1291 0.26 -2.0 1,336,449 + B158DRAFT_1291 0.56 +0.3 1,336,449 + B158DRAFT_1291 0.56 -0.5 1,336,596 - B158DRAFT_1291 0.74 -0.5 1,336,620 + B158DRAFT_1291 0.77 -0.5 1,336,696 - B158DRAFT_1291 0.87 -0.5 1,336,705 + B158DRAFT_1291 0.88 -2.1 1,336,706 - B158DRAFT_1291 0.88 -0.4 1,336,713 - B158DRAFT_1291 0.89 +2.5 1,336,810 + -0.3 1,336,880 - -0.2 1,336,892 - -0.5 1,337,000 + -0.5 1,337,008 - -0.1 1,337,093 + -0.1 1,337,101 - -0.0 1,337,133 + -0.1 1,337,133 + -0.2 1,337,133 + -0.4 1,337,133 + -0.1 1,337,133 + -0.3 1,337,141 - +0.3 1,337,141 - -0.4 1,337,228 + B158DRAFT_1292 0.12 -0.0 1,337,231 - B158DRAFT_1292 0.12 -0.0 1,337,231 - B158DRAFT_1292 0.12 -0.2 1,337,510 + B158DRAFT_1292 0.21 -0.1 1,337,518 - B158DRAFT_1292 0.21 +0.4 1,337,544 + B158DRAFT_1292 0.22 +0.2 1,337,601 - B158DRAFT_1292 0.24 +0.2 1,337,603 + B158DRAFT_1292 0.24 -0.2 1,337,685 + B158DRAFT_1292 0.26 +0.1 1,337,716 + B158DRAFT_1292 0.27 +0.1
Or see this region's nucleotide sequence